Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10847
(758 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 164 1e-41
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 161 7e-41
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 136 3e-33
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 97 2e-21
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 82 7e-17
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 42 1e-04
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 38 0.002
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 29 0.54
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 28 1.3
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 28 1.7
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 27 2.2
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 27 2.2
SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomy... 27 2.9
SPAC328.02 |||Ariadne homolog|Schizosaccharomyces pombe|chr 1|||... 27 3.8
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 26 5.1
SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1 |Sc... 26 6.7
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 25 8.9
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 164 bits (398), Expect = 1e-41
Identities = 84/163 (51%), Positives = 103/163 (63%)
Frame = +2
Query: 257 GVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPA 436
GVMT LIKRN YSDNQPGVLIQVFEGERA TKD NLLGKFEL+GIPPA
Sbjct: 406 GVMTPLIKRNTTIPTKKSEIFSTYSDNQPGVLIQVFEGERARTKDCNLLGKFELSGIPPA 465
Query: 437 PRGVPQIEVTFDIDANGILNVSAIXXXXXXXXXXXXXXXKVVSPRKRSSVWLMRQRSTET 616
PRGVPQIEVTFD+DANGILNVSA+ K ++ + +
Sbjct: 466 PRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVAEAEKYKA 525
Query: 617 RMNKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTI 745
+ IQAKN LESY +S++++++D LK+K+ SDK+T+
Sbjct: 526 EDEAESGRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKETV 568
Score = 91.9 bits (218), Expect = 9e-20
Identities = 46/84 (54%), Positives = 55/84 (65%)
Frame = +3
Query: 3 DAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHG 182
D+K+DKA +++IVLVGGSTRIP+VQKL+ DFFNGKE KSINPDE +L G
Sbjct: 321 DSKVDKASVNEIVLVGGSTRIPRVQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAVLTG 380
Query: 183 DKSEEVQDXXXXXXXXXXXGIETA 254
D SE+ QD GIETA
Sbjct: 381 DTSEKTQDLLLLDVAPLSMGIETA 404
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 161 bits (392), Expect = 7e-41
Identities = 83/163 (50%), Positives = 102/163 (62%)
Frame = +2
Query: 257 GVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPA 436
GVMT LIKRN Y+DNQPGVLIQVFEGERA TKD NLLGKFEL+GIPPA
Sbjct: 406 GVMTPLIKRNTTIPTKKSEVFSTYADNQPGVLIQVFEGERARTKDCNLLGKFELSGIPPA 465
Query: 437 PRGVPQIEVTFDIDANGILNVSAIXXXXXXXXXXXXXXXKVVSPRKRSSVWLMRQRSTET 616
PRGVPQIEVTFD+DANGILNVSA+ K ++ + +
Sbjct: 466 PRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVSEAEKYKA 525
Query: 617 RMNKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTI 745
+ IQAKN LESY +S++++++D LK+K+ SDK+ I
Sbjct: 526 EDEAETSRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKEAI 568
Score = 90.2 bits (214), Expect = 3e-19
Identities = 45/84 (53%), Positives = 55/84 (65%)
Frame = +3
Query: 3 DAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHG 182
D+K+DK+ +++IVLVGGSTRIP++QKL+ DFFNGKE KSINPDE IL G
Sbjct: 321 DSKIDKSSVNEIVLVGGSTRIPRIQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAILVG 380
Query: 183 DKSEEVQDXXXXXXXXXXXGIETA 254
D SE+ QD GIETA
Sbjct: 381 DTSEKTQDLLLLDVAPLSLGIETA 404
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 136 bits (329), Expect = 3e-33
Identities = 75/167 (44%), Positives = 97/167 (58%), Gaps = 2/167 (1%)
Frame = +2
Query: 257 GVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPA 436
GVMT LI RN DNQ VLIQV+EGER +TKDNNLLGKF+L GIPPA
Sbjct: 435 GVMTKLIGRNTPIPTRKSQIFSTAVDNQNTVLIQVYEGERTLTKDNNLLGKFDLRGIPPA 494
Query: 437 PRGVPQIEVTFDIDANGILNVSAIXXXXXXXXXXXXXXXKVVSPRKRSSVWLMRQRSTET 616
PRGVPQIEVTF++DANG+L VSA+ + ++++
Sbjct: 495 PRGVPQIEVTFEVDANGVLTVSAVDKSGKGKPEKLVIKNDKGRLSEEDIERMVKEAEEFA 554
Query: 617 RMNK-QKETIQAKNALESYCFSMKSTM-EDEKLKEKISDSDKQTILD 751
+K KE I+A+N LE+Y +S+K +DE+L K+ DKQ +LD
Sbjct: 555 EEDKILKERIEARNTLENYAYSLKGQFDDDEQLGGKVDPEDKQAVLD 601
Score = 66.5 bits (155), Expect = 4e-12
Identities = 32/65 (49%), Positives = 44/65 (67%)
Frame = +3
Query: 3 DAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHG 182
D+ + K++I DIVLVGGSTRIPKVQ+LL+ FF GK+ +K INPDE +L G
Sbjct: 353 DSNLKKSEIDDIVLVGGSTRIPKVQELLESFF-GKKASKGINPDEAVAYGAAVQAGVLSG 411
Query: 183 DKSEE 197
++ +
Sbjct: 412 EEGSD 416
Score = 48.8 bits (111), Expect = 8e-07
Identities = 22/37 (59%), Positives = 28/37 (75%)
Frame = +1
Query: 523 KENKITITNDKGRLSKEEIERMVNEAEKYRNEDEQAK 633
K K+ I NDKGRLS+E+IERMV EAE++ ED+ K
Sbjct: 525 KPEKLVIKNDKGRLSEEDIERMVKEAEEFAEEDKILK 561
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 97.1 bits (231), Expect = 2e-21
Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 2/167 (1%)
Frame = +2
Query: 257 GVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPA 436
GV T LI RN +D Q V I+VF+GER + +DN L+G F+LTGI PA
Sbjct: 449 GVFTRLINRNTTIPTRKSQVFSTAADGQTAVEIRVFQGERELVRDNKLIGNFQLTGIAPA 508
Query: 437 PRGVPQIEVTFDIDANGILNVSAIXXXXXXXXXXXXXXXKVVSPRKRSSVWLMRQRSTET 616
P+G PQIEV+FD+DA+GI+NVSA ++ + ++ ++ +
Sbjct: 509 PKGQPQIEVSFDVDADGIINVSARDKATNKDSSITVAGSSGLTDSEIEAMVADAEKYRAS 568
Query: 617 RMNKQKETIQAKNALESYCFSMKSTME--DEKLKEKISDSDKQTILD 751
M +KE I+ N ES C ++S ++ +KL ++ + + I D
Sbjct: 569 DM-ARKEAIENGNRAESVCTDIESNLDIHKDKLDQQAVEDLRSKITD 614
Score = 47.2 bits (107), Expect = 3e-06
Identities = 27/83 (32%), Positives = 43/83 (51%)
Frame = +3
Query: 3 DAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHG 182
DA + ++I++++LVGG TR+P+V + ++ F +E KS+NPDE +L G
Sbjct: 369 DANLQTSEINEVILVGGMTRMPRVVETVKSIFK-REPAKSVNPDEAVAIGAAIQGGVLSG 427
Query: 183 DKSEEVQDXXXXXXXXXXXGIET 251
V+D GIET
Sbjct: 428 ----HVKDLVLLDVTPLSLGIET 446
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 82.2 bits (194), Expect = 7e-17
Identities = 45/141 (31%), Positives = 76/141 (53%), Gaps = 2/141 (1%)
Frame = +2
Query: 329 SDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAI 508
+DNQ V V++GER +N LG+F+LTGIPP PRG ++E TF++DANGIL V+A+
Sbjct: 435 ADNQTTVTFPVYQGERVNCAENEPLGEFQLTGIPPMPRGQAELEATFELDANGILKVTAV 494
Query: 509 XXXXXXXXXXXXXXXKVVSPRKRSSVWLMRQRSTETRMNKQ--KETIQAKNALESYCFSM 682
V + + M + + + + + + ++AK+ LESY ++
Sbjct: 495 --EKTTGRSAHIEITNSVGHLSSTKIQEMIENADKFKQQDKDFAKKLEAKSQLESYISNI 552
Query: 683 KSTMEDEKLKEKISDSDKQTI 745
++T+ + + K+ DK I
Sbjct: 553 ETTISEPNVMMKLKRGDKSKI 573
Score = 78.6 bits (185), Expect = 9e-16
Identities = 34/45 (75%), Positives = 41/45 (91%)
Frame = +3
Query: 3 DAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 137
D+K+ KA +HDIVLVGGSTRIPKVQ+L+ DFF+G+ LNKSINPDE
Sbjct: 325 DSKVPKADVHDIVLVGGSTRIPKVQRLVSDFFDGRALNKSINPDE 369
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 41.9 bits (94), Expect = 1e-04
Identities = 16/44 (36%), Positives = 31/44 (70%)
Frame = +3
Query: 6 AKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 137
A + ++I+ I+L GG++RIP +Q L D+ + +++K++N DE
Sbjct: 358 ANLTFSEINSIILFGGASRIPFIQSTLADYVSSDKISKNVNADE 401
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 37.5 bits (83), Expect = 0.002
Identities = 17/44 (38%), Positives = 31/44 (70%)
Frame = +3
Query: 6 AKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 137
A + K ++ I +VGG TR+P V++++ ++F GK L+ ++N DE
Sbjct: 330 AGIKKEDLYSIEMVGGCTRVPIVKEVIANYF-GKGLSFTLNQDE 372
Score = 26.6 bits (56), Expect = 3.8
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +2
Query: 635 ETIQAKNALESYCFSMKSTMED 700
ET+ KNALE Y + ++ ++D
Sbjct: 575 ETVDRKNALEEYIYDTRAKLDD 596
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 29.5 bits (63), Expect = 0.54
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +3
Query: 6 AKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKS 122
A M+ I +++L GG++ PK+ L++ F + + +S
Sbjct: 348 ANMEPFDISEVILAGGASNTPKLTSLMESIFPEQTIIRS 386
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 28.3 bits (60), Expect = 1.3
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1
Query: 553 KGRLSKEEIERMVNEAEKYRN 615
KG LSKEE+ER V +A K N
Sbjct: 525 KGTLSKEELERRVYDAAKLAN 545
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 27.9 bits (59), Expect = 1.7
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +1
Query: 520 NKENKITITNDKGRLSKEEIERMVNEAEKYRNEDEQ 627
NK+ K T D SKEE+E +V E E N+ EQ
Sbjct: 529 NKKGKHTQIEDPTAASKEELENLVREDE---NDSEQ 561
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 27.5 bits (58), Expect = 2.2
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Frame = -1
Query: 218 KQQQILHLLR-LVTVQDSSLDSCTISYG-LVRVNRFV--ELLSIKEILQELLHLGDTSGA 51
K QQ+L LL LV D+ +DS + L ++ V S+ ELL LGD S
Sbjct: 932 KHQQLLDLLESLVGNNDNLIDSIKTPHTELQKITDHVLKGTTSLANHTNELLGLGDESLC 991
Query: 50 THQYNIVDLSLIHL 9
+ I D SL+ L
Sbjct: 992 NLETTIEDTSLVKL 1005
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 27.5 bits (58), Expect = 2.2
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 593 MRQRSTETRMNKQKETIQAKNALESYCFSMKST 691
M + +R K+TI KNA++ Y S+K T
Sbjct: 247 MLSKLVSSRNKPNKQTILTKNAIQDYLVSLKIT 279
>SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 27.1 bits (57), Expect = 2.9
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = -3
Query: 501 ETLRIPLASMSKVTSI*GTPRGAGGIPVSSNLPSKLLSLVIARSPS 364
E L PLA MS TSI G G GG P + + + + +SPS
Sbjct: 76 EVLVDPLADMSAGTSIMGNNFGFGGFPRMNRRQRRRMG-IFDQSPS 120
>SPAC328.02 |||Ariadne homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 504
Score = 26.6 bits (56), Expect = 3.8
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +1
Query: 505 YQKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDEQAKGDH 642
Y + +E T D S+ +ER ++ ++ N ++ AK DH
Sbjct: 332 YTCNRYEEKSSTSARDSQSKSRASLERYLHYYNRFANHEQSAKLDH 377
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 26.2 bits (55), Expect = 5.1
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +3
Query: 285 TLPSPLNRLRHSPPTLITNPEYSSKYLR 368
T P RLRH+P I E KYLR
Sbjct: 43 TYGQPFKRLRHAPEKYIEFLELRLKYLR 70
>SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 25.8 bits (54), Expect = 6.7
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +1
Query: 508 QKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNED 621
++S K + + K EE+E VNE E++R D
Sbjct: 263 KRSLAKTREAVLAVTKWTTDDEELESFVNEEEEFRASD 300
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 25.4 bits (53), Expect = 8.9
Identities = 12/47 (25%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 511 KSTNKENKITITNDKGRL-SKEEIERMVNEAEKYRNEDEQAKGDHPG 648
++ K N+ + N++ L SKE+ + + + ++ EDE+ D G
Sbjct: 4014 ETEQKSNEQSAANNESDLVSKEDDNKALEDKDRQEKEDEEEMSDDVG 4060
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,944,443
Number of Sequences: 5004
Number of extensions: 55146
Number of successful extensions: 255
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 247
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 363302114
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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