Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10846
         (439 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    37   0.16 
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    37   0.22 
UniRef50_Q01TS6 Cluster: Transposase IS66; n=1; Solibacter usita...    31   8.1  
UniRef50_Q23E28 Cluster: Patched family protein; n=1; Tetrahymen...    31   8.1  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 37.1 bits (82), Expect = 0.16
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = -1

Query: 427 FLLLRWVDELTAHLVL 380
           FLLLRWVDELTAHLVL
Sbjct: 154 FLLLRWVDELTAHLVL 169



 Score = 31.9 bits (69), Expect = 6.2
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = -3

Query: 365 PMDIYNVNAPPTLRYKF 315
           P  +Y+VNAPPT RYKF
Sbjct: 175 PRHLYDVNAPPTSRYKF 191


>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 36.7 bits (81), Expect = 0.22
 Identities = 13/14 (92%), Positives = 14/14 (100%)
 Frame = -3

Query: 230 WYLPARTHKRSYHQ 189
           WYLPARTHKRSYH+
Sbjct: 572 WYLPARTHKRSYHR 585


>UniRef50_Q01TS6 Cluster: Transposase IS66; n=1; Solibacter usitatus
           Ellin6076|Rep: Transposase IS66 - Solibacter usitatus
           (strain Ellin6076)
          Length = 963

 Score = 31.5 bits (68), Expect = 8.1
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -2

Query: 306 QYSYNGCRTLPTETHLLLTAEIGSAVVPTRADSQEVLPPVITQI 175
           +Y+   C  L T T  + +A  GSA  PT +   + LPP++ ++
Sbjct: 441 EYNLEDCAALRTVTEFVKSA-CGSASAPTESGKADALPPMVMRV 483


>UniRef50_Q23E28 Cluster: Patched family protein; n=1; Tetrahymena
           thermophila SB210|Rep: Patched family protein -
           Tetrahymena thermophila SB210
          Length = 1207

 Score = 31.5 bits (68), Expect = 8.1
 Identities = 12/25 (48%), Positives = 19/25 (76%)
 Frame = -1

Query: 154 FITRCYSFTVEVNRKYLLST*FIRK 80
           FI RCYS TV +++KY+L + ++ K
Sbjct: 434 FIIRCYSITVALDKKYILESSYLCK 458


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 484,101,156
Number of Sequences: 1657284
Number of extensions: 9533294
Number of successful extensions: 20811
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20793
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21918499148
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)