Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10844
(790 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P61254 Cluster: 60S ribosomal protein L26; n=96; Eukary... 156 5e-37
UniRef50_UPI0000D8B882 Cluster: similar to 60S ribosomal protein... 133 4e-30
UniRef50_A2QXI7 Cluster: Contig An11c0300, complete genome; n=2;... 109 1e-22
UniRef50_A5KBD9 Cluster: 60S ribosomal protein L26, putative; n=... 106 5e-22
UniRef50_P05743 Cluster: 60S ribosomal protein L26-A; n=92; Euka... 101 2e-20
UniRef50_A0BIZ3 Cluster: Chromosome undetermined scaffold_11, wh... 99 1e-19
UniRef50_Q5ZDH6 Cluster: Putative ribosomal protein L26; n=1; Or... 96 1e-18
UniRef50_Q00Y51 Cluster: Putative L24 ribosomal protein; n=1; Os... 94 3e-18
UniRef50_A7QPA2 Cluster: Chromosome chr1 scaffold_136, whole gen... 84 4e-15
UniRef50_UPI0000499C5A Cluster: 60S ribosomal protein L26; n=2; ... 80 7e-14
UniRef50_UPI0000DD790D Cluster: PREDICTED: similar to 60S riboso... 77 4e-13
UniRef50_Q8TW19 Cluster: 50S ribosomal protein L24P; n=17; Archa... 77 7e-13
UniRef50_P54038 Cluster: 50S ribosomal protein L24P; n=14; Archa... 75 3e-12
UniRef50_Q7R3B5 Cluster: GLP_111_22147_22554; n=1; Giardia lambl... 74 4e-12
UniRef50_P60663 Cluster: 50S ribosomal protein L24P; n=1; Nanoar... 68 2e-10
UniRef50_Q0IUK5 Cluster: Os11g0151300 protein; n=1; Oryza sativa... 67 4e-10
UniRef50_A3H985 Cluster: Ribosomal protein L24; n=1; Caldivirga ... 64 4e-09
UniRef50_Q8SRE6 Cluster: 60S RIBOSOMAL PROTEIN L26; n=1; Encepha... 63 7e-09
UniRef50_A1RWS4 Cluster: Ribosomal protein L24; n=1; Thermofilum... 62 1e-08
UniRef50_O05633 Cluster: 50S ribosomal protein L24P; n=1; Sulfol... 60 6e-08
UniRef50_A2DCS2 Cluster: Ribosomal protein L24, putative; n=2; T... 57 6e-07
UniRef50_Q98RW9 Cluster: 60S ribosomal protein L26; n=1; Guillar... 56 1e-06
UniRef50_Q8PV39 Cluster: 50S ribosomal protein L24P; n=9; Euryar... 56 1e-06
UniRef50_A0RVY4 Cluster: Ribosomal protein L24; n=1; Cenarchaeum... 52 2e-05
UniRef50_P10972 Cluster: 50S ribosomal protein L24P; n=6; Euryar... 49 1e-04
UniRef50_A7DSY3 Cluster: KOW domain protein; n=1; Candidatus Nit... 46 8e-04
UniRef50_A4YCX7 Cluster: KOW domain protein; n=1; Metallosphaera... 46 0.001
UniRef50_Q97BW5 Cluster: 50S ribosomal protein L24P; n=2; Thermo... 44 0.004
UniRef50_Q6L1B6 Cluster: Large subunit ribosomal protein L24P; n... 43 0.008
UniRef50_Q30Z53 Cluster: 50S ribosomal protein L24; n=9; Bacteri... 42 0.013
UniRef50_UPI00005A08CE Cluster: PREDICTED: similar to 60S riboso... 38 0.29
UniRef50_Q2JIL6 Cluster: 50S ribosomal protein L24; n=25; Bacter... 38 0.38
UniRef50_Q64E17 Cluster: Ribosomal protein L21E; n=3; environmen... 37 0.50
UniRef50_Q673R7 Cluster: Ribosomal protein L24; n=2; environment... 37 0.66
UniRef50_Q56435 Cluster: 50S ribosomal protein L24; n=18; Bacter... 37 0.66
UniRef50_Q4S8H7 Cluster: Chromosome 2 SCAF14705, whole genome sh... 36 0.88
UniRef50_UPI00006CE582 Cluster: hypothetical protein TTHERM_0014... 36 1.5
UniRef50_UPI0000DC0080 Cluster: UPI0000DC0080 related cluster; n... 34 3.5
UniRef50_Q9XD25 Cluster: 50S ribosomal protein L24; n=11; Bacter... 33 8.2
>UniRef50_P61254 Cluster: 60S ribosomal protein L26; n=96;
Eukaryota|Rep: 60S ribosomal protein L26 - Homo sapiens
(Human)
Length = 145
Score = 156 bits (379), Expect = 5e-37
Identities = 70/83 (84%), Positives = 80/83 (96%)
Frame = -3
Query: 500 VTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQ 321
VTS R KNRKRHF+APSHIRR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRGHYKGQQ
Sbjct: 7 VTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQ 66
Query: 320 VGKVMQVYRKKFVVYIERIQRER 252
+GKV+QVYRKK+V+YIER+QRE+
Sbjct: 67 IGKVVQVYRKKYVIYIERVQREK 89
Score = 69.7 bits (163), Expect = 8e-11
Identities = 32/51 (62%), Positives = 41/51 (80%)
Frame = -2
Query: 261 KRKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 109
+ KANG T +VGIHPSK VI +LK++KDRK IL+R+AK R +GK+KGKY
Sbjct: 87 REKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSR--QVGKEKGKY 135
>UniRef50_UPI0000D8B882 Cluster: similar to 60S ribosomal protein
L26 (Silica-induced gene 20 protein) (SIG-20)
(LOC668913), mRNA; n=2; Eutheria|Rep: similar to 60S
ribosomal protein L26 (Silica-induced gene 20 protein)
(SIG-20) (LOC668913), mRNA - Mus musculus
Length = 139
Score = 133 bits (322), Expect = 4e-30
Identities = 59/83 (71%), Positives = 74/83 (89%)
Frame = -3
Query: 500 VTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQ 321
VTS R K HF+APSHI R +MSSPLSKELRQK+NV+SMP +KDDEVQVVRGHY+GQQ
Sbjct: 7 VTSDRSMKHKWHFNAPSHILRKIMSSPLSKELRQKYNVQSMPTQKDDEVQVVRGHYEGQQ 66
Query: 320 VGKVMQVYRKKFVVYIERIQRER 252
+GKV+QVYRKK+V+YI++++RE+
Sbjct: 67 IGKVVQVYRKKYVIYIKQVEREK 89
Score = 52.4 bits (120), Expect = 1e-05
Identities = 28/51 (54%), Positives = 36/51 (70%)
Frame = -2
Query: 261 KRKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 109
+ KANG T VGIHPSK VI +LK+ +DRK IL+R+ +GK+KGKY
Sbjct: 87 REKANGTTVRVGIHPSKVVITRLKL-EDRKKILERK-------VGKEKGKY 129
>UniRef50_A2QXI7 Cluster: Contig An11c0300, complete genome; n=2;
Trichocomaceae|Rep: Contig An11c0300, complete genome -
Aspergillus niger
Length = 134
Score = 109 bits (261), Expect = 1e-22
Identities = 51/86 (59%), Positives = 68/86 (79%)
Frame = -3
Query: 509 HKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYK 330
+ + SSRRK+R HF+APS RRV++S+PLS ELR K+NV+SMPIRKDDEV VVRG K
Sbjct: 5 NSSLASSRRKSRAAHFNAPSSERRVILSAPLSSELRAKYNVRSMPIRKDDEVMVVRGSNK 64
Query: 329 GQQVGKVMQVYRKKFVVYIERIQRER 252
G++ GKV VYR K+ +++ERI R++
Sbjct: 65 GRE-GKVTSVYRLKWAIHVERISRDK 89
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/47 (48%), Positives = 32/47 (68%)
Frame = -2
Query: 264 SKRKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGK 124
S+ K+NG + + +HPS VI KL ++KDR+AIL+R KGR A K
Sbjct: 86 SRDKSNGQSVPIPLHPSNVVIKKLHLDKDREAILERVGKGREAVKAK 132
>UniRef50_A5KBD9 Cluster: 60S ribosomal protein L26, putative; n=9;
Eukaryota|Rep: 60S ribosomal protein L26, putative -
Plasmodium vivax
Length = 156
Score = 106 bits (255), Expect = 5e-22
Identities = 46/86 (53%), Positives = 70/86 (81%)
Frame = -3
Query: 509 HKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYK 330
+KQ++S+RRK RK HF+AP+ +RR +MSS LSKELR K+ +++P+RKDDEV + RGH
Sbjct: 33 NKQISSARRKMRKAHFTAPAGLRRKIMSSKLSKELRLKYKTRALPVRKDDEVLICRGHNH 92
Query: 329 GQQVGKVMQVYRKKFVVYIERIQRER 252
G++ GKV+++ RK+F +Y+ER+ RE+
Sbjct: 93 GRE-GKVVKINRKRFKIYVERVTREK 117
Score = 52.0 bits (119), Expect = 2e-05
Identities = 20/38 (52%), Positives = 31/38 (81%)
Frame = -2
Query: 264 SKRKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRA 151
++ KANG + ++GIHPS ++ KLK++K+RK ILDR+A
Sbjct: 114 TREKANGESTFIGIHPSNVILTKLKIDKNRKKILDRKA 151
>UniRef50_P05743 Cluster: 60S ribosomal protein L26-A; n=92;
Eukaryota|Rep: 60S ribosomal protein L26-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 127
Score = 101 bits (243), Expect = 2e-20
Identities = 47/83 (56%), Positives = 66/83 (79%)
Frame = -3
Query: 500 VTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQ 321
V+S RRK RK +F+APS RRVL+S+PLSKELR ++ +K++PIR+DDEV VVRG KGQ+
Sbjct: 8 VSSDRRKARKAYFTAPSSQRRVLLSAPLSKELRAQYGIKALPIRRDDEVLVVRGSKKGQE 67
Query: 320 VGKVMQVYRKKFVVYIERIQRER 252
GK+ VYR KF V ++++ +E+
Sbjct: 68 -GKISSVYRLKFAVQVDKVTKEK 89
Score = 48.0 bits (109), Expect = 3e-04
Identities = 21/42 (50%), Positives = 31/42 (73%)
Frame = -2
Query: 264 SKRKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRL 139
+K K NGA+ + +HPSK VI KL ++KDRKA++ R+ G+L
Sbjct: 86 TKEKVNGASVPINLHPSKLVITKLHLDKDRKALIQRKG-GKL 126
>UniRef50_A0BIZ3 Cluster: Chromosome undetermined scaffold_11, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_11,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 144
Score = 98.7 bits (235), Expect = 1e-19
Identities = 45/88 (51%), Positives = 67/88 (76%)
Frame = -3
Query: 515 EVHKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGH 336
+ H +V+S RRK R+ APS++R LMS+ LSK+LR+K+NV+++P+RKDDEV VVRG
Sbjct: 2 KTHVEVSSQRRKGRRAQLGAPSNLRYKLMSAHLSKDLRKKYNVRALPVRKDDEVTVVRGT 61
Query: 335 YKGQQVGKVMQVYRKKFVVYIERIQRER 252
+KG + GKV VYRK++ + IE++ R +
Sbjct: 62 HKGTK-GKVSSVYRKRWTIQIEKLTRTK 88
Score = 42.3 bits (95), Expect = 0.013
Identities = 18/47 (38%), Positives = 30/47 (63%)
Frame = -2
Query: 264 SKRKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGK 124
++ KANG + I S+C+I K +N+DRK +L R+A +++ GK
Sbjct: 85 TRTKANGMPYQIPIRASQCIITKPYLNEDRKQLLARKASAKVSTKGK 131
>UniRef50_Q5ZDH6 Cluster: Putative ribosomal protein L26; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Putative ribosomal
protein L26 - Oryza sativa subsp. japonica (Rice)
Length = 129
Score = 95.9 bits (228), Expect = 1e-18
Identities = 45/59 (76%), Positives = 52/59 (88%)
Frame = -3
Query: 503 QVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKG 327
+VTSSRRK RK HF+APS +RRVLMS+ LS ELR K+NV+S+PIRKDDEVQVVRG YKG
Sbjct: 6 RVTSSRRKCRKAHFTAPSSVRRVLMSAALSSELRHKYNVRSIPIRKDDEVQVVRGSYKG 64
>UniRef50_Q00Y51 Cluster: Putative L24 ribosomal protein; n=1;
Ostreococcus tauri|Rep: Putative L24 ribosomal protein -
Ostreococcus tauri
Length = 154
Score = 94.3 bits (224), Expect = 3e-18
Identities = 46/83 (55%), Positives = 63/83 (75%)
Frame = -3
Query: 500 VTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQ 321
VTSSRRK RK HF+APS RR LMS+ LS EL+ + ++PIR +DEV+V RG +K ++
Sbjct: 26 VTSSRRKTRKAHFTAPSSERRKLMSAALSAELKAQHGANAVPIRVNDEVRVTRGSFKNRE 85
Query: 320 VGKVMQVYRKKFVVYIERIQRER 252
GKV+QVYRKK+V++I I R++
Sbjct: 86 -GKVVQVYRKKWVIHIANITRDK 107
>UniRef50_A7QPA2 Cluster: Chromosome chr1 scaffold_136, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr1 scaffold_136, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 119
Score = 83.8 bits (198), Expect = 4e-15
Identities = 39/62 (62%), Positives = 53/62 (85%)
Frame = -3
Query: 437 VLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQR 258
+LMS+PLS LR K+NV+SMPIRKDDEVQVVRG +KG++ GKV+QVY +K V++++RI
Sbjct: 46 LLMSAPLSTNLRSKYNVRSMPIRKDDEVQVVRGTFKGRE-GKVVQVYCQKRVIHVKRISH 104
Query: 257 ER 252
E+
Sbjct: 105 EK 106
>UniRef50_UPI0000499C5A Cluster: 60S ribosomal protein L26; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L26 - Entamoeba histolytica HM-1:IMSS
Length = 213
Score = 79.8 bits (188), Expect = 7e-14
Identities = 38/84 (45%), Positives = 61/84 (72%)
Frame = -3
Query: 503 QVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQ 324
+V+S+ K RK ++AP+ R +LMS+ LSKELR+K+NV ++PI KDDEV++++GH K
Sbjct: 6 KVSSNPSKARKALYTAPASQRAILMSARLSKELREKYNVIAIPIHKDDEVKIIKGHQK-- 63
Query: 323 QVGKVMQVYRKKFVVYIERIQRER 252
GKV V R K+V+ I+++ + +
Sbjct: 64 VAGKVTAVRRSKYVINIDKLTKTK 87
Score = 45.2 bits (102), Expect = 0.002
Identities = 21/41 (51%), Positives = 28/41 (68%)
Frame = -2
Query: 264 SKRKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGR 142
+K KANG T V I PS +I KL +NKDR+A L ++A+ R
Sbjct: 84 TKTKANGQTVPVAIRPSNVIITKLFLNKDREAYLAKKAESR 124
>UniRef50_UPI0000DD790D Cluster: PREDICTED: similar to 60S ribosomal
protein L26 (Silica-induced gene 20 protein) (SIG-20);
n=2; Homo/Pan/Gorilla group|Rep: PREDICTED: similar to
60S ribosomal protein L26 (Silica-induced gene 20
protein) (SIG-20) - Homo sapiens
Length = 127
Score = 77.4 bits (182), Expect = 4e-13
Identities = 36/54 (66%), Positives = 45/54 (83%), Gaps = 2/54 (3%)
Frame = -3
Query: 407 LRQKFNVKSMPIRKDDEVQVVR--GHYKGQQVGKVMQVYRKKFVVYIERIQRER 252
L NV+SMP RKD+EVQVVR GHYKGQQ+G V+QVYRKK+V+YIE +Q+E+
Sbjct: 18 LNAHINVQSMPNRKDNEVQVVRVRGHYKGQQIGTVVQVYRKKYVIYIEWVQQEK 71
Score = 64.1 bits (149), Expect = 4e-09
Identities = 30/51 (58%), Positives = 39/51 (76%)
Frame = -2
Query: 261 KRKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 109
+ KANG T +VGIHPSK VI +LK++KDRK I +++AK A GK+KGKY
Sbjct: 69 QEKANGTTVHVGIHPSKAVITRLKLDKDRKKIPEQKAKSHQA--GKEKGKY 117
>UniRef50_Q8TW19 Cluster: 50S ribosomal protein L24P; n=17;
Archaea|Rep: 50S ribosomal protein L24P - Methanopyrus
kandleri
Length = 149
Score = 76.6 bits (180), Expect = 7e-13
Identities = 37/82 (45%), Positives = 57/82 (69%)
Frame = -3
Query: 497 TSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQV 318
+S RK RK F+AP H R+ LMS+ L ELR+KFN +S+P+R+ D V+++RG +KG +
Sbjct: 6 SSQPRKQRKAFFNAPLHKRQKLMSATLHPELRKKFNRRSLPVRRGDMVRIMRGDFKGHE- 64
Query: 317 GKVMQVYRKKFVVYIERIQRER 252
G+V++V K+ +Y+E ER
Sbjct: 65 GEVVEVDLKRLRIYVEGATIER 86
>UniRef50_P54038 Cluster: 50S ribosomal protein L24P; n=14;
Archaea|Rep: 50S ribosomal protein L24P - Methanococcus
jannaschii
Length = 120
Score = 74.5 bits (175), Expect = 3e-12
Identities = 34/78 (43%), Positives = 56/78 (71%)
Frame = -3
Query: 485 RKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVM 306
RK RK F+AP H+RR +MS+ LSKEL++K ++P+RK D V+++RG +KG + G+V+
Sbjct: 10 RKQRKALFNAPLHLRRKVMSAMLSKELKEKLGKNAIPVRKGDVVRIMRGDFKGLE-GEVI 68
Query: 305 QVYRKKFVVYIERIQRER 252
+V K++ +Y+E +R
Sbjct: 69 KVDLKRYRIYVEGANNKR 86
>UniRef50_Q7R3B5 Cluster: GLP_111_22147_22554; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_111_22147_22554 - Giardia lamblia
ATCC 50803
Length = 135
Score = 74.1 bits (174), Expect = 4e-12
Identities = 37/87 (42%), Positives = 60/87 (68%)
Frame = -3
Query: 515 EVHKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGH 336
+++ VT+SRRK RK +F+A + R +MSS LSKELR + +K+MPIR+ D V++ G
Sbjct: 2 KLNSAVTASRRKCRKAYFTANAETRAKMMSSRLSKELRAEHKIKTMPIRRGDIVEIFTGG 61
Query: 335 YKGQQVGKVMQVYRKKFVVYIERIQRE 255
+KG GKV++V R+ + + +E I ++
Sbjct: 62 HKG--TGKVVEVRRRDYKICVEGINQK 86
>UniRef50_P60663 Cluster: 50S ribosomal protein L24P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L24P -
Nanoarchaeum equitans
Length = 140
Score = 68.1 bits (159), Expect = 2e-10
Identities = 39/97 (40%), Positives = 61/97 (62%), Gaps = 1/97 (1%)
Frame = -3
Query: 485 RKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVM 306
RK RK +AP H RR +M SPLSKELR+K ++++PI+ D V+V RG+++G++ G+V+
Sbjct: 23 RKQRKYIINAPLHRRRKMMRSPLSKELREKLGIRNVPIKVGDVVRVERGNFRGKE-GQVI 81
Query: 305 QVYRKKFVVYIE-RIQRERPMVQQHMSAFTLQSV*LS 198
+ K + VY+ R+ P H S T+ + LS
Sbjct: 82 DIDPKYYRVYLSLDTDRQYPF---HPSKLTIIKLDLS 115
>UniRef50_Q0IUK5 Cluster: Os11g0151300 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os11g0151300 protein -
Oryza sativa subsp. japonica (Rice)
Length = 163
Score = 67.3 bits (157), Expect = 4e-10
Identities = 33/66 (50%), Positives = 51/66 (77%)
Frame = -3
Query: 449 HIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIE 270
H+RR L +P ++++ + P+RKDDEVQVVRG YKG++ GKV+QVYR+++V+++E
Sbjct: 40 HVRRALHRAP--PQVQRPLH----PVRKDDEVQVVRGSYKGRE-GKVVQVYRRRWVIHVE 92
Query: 269 RIQRER 252
RI RE+
Sbjct: 93 RITREK 98
Score = 67.3 bits (157), Expect = 4e-10
Identities = 32/52 (61%), Positives = 40/52 (76%)
Frame = -2
Query: 264 SKRKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 109
++ K NG+T VGIHPSK V+ KLK++KDRKAILDR+A GR A K KGK+
Sbjct: 95 TREKVNGSTVNVGIHPSKVVVTKLKLDKDRKAILDRKASGR--AADKAKGKF 144
>UniRef50_A3H985 Cluster: Ribosomal protein L24; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L24 -
Caldivirga maquilingensis IC-167
Length = 143
Score = 64.1 bits (149), Expect = 4e-09
Identities = 30/83 (36%), Positives = 53/83 (63%)
Frame = -3
Query: 497 TSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQV 318
+S RK K AP H RR L+++PLSK+L+++ ++ +P+R D V ++RG +KG +
Sbjct: 7 SSQPRKQHKALTKAPWHARRRLLTAPLSKDLQRQLGIRRIPVRVGDTVLILRGDFKGTR- 65
Query: 317 GKVMQVYRKKFVVYIERIQRERP 249
GKV +V K+ +Y++ ++P
Sbjct: 66 GKVTRVDYKRVRIYVDSASFKKP 88
Score = 37.5 bits (83), Expect = 0.38
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = -2
Query: 264 SKRKANGATAYVGIHPSKCVIVKL-KMNKDRKAILDRRAKGRLAALG 127
S +K +G Y IHPSK VIV+L + +K R A +D+ K R A G
Sbjct: 84 SFKKPSGEAVYYPIHPSKVVIVELDQSDKARVAAIDKTRKAREAKAG 130
>UniRef50_Q8SRE6 Cluster: 60S RIBOSOMAL PROTEIN L26; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L26
- Encephalitozoon cuniculi
Length = 143
Score = 63.3 bits (147), Expect = 7e-09
Identities = 31/81 (38%), Positives = 51/81 (62%)
Frame = -3
Query: 512 VHKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHY 333
+ KQ TSSRRK RK HF+ +R+ S+ LS+ELR+++ ++ P+R D V V G +
Sbjct: 4 LRKQKTSSRRKQRKAHFACNDGEKRIRSSARLSRELRKEYGFRTFPLRTGDTVVVKGGKF 63
Query: 332 KGQQVGKVMQVYRKKFVVYIE 270
G++ G + ++ + + VYIE
Sbjct: 64 DGKE-GVISKINYRDYKVYIE 83
>UniRef50_A1RWS4 Cluster: Ribosomal protein L24; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L24 - Thermofilum
pendens (strain Hrk 5)
Length = 131
Score = 62.5 bits (145), Expect = 1e-08
Identities = 35/80 (43%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Frame = -3
Query: 506 KQVTSSRRKNRKRH-FSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYK 330
K +S K RKR + AP HIR + +PLS EL+QK +K + +RK D V +VRG +K
Sbjct: 3 KGTSSKPGKVRKREVYDAPLHIRSKKIVAPLSAELQQKLGIKRIRVRKGDRVLIVRGSFK 62
Query: 329 GQQVGKVMQVYRKKFVVYIE 270
G + GKV V KK +++E
Sbjct: 63 GHE-GKVTSVDVKKGRIHVE 81
>UniRef50_O05633 Cluster: 50S ribosomal protein L24P; n=1;
Sulfolobus acidocaldarius|Rep: 50S ribosomal protein
L24P - Sulfolobus acidocaldarius
Length = 134
Score = 60.1 bits (139), Expect = 6e-08
Identities = 29/83 (34%), Positives = 56/83 (67%)
Frame = -3
Query: 500 VTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQ 321
++S K RK ++ P+H+R L+++ LS++L +++ +K + IRK D V+++RG G +
Sbjct: 2 ISSKPSKQRKLVYNLPNHLRYKLLTARLSEDLEKQYGIKRISIRKGDSVKLMRGSQVGYE 61
Query: 320 VGKVMQVYRKKFVVYIERIQRER 252
GKV++V RK+ V IE + +++
Sbjct: 62 -GKVVEVDRKRGRVAIEGLTKKK 83
>UniRef50_A2DCS2 Cluster: Ribosomal protein L24, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L24,
putative - Trichomonas vaginalis G3
Length = 138
Score = 56.8 bits (131), Expect = 6e-07
Identities = 26/52 (50%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
Frame = -2
Query: 264 SKRKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGR---LAALGKDK 118
++ K NG T +V +HPS C+I KLKM+K RK +++RR GR LA LG +K
Sbjct: 86 TREKLNGQTVHVSVHPSNCLITKLKMDKQRKELIERRRAGREKILAKLGHNK 137
Score = 53.2 bits (122), Expect = 7e-06
Identities = 27/83 (32%), Positives = 48/83 (57%)
Frame = -3
Query: 500 VTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQ 321
++S +K RK F+A + +S+ L+KE + VK +PIR+DDEV + G + G++
Sbjct: 8 LSSQAKKTRKAFFNATKDDKHRQLSAKLNKEQAETHGVKQLPIRRDDEVSINSGKFAGRE 67
Query: 320 VGKVMQVYRKKFVVYIERIQRER 252
GKV+ V + + ++ RE+
Sbjct: 68 -GKVIAVKLSENRIVVDSFTREK 89
>UniRef50_Q98RW9 Cluster: 60S ribosomal protein L26; n=1; Guillardia
theta|Rep: 60S ribosomal protein L26 - Guillardia theta
(Cryptomonas phi)
Length = 108
Score = 56.0 bits (129), Expect = 1e-06
Identities = 29/83 (34%), Positives = 53/83 (63%)
Frame = -3
Query: 500 VTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQ 321
VT SRRKNRKR F ++ + LSKE+++ K++ ++K+ E++V RG +KG +
Sbjct: 7 VTCSRRKNRKRCFLNLKRKNSNIIKTNLSKEMQKYHKKKTLILKKNYEIKVKRGDFKG-K 65
Query: 320 VGKVMQVYRKKFVVYIERIQRER 252
GKV+Q+ ++ ++++ I R +
Sbjct: 66 TGKVIQIKPEQQKIFVDNIFRNK 88
>UniRef50_Q8PV39 Cluster: 50S ribosomal protein L24P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L24P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 122
Score = 55.6 bits (128), Expect = 1e-06
Identities = 27/73 (36%), Positives = 45/73 (61%)
Frame = -3
Query: 518 NEVHKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 339
+EV + V+ RK RK ++AP HIR+ M + LS+ L +++ +S + D V+++RG
Sbjct: 2 SEVIEMVSKQPRKQRKARYTAPLHIRQKFMGARLSEALAKQYGTRSAAVITGDTVKIMRG 61
Query: 338 HYKGQQVGKVMQV 300
+KG + GKV V
Sbjct: 62 DFKGTE-GKVQSV 73
>UniRef50_A0RVY4 Cluster: Ribosomal protein L24; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L24 - Cenarchaeum
symbiosum
Length = 167
Score = 52.0 bits (119), Expect = 2e-05
Identities = 31/81 (38%), Positives = 49/81 (60%)
Frame = -3
Query: 494 SSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVG 315
+++ +NR+ + A + R + + SPLSKELR K+ +S+ + + D V VVRG YK G
Sbjct: 3 ATKMRNRQI-YQASTRTRSMQVGSPLSKELRAKYGKRSVRVVEGDTVSVVRGEYKDID-G 60
Query: 314 KVMQVYRKKFVVYIERIQRER 252
KV V + V IE I++E+
Sbjct: 61 KVSHVDTESGSVAIEGIKKEK 81
>UniRef50_P10972 Cluster: 50S ribosomal protein L24P; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L24P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 120
Score = 49.2 bits (112), Expect = 1e-04
Identities = 24/77 (31%), Positives = 46/77 (59%)
Frame = -3
Query: 482 KNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQ 303
K RK AP H R + + LS +LR+++ +++ + D V+V+RG + G++ G+V+
Sbjct: 7 KQRKSQRRAPLHERHKQVRATLSADLREEYGQRNVRVNAGDTVEVLRGDFAGEE-GEVIN 65
Query: 302 VYRKKFVVYIERIQRER 252
V K V+++E + E+
Sbjct: 66 VDLDKAVIHVEDVTLEK 82
>UniRef50_A7DSY3 Cluster: KOW domain protein; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: KOW domain protein -
Candidatus Nitrosopumilus maritimus SCM1
Length = 168
Score = 46.4 bits (105), Expect = 8e-04
Identities = 24/78 (30%), Positives = 44/78 (56%)
Frame = -3
Query: 485 RKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVM 306
+ K + A + + S LSK+L++K+ +S+ + + D V ++RG +KG GKV
Sbjct: 5 KMRNKMIYRASYQTKSKQLGSALSKDLQKKYGKRSVRVNEGDSVTILRGEFKGVD-GKVA 63
Query: 305 QVYRKKFVVYIERIQRER 252
+V K V IE +++E+
Sbjct: 64 EVSTAKSSVAIEGVKKEK 81
>UniRef50_A4YCX7 Cluster: KOW domain protein; n=1; Metallosphaera
sedula DSM 5348|Rep: KOW domain protein - Metallosphaera
sedula DSM 5348
Length = 111
Score = 45.6 bits (103), Expect = 0.001
Identities = 24/58 (41%), Positives = 39/58 (67%)
Frame = -3
Query: 425 SPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQRER 252
+PLS EL +++ +K + IRKDD V+V+RG G + GKV QV+ + + IE + R++
Sbjct: 8 APLSDELAKEYGMKRIGIRKDDTVRVMRGDNYGFE-GKVTQVFPESGRIAIEGLTRKK 64
>UniRef50_Q97BW5 Cluster: 50S ribosomal protein L24P; n=2;
Thermoplasma|Rep: 50S ribosomal protein L24P -
Thermoplasma volcanium
Length = 145
Score = 44.0 bits (99), Expect = 0.004
Identities = 24/52 (46%), Positives = 34/52 (65%)
Frame = -3
Query: 419 LSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERI 264
LSK+LR+K+ ++S PI K D V+VV G KG+ GKV +V +V +E I
Sbjct: 9 LSKDLRKKYGIRSFPIVKGDVVKVVSGARKGEG-GKVAEVDHHSGLVIVEGI 59
>UniRef50_Q6L1B6 Cluster: Large subunit ribosomal protein L24P; n=2;
Thermoplasmatales|Rep: Large subunit ribosomal protein
L24P - Picrophilus torridus
Length = 154
Score = 43.2 bits (97), Expect = 0.008
Identities = 21/52 (40%), Positives = 33/52 (63%)
Frame = -3
Query: 419 LSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERI 264
LSK+LR+K+ ++ P+ K D V+++ G KG+ GKV+ V K V IE +
Sbjct: 10 LSKDLRKKYGIRRFPVAKGDIVKIISGSRKGEG-GKVVDVDHKTMKVSIEGV 60
>UniRef50_Q30Z53 Cluster: 50S ribosomal protein L24; n=9;
Bacteria|Rep: 50S ribosomal protein L24 - Desulfovibrio
desulfuricans (strain G20)
Length = 107
Score = 42.3 bits (95), Expect = 0.013
Identities = 23/55 (41%), Positives = 36/55 (65%)
Frame = -3
Query: 389 VKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQRERPMVQQHMSA 225
+K IRKDD+V V+ G KG ++GKV++V RKK V +E++ + ++HM A
Sbjct: 1 MKQFRIRKDDKVMVISGKDKG-KIGKVLKVLRKKDRVLVEKVN----VAKRHMRA 50
>UniRef50_UPI00005A08CE Cluster: PREDICTED: similar to 60S ribosomal
protein L26-like 1; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 60S ribosomal protein L26-like 1 -
Canis familiaris
Length = 165
Score = 37.9 bits (84), Expect = 0.29
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = -3
Query: 479 NRKRHFSAPSHIRRVLMSSP 420
NRKRH +APSH+RR +MSSP
Sbjct: 110 NRKRHVNAPSHVRRNIMSSP 129
>UniRef50_Q2JIL6 Cluster: 50S ribosomal protein L24; n=25;
Bacteria|Rep: 50S ribosomal protein L24 - Synechococcus
sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria
bacteriumYellowstone B-Prime)
Length = 132
Score = 37.5 bits (83), Expect = 0.38
Identities = 23/64 (35%), Positives = 40/64 (62%)
Frame = -3
Query: 455 PSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVY 276
PS IRR L+ P ++ R K M I++ D VQV+ G KG ++G+V++V+ ++ +V
Sbjct: 7 PSQIRR-LVRRPGIRKHRNSLRYK-MRIKQGDTVQVISGDDKG-KIGEVLRVFPERNMVL 63
Query: 275 IERI 264
+E +
Sbjct: 64 VEGV 67
>UniRef50_Q64E17 Cluster: Ribosomal protein L21E; n=3; environmental
samples|Rep: Ribosomal protein L21E - uncultured
archaeon GZfos17A3
Length = 130
Score = 37.1 bits (82), Expect = 0.50
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Frame = -3
Query: 533 SEERQNEVHKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEV 354
SE RQN+ + R++ RK+ S P R + SP+SK ++Q +S+ IR D V
Sbjct: 13 SEWRQNKQMARSHGERKRTRKK-LSKPKRARGL---SPISKAIQQFEPGESVHIRIDPSV 68
Query: 353 QVVRGHYKGQ-QVGKVMQVYRKKFVVYIERIQRERPMVQQ 237
H + GKV+ + F+V I +R+R V++
Sbjct: 69 HKGMPHQRFHGMTGKVIGERGRAFIVEISDGKRKRKKVKE 108
>UniRef50_Q673R7 Cluster: Ribosomal protein L24; n=2; environmental
samples|Rep: Ribosomal protein L24 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 145
Score = 36.7 bits (81), Expect = 0.66
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = -3
Query: 500 VTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHY 333
V+ K R+ AP H+RR M S L + +++S+ IR D V+V+RG +
Sbjct: 2 VSKKAGKQRQAQTDAPVHVRRKRMRSRLISDEPDLQSIRSVTIRVGDTVEVLRGDF 57
>UniRef50_Q56435 Cluster: 50S ribosomal protein L24; n=18;
Bacteria|Rep: 50S ribosomal protein L24 - Thermus
thermophilus
Length = 110
Score = 36.7 bits (81), Expect = 0.66
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = -3
Query: 380 MPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERI 264
M ++K D V V G YKG+ VGKV +V KK+ V +E +
Sbjct: 5 MHVKKGDTVLVASGKYKGR-VGKVKEVLPKKYAVIVEGV 42
>UniRef50_Q4S8H7 Cluster: Chromosome 2 SCAF14705, whole genome shotgun
sequence; n=1; Tetraodon nigroviridis|Rep: Chromosome 2
SCAF14705, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 2759
Score = 36.3 bits (80), Expect = 0.88
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = +3
Query: 66 YLFKRPPWLWQFPRCIYPCLCQVQPVCPLLCDRGLLCG 179
YL P W W FP P L ++Q +CP DR L CG
Sbjct: 2559 YLMNNPSWSWVFP----PDLLRLQRMCPEKMDRFLCCG 2592
>UniRef50_UPI00006CE582 Cluster: hypothetical protein
TTHERM_00145160; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00145160 - Tetrahymena
thermophila SB210
Length = 157
Score = 35.5 bits (78), Expect = 1.5
Identities = 20/83 (24%), Positives = 39/83 (46%)
Frame = -3
Query: 623 KNISRQFDILHARNSNLNKVL*INVVFLRCSEERQNEVHKQVTSSRRKNRKRHFSAPSHI 444
+ +S+QF +LH + SNL+K+ N+ + ++ E++ + ++ K S
Sbjct: 60 QELSQQFKLLHNKQSNLSKIDNSNIELSKLNDADSQEIYNETLFLNIQSNKNSQSQRRE- 118
Query: 443 RRVLMSSPLSKELRQKFNVKSMP 375
+ SSP+ + KFN P
Sbjct: 119 EEYISSSPMIENKIMKFNFSYTP 141
>UniRef50_UPI0000DC0080 Cluster: UPI0000DC0080 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC0080 UniRef100 entry -
Rattus norvegicus
Length = 294
Score = 34.3 bits (75), Expect = 3.5
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Frame = +3
Query: 108 CIYPCLCQVQPVCPLLCDRGLLCGLYSSST*QSHTLKGECRHMLLHHWPFSLNP----LN 275
C+ C+C C +C +C + T +HT +G HM +H F L L+
Sbjct: 43 CVRACVCMYVRTCMYVCVCVCVCTDRHTHT-HTHTKRGRRMHMCIHEHSFQLLLSFCWLH 101
Query: 276 VYNKLFTIHLHHFANLLAFV 335
+ F +HL ++ LL FV
Sbjct: 102 RDERCF-VHLQNYIYLLCFV 120
>UniRef50_Q9XD25 Cluster: 50S ribosomal protein L24; n=11;
Bacteria|Rep: 50S ribosomal protein L24 - Leptospira
interrogans
Length = 119
Score = 33.1 bits (72), Expect = 8.2
Identities = 15/45 (33%), Positives = 29/45 (64%)
Frame = -3
Query: 386 KSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQRER 252
K I+K+DEV + G +KG++ GKV+ + +K+ V +E + + +
Sbjct: 15 KKFRIKKNDEVICITGKHKGKR-GKVLSIDKKRDRVIVEGLNKRK 58
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 738,113,402
Number of Sequences: 1657284
Number of extensions: 15598416
Number of successful extensions: 38335
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 36693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38306
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 67085240885
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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