Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10844
         (790 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    23   2.1  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    23   2.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   3.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   3.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   3.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   3.7  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    22   4.9  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   6.4  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   6.4  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   8.5  

>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 207 HTLKGECRHMLLHHWPFSLNP 269
           HT + +C H LL H P   +P
Sbjct: 352 HTPEPDCIHELLGHMPLLADP 372


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 506 CELHSVALRCNAKT 547
           CELH++ L CN  T
Sbjct: 117 CELHTIFLVCNVLT 130


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = -3

Query: 155 EQRADWLHLAKTRVNTPRKLPQPW 84
           ++ A  +H    R+  P+K+P P+
Sbjct: 645 DEAASDVHQTHMRIRPPKKIPTPY 668


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = -3

Query: 155 EQRADWLHLAKTRVNTPRKLPQPW 84
           ++ A  +H    R+  P+K+P P+
Sbjct: 645 DEAASDVHQTHMRIRPPKKIPTPY 668


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = -3

Query: 155 EQRADWLHLAKTRVNTPRKLPQPW 84
           ++ A  +H    R+  P+K+P P+
Sbjct: 645 DEAASDVHQTHMRIRPPKKIPTPY 668


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = -3

Query: 155 EQRADWLHLAKTRVNTPRKLPQPW 84
           ++ A  +H    R+  P+K+P P+
Sbjct: 645 DEAASDVHQTHMRIRPPKKIPTPY 668


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 527 LRCNAKTPRLFTVLC 571
           L C+   P LF+VLC
Sbjct: 65  LNCHRMKPALFSVLC 79


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 502 CL*TSFCRSSLQRKNTTFIHST 567
           C  T   R+ +   NT+ IHST
Sbjct: 181 CSYTVLIRNKISNLNTSLIHST 202


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 12/52 (23%), Positives = 24/52 (46%)
 Frame = -3

Query: 449 HIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYR 294
           HI R +  S   +   ++   KS+P+RK  E++  +  +K      ++   R
Sbjct: 576 HIMRSITESGGRRRQTREKRKKSLPVRKLLELERAQHEFKNGDSSSLLDKMR 627


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 6/28 (21%), Positives = 17/28 (60%)
 Frame = -3

Query: 332 KGQQVGKVMQVYRKKFVVYIERIQRERP 249
           +G +V K+ ++Y +    Y++  ++ +P
Sbjct: 473 EGWKVEKIQEIYLEALRAYVDNRRKPKP 500


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,752
Number of Sequences: 336
Number of extensions: 4434
Number of successful extensions: 18
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21376414
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)