Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10844
         (790 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X69392-1|CAA49189.1|  145|Homo sapiens ribosomal protein L26 pro...   156   7e-38
L07287-1|AAA60279.1|  145|Homo sapiens ribosomal protein L26 pro...   156   7e-38
CR456828-1|CAG33109.1|  145|Homo sapiens RPL26 protein.               156   7e-38
BC071664-1|AAH71664.1|  145|Homo sapiens RPL26 protein protein.       156   7e-38
AB061829-1|BAB79467.1|  145|Homo sapiens ribosomal protein L26 p...   156   7e-38
BC070192-1|AAH70192.1|  145|Homo sapiens ribosomal protein L26-l...   156   1e-37
BC017360-1|AAH17360.1|  145|Homo sapiens ribosomal protein L26-l...   156   1e-37

>X69392-1|CAA49189.1|  145|Homo sapiens ribosomal protein L26
           protein.
          Length = 145

 Score =  156 bits (379), Expect = 7e-38
 Identities = 70/83 (84%), Positives = 80/83 (96%)
 Frame = -3

Query: 500 VTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQ 321
           VTS R KNRKRHF+APSHIRR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRGHYKGQQ
Sbjct: 7   VTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQ 66

Query: 320 VGKVMQVYRKKFVVYIERIQRER 252
           +GKV+QVYRKK+V+YIER+QRE+
Sbjct: 67  IGKVVQVYRKKYVIYIERVQREK 89



 Score = 69.7 bits (163), Expect = 1e-11
 Identities = 32/51 (62%), Positives = 41/51 (80%)
 Frame = -2

Query: 261 KRKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 109
           + KANG T +VGIHPSK VI +LK++KDRK IL+R+AK R   +GK+KGKY
Sbjct: 87  REKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSR--QVGKEKGKY 135


>L07287-1|AAA60279.1|  145|Homo sapiens ribosomal protein L26
           protein.
          Length = 145

 Score =  156 bits (379), Expect = 7e-38
 Identities = 70/83 (84%), Positives = 80/83 (96%)
 Frame = -3

Query: 500 VTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQ 321
           VTS R KNRKRHF+APSHIRR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRGHYKGQQ
Sbjct: 7   VTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQ 66

Query: 320 VGKVMQVYRKKFVVYIERIQRER 252
           +GKV+QVYRKK+V+YIER+QRE+
Sbjct: 67  IGKVVQVYRKKYVIYIERVQREK 89



 Score = 67.3 bits (157), Expect = 6e-11
 Identities = 31/51 (60%), Positives = 40/51 (78%)
 Frame = -2

Query: 261 KRKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 109
           + KANG T +VGIHPSK VI +LK++KDRK IL+R+AK R   +GK+K KY
Sbjct: 87  REKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSR--QVGKEKSKY 135


>CR456828-1|CAG33109.1|  145|Homo sapiens RPL26 protein.
          Length = 145

 Score =  156 bits (379), Expect = 7e-38
 Identities = 70/83 (84%), Positives = 80/83 (96%)
 Frame = -3

Query: 500 VTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQ 321
           VTS R KNRKRHF+APSHIRR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRGHYKGQQ
Sbjct: 7   VTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQ 66

Query: 320 VGKVMQVYRKKFVVYIERIQRER 252
           +GKV+QVYRKK+V+YIER+QRE+
Sbjct: 67  IGKVVQVYRKKYVIYIERVQREK 89



 Score = 69.7 bits (163), Expect = 1e-11
 Identities = 32/51 (62%), Positives = 41/51 (80%)
 Frame = -2

Query: 261 KRKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 109
           + KANG T +VGIHPSK VI +LK++KDRK IL+R+AK R   +GK+KGKY
Sbjct: 87  REKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSR--QVGKEKGKY 135


>BC071664-1|AAH71664.1|  145|Homo sapiens RPL26 protein protein.
          Length = 145

 Score =  156 bits (379), Expect = 7e-38
 Identities = 70/83 (84%), Positives = 80/83 (96%)
 Frame = -3

Query: 500 VTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQ 321
           VTS R KNRKRHF+APSHIRR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRGHYKGQQ
Sbjct: 7   VTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQ 66

Query: 320 VGKVMQVYRKKFVVYIERIQRER 252
           +GKV+QVYRKK+V+YIER+QRE+
Sbjct: 67  IGKVVQVYRKKYVIYIERVQREK 89



 Score = 69.7 bits (163), Expect = 1e-11
 Identities = 32/51 (62%), Positives = 41/51 (80%)
 Frame = -2

Query: 261 KRKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 109
           + KANG T +VGIHPSK VI +LK++KDRK IL+R+AK R   +GK+KGKY
Sbjct: 87  REKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSR--QVGKEKGKY 135


>AB061829-1|BAB79467.1|  145|Homo sapiens ribosomal protein L26
           protein.
          Length = 145

 Score =  156 bits (379), Expect = 7e-38
 Identities = 70/83 (84%), Positives = 80/83 (96%)
 Frame = -3

Query: 500 VTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQ 321
           VTS R KNRKRHF+APSHIRR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRGHYKGQQ
Sbjct: 7   VTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQ 66

Query: 320 VGKVMQVYRKKFVVYIERIQRER 252
           +GKV+QVYRKK+V+YIER+QRE+
Sbjct: 67  IGKVVQVYRKKYVIYIERVQREK 89



 Score = 69.7 bits (163), Expect = 1e-11
 Identities = 32/51 (62%), Positives = 41/51 (80%)
 Frame = -2

Query: 261 KRKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 109
           + KANG T +VGIHPSK VI +LK++KDRK IL+R+AK R   +GK+KGKY
Sbjct: 87  REKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSR--QVGKEKGKY 135


>BC070192-1|AAH70192.1|  145|Homo sapiens ribosomal protein L26-like
           1 protein.
          Length = 145

 Score =  156 bits (378), Expect = 1e-37
 Identities = 69/83 (83%), Positives = 80/83 (96%)
 Frame = -3

Query: 500 VTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQ 321
           VTS R KNRKRHF+APSH+RR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRGHYKGQQ
Sbjct: 7   VTSDRSKNRKRHFNAPSHVRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQ 66

Query: 320 VGKVMQVYRKKFVVYIERIQRER 252
           +GKV+QVYRKK+V+YIER+QRE+
Sbjct: 67  IGKVVQVYRKKYVIYIERVQREK 89



 Score = 69.7 bits (163), Expect = 1e-11
 Identities = 32/51 (62%), Positives = 41/51 (80%)
 Frame = -2

Query: 261 KRKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 109
           + KANG T +VGIHPSK VI +LK++KDRK IL+R+AK R   +GK+KGKY
Sbjct: 87  REKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSR--QVGKEKGKY 135


>BC017360-1|AAH17360.1|  145|Homo sapiens ribosomal protein L26-like
           1 protein.
          Length = 145

 Score =  156 bits (378), Expect = 1e-37
 Identities = 69/83 (83%), Positives = 80/83 (96%)
 Frame = -3

Query: 500 VTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQ 321
           VTS R KNRKRHF+APSH+RR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRGHYKGQQ
Sbjct: 7   VTSDRSKNRKRHFNAPSHVRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQ 66

Query: 320 VGKVMQVYRKKFVVYIERIQRER 252
           +GKV+QVYRKK+V+YIER+QRE+
Sbjct: 67  IGKVVQVYRKKYVIYIERVQREK 89



 Score = 69.7 bits (163), Expect = 1e-11
 Identities = 32/51 (62%), Positives = 41/51 (80%)
 Frame = -2

Query: 261 KRKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 109
           + KANG T +VGIHPSK VI +LK++KDRK IL+R+AK R   +GK+KGKY
Sbjct: 87  REKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSR--QVGKEKGKY 135


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,390,304
Number of Sequences: 237096
Number of extensions: 2353620
Number of successful extensions: 5387
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5387
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)