Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10840
(766 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC003555-1|AAH03555.1| 749|Homo sapiens nucleolar complex assoc... 37 0.069
AL645608-6|CAI15568.1| 749|Homo sapiens novel protein protein. 37 0.069
AK092491-1|BAC03905.1| 216|Homo sapiens protein ( Homo sapiens ... 37 0.069
AK022756-1|BAB14230.1| 521|Homo sapiens protein ( Homo sapiens ... 37 0.069
BC060851-1|AAH60851.1| 742|Homo sapiens LOC401010 protein protein. 36 0.21
BC024159-1|AAH24159.2| 858|Homo sapiens leucine rich repeat con... 34 0.48
AL391497-3|CAH72226.1| 858|Homo sapiens leucine rich repeat con... 34 0.48
AL391497-2|CAH72225.1| 313|Homo sapiens leucine rich repeat con... 34 0.48
AF303586-1|AAO32942.1| 914|Homo sapiens NCOR isoform b protein. 31 3.4
AF087856-1|AAP97166.1| 2343|Homo sapiens nuclear receptor co-rep... 31 3.4
AF044209-1|AAC33550.1| 2440|Homo sapiens nuclear receptor co-rep... 31 3.4
AB028970-1|BAA82999.2| 2348|Homo sapiens KIAA1047 protein protein. 31 3.4
BC002789-1|AAH02789.1| 147|Homo sapiens DHX16 protein protein. 31 4.5
BC000126-1|AAH00126.1| 310|Homo sapiens sirtuin (silent mating ... 31 4.5
AL441883-2|CAI19838.1| 310|Homo sapiens sirtuin (silent mating ... 31 4.5
AL441883-1|CAI19837.1| 299|Homo sapiens sirtuin (silent mating ... 31 4.5
AK000355-1|BAA91107.1| 299|Homo sapiens protein ( Homo sapiens ... 31 4.5
AF083110-1|AAD40853.1| 310|Homo sapiens sirtuin type 5 protein. 31 4.5
BC017841-1|AAH17841.1| 403|Homo sapiens ZNF365 protein protein. 31 6.0
AK090970-1|BAC03560.1| 218|Homo sapiens protein ( Homo sapiens ... 30 7.9
>BC003555-1|AAH03555.1| 749|Homo sapiens nucleolar complex
associated 2 homolog (S. cerevisiae) protein.
Length = 749
Score = 37.1 bits (82), Expect = 0.069
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +1
Query: 4 KGTPLKLFFENWNRINQLQKRKKVTNNDEIAG-QMPVIKRRKITEQQVQRPESKGPLVLF 180
+GTPL L++ +W ++ + + +++ + + P IKRRK+ +++ + + L
Sbjct: 611 EGTPLTLYYSHWRKLRDREIQLEISGKERLEDLNFPEIKRRKMADRKDEDRKQFKDLFDL 670
Query: 181 PSDSEDD 201
S EDD
Sbjct: 671 NSSEEDD 677
>AL645608-6|CAI15568.1| 749|Homo sapiens novel protein protein.
Length = 749
Score = 37.1 bits (82), Expect = 0.069
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +1
Query: 4 KGTPLKLFFENWNRINQLQKRKKVTNNDEIAG-QMPVIKRRKITEQQVQRPESKGPLVLF 180
+GTPL L++ +W ++ + + +++ + + P IKRRK+ +++ + + L
Sbjct: 611 EGTPLTLYYSHWRKLRDREIQLEISGKERLEDLNFPEIKRRKMADRKDEDRKQFKDLFDL 670
Query: 181 PSDSEDD 201
S EDD
Sbjct: 671 NSSEEDD 677
>AK092491-1|BAC03905.1| 216|Homo sapiens protein ( Homo sapiens
cDNA FLJ35172 fis, clone PLACE6013232. ).
Length = 216
Score = 37.1 bits (82), Expect = 0.069
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +1
Query: 4 KGTPLKLFFENWNRINQLQKRKKVTNNDEIAG-QMPVIKRRKITEQQVQRPESKGPLVLF 180
+GTPL L++ +W ++ + + +++ + + P IKRRK+ +++ + + L
Sbjct: 73 EGTPLTLYYSHWRKLRDREIQLEISGKERLEDLNFPEIKRRKMADRKDEDRKQFKDLFDL 132
Query: 181 PSDSEDD 201
S EDD
Sbjct: 133 NSSEEDD 139
>AK022756-1|BAB14230.1| 521|Homo sapiens protein ( Homo sapiens
cDNA FLJ12694 fis, clone NT2RP1000358, highly similar to
Homo sapiens mRNA; cDNA DKFZp564C186 (from clone
DKFZp564C186). ).
Length = 521
Score = 37.1 bits (82), Expect = 0.069
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +1
Query: 4 KGTPLKLFFENWNRINQLQKRKKVTNNDEIAG-QMPVIKRRKITEQQVQRPESKGPLVLF 180
+GTPL L++ +W ++ + + +++ + + P IKRRK+ +++ + + L
Sbjct: 378 EGTPLTLYYSHWRKLRDREIQLEISGKERLEDLNFPEIKRRKMADRKDEDRKQFKDLFDL 437
Query: 181 PSDSEDD 201
S EDD
Sbjct: 438 NSSEEDD 444
>BC060851-1|AAH60851.1| 742|Homo sapiens LOC401010 protein protein.
Length = 742
Score = 35.5 bits (78), Expect = 0.21
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +1
Query: 4 KGTPLKLFFENWNRINQLQKRKKVTNNDEIAG-QMPVIKRRKITEQQVQRPESKGPLVLF 180
+GTPL L++ +W ++ + + +++ + + P IKRRK+ +++ + + L
Sbjct: 604 EGTPLTLYYSHWCKLRDWEIQLEISGKERLEDLNFPEIKRRKVADRKDEDRKQFKDLFDL 663
Query: 181 PSDSEDD 201
S EDD
Sbjct: 664 NSCEEDD 670
>BC024159-1|AAH24159.2| 858|Homo sapiens leucine rich repeat
containing 8 family, member D protein.
Length = 858
Score = 34.3 bits (75), Expect = 0.48
Identities = 22/55 (40%), Positives = 26/55 (47%)
Frame = +2
Query: 134 NNKYSGRRARDLSFCSPQTVKTMRDQTLRRTKMRNHHALPSQEAKEEEDAKENRK 298
N GR D+SF T D LR T R ALP+QEAK+E+ RK
Sbjct: 87 NQDQDGRTTNDISF---GTSAVTPDIPLRATYPRTDFALPNQEAKKEKKDPTGRK 138
>AL391497-3|CAH72226.1| 858|Homo sapiens leucine rich repeat
containing 8 family, member D protein.
Length = 858
Score = 34.3 bits (75), Expect = 0.48
Identities = 22/55 (40%), Positives = 26/55 (47%)
Frame = +2
Query: 134 NNKYSGRRARDLSFCSPQTVKTMRDQTLRRTKMRNHHALPSQEAKEEEDAKENRK 298
N GR D+SF T D LR T R ALP+QEAK+E+ RK
Sbjct: 87 NQDQDGRTTNDISF---GTSAVTPDIPLRATYPRTDFALPNQEAKKEKKDPTGRK 138
>AL391497-2|CAH72225.1| 313|Homo sapiens leucine rich repeat
containing 8 family, member D protein.
Length = 313
Score = 34.3 bits (75), Expect = 0.48
Identities = 22/55 (40%), Positives = 26/55 (47%)
Frame = +2
Query: 134 NNKYSGRRARDLSFCSPQTVKTMRDQTLRRTKMRNHHALPSQEAKEEEDAKENRK 298
N GR D+SF T D LR T R ALP+QEAK+E+ RK
Sbjct: 87 NQDQDGRTTNDISF---GTSAVTPDIPLRATYPRTDFALPNQEAKKEKKDPTGRK 138
>AF303586-1|AAO32942.1| 914|Homo sapiens NCOR isoform b protein.
Length = 914
Score = 31.5 bits (68), Expect = 3.4
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +2
Query: 143 YSGRRARDLSFCSP---QTVKTMRDQTLRRTKMRNHHALPSQEAKEEEDAKENRKKK 304
Y RR R+ P + V+ + +T+ + +E E+ED+KEN K+K
Sbjct: 386 YGKRRGRNQQIARPSQEEKVEEKEEDKAEKTEKKEEEKKDEEEKDEKEDSKENTKEK 442
>AF087856-1|AAP97166.1| 2343|Homo sapiens nuclear receptor
co-repressor protein.
Length = 2343
Score = 31.5 bits (68), Expect = 3.4
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +2
Query: 143 YSGRRARDLSFCSP---QTVKTMRDQTLRRTKMRNHHALPSQEAKEEEDAKENRKKK 304
Y RR R+ P + V+ + +T+ + +E E+ED+KEN K+K
Sbjct: 386 YGKRRGRNQQIARPSQEEKVEEKEEDKAEKTEKKEEEKKDEEEKDEKEDSKENTKEK 442
>AF044209-1|AAC33550.1| 2440|Homo sapiens nuclear receptor
co-repressor N-CoR protein.
Length = 2440
Score = 31.5 bits (68), Expect = 3.4
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +2
Query: 143 YSGRRARDLSFCSP---QTVKTMRDQTLRRTKMRNHHALPSQEAKEEEDAKENRKKK 304
Y RR R+ P + V+ + +T+ + +E E+ED+KEN K+K
Sbjct: 495 YGKRRGRNQQIARPSQEEKVEEKEEDKAEKTEKKEEEKKDEEEKDEKEDSKENTKEK 551
>AB028970-1|BAA82999.2| 2348|Homo sapiens KIAA1047 protein protein.
Length = 2348
Score = 31.5 bits (68), Expect = 3.4
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +2
Query: 143 YSGRRARDLSFCSP---QTVKTMRDQTLRRTKMRNHHALPSQEAKEEEDAKENRKKK 304
Y RR R+ P + V+ + +T+ + +E E+ED+KEN K+K
Sbjct: 506 YGKRRGRNQQIARPSQEEKVEEKEEDKAEKTEKKEEEKKDEEEKDEKEDSKENTKEK 562
>BC002789-1|AAH02789.1| 147|Homo sapiens DHX16 protein protein.
Length = 147
Score = 31.1 bits (67), Expect = 4.5
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +2
Query: 107 RSSNDVKSPNNKYSGRRARDLSFCSPQTVKTMRDQTLRRTKMRNHHALPSQEAKEEEDAK 286
R + + N Y R D S +TV + +L++ + + H +E +EEE+A
Sbjct: 85 REARALLEKNRSY--RLLEDSEESSEETV-SRAGSSLQKKRKKRKHLRKKREEEEEEEAS 141
Query: 287 ENRKKK 304
E +KKK
Sbjct: 142 EKKKKK 147
>BC000126-1|AAH00126.1| 310|Homo sapiens sirtuin (silent mating
type information regulation 2 homolog) 5 (S. cerevisiae)
protein.
Length = 310
Score = 31.1 bits (67), Expect = 4.5
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 167 GPLLSGRCTCCSVILRRLMTGICPAIS 87
G L RCT C V+ + ICPA+S
Sbjct: 159 GSLFKTRCTSCGVVAENYKSPICPALS 185
>AL441883-2|CAI19838.1| 310|Homo sapiens sirtuin (silent mating
type information regulation 2 homolog) 5 (S. cerevisiae)
protein.
Length = 310
Score = 31.1 bits (67), Expect = 4.5
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 167 GPLLSGRCTCCSVILRRLMTGICPAIS 87
G L RCT C V+ + ICPA+S
Sbjct: 159 GSLFKTRCTSCGVVAENYKSPICPALS 185
>AL441883-1|CAI19837.1| 299|Homo sapiens sirtuin (silent mating
type information regulation 2 homolog) 5 (S. cerevisiae)
protein.
Length = 299
Score = 31.1 bits (67), Expect = 4.5
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 167 GPLLSGRCTCCSVILRRLMTGICPAIS 87
G L RCT C V+ + ICPA+S
Sbjct: 159 GSLFKTRCTSCGVVAENYKSPICPALS 185
>AK000355-1|BAA91107.1| 299|Homo sapiens protein ( Homo sapiens
cDNA FLJ20348 fis, clone HEP13915. ).
Length = 299
Score = 31.1 bits (67), Expect = 4.5
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 167 GPLLSGRCTCCSVILRRLMTGICPAIS 87
G L RCT C V+ + ICPA+S
Sbjct: 159 GSLFKTRCTSCGVVAENYKSPICPALS 185
>AF083110-1|AAD40853.1| 310|Homo sapiens sirtuin type 5 protein.
Length = 310
Score = 31.1 bits (67), Expect = 4.5
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 167 GPLLSGRCTCCSVILRRLMTGICPAIS 87
G L RCT C V+ + ICPA+S
Sbjct: 159 GSLFKTRCTSCGVVAENYKSPICPALS 185
>BC017841-1|AAH17841.1| 403|Homo sapiens ZNF365 protein protein.
Length = 403
Score = 30.7 bits (66), Expect = 6.0
Identities = 13/25 (52%), Positives = 20/25 (80%), Gaps = 4/25 (16%)
Frame = -3
Query: 545 PPRRGDLVG----GSARPEKKRKKK 483
PP++G+L+G G+ RP+KK+KKK
Sbjct: 376 PPKKGELLGFGRKGNIRPKKKKKKK 400
>AK090970-1|BAC03560.1| 218|Homo sapiens protein ( Homo sapiens
cDNA FLJ33651 fis, clone BRAMY2024535. ).
Length = 218
Score = 30.3 bits (65), Expect = 7.9
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = -1
Query: 598 PWARGLLPTPCRSLRSAHPLGAGTS*EVRPGQXXXXXXKCCQPRKRSL 455
PW+ GL P L AHP G G +P C P + +L
Sbjct: 92 PWSAGLQAPPAVPLSRAHPGGGGGGGASQPRSQPQGRLGTCSPARPTL 139
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,657,901
Number of Sequences: 237096
Number of extensions: 2338409
Number of successful extensions: 6560
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 6151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6526
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9199990470
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -