Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10839
(688 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17377| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 6e-20
SB_34145| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.16
SB_32795| Best HMM Match : tRNA_anti (HMM E-Value=4.8e-11) 33 0.22
SB_7978| Best HMM Match : F5_F8_type_C (HMM E-Value=1.2e-22) 32 0.38
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.66
SB_21429| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.87
SB_3054| Best HMM Match : RVT_1 (HMM E-Value=1.6e-09) 31 0.87
SB_664| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.87
SB_56211| Best HMM Match : SRP19 (HMM E-Value=0.51) 31 1.2
SB_59332| Best HMM Match : Pap_E4 (HMM E-Value=3.3) 30 1.5
SB_48561| Best HMM Match : AAA (HMM E-Value=0) 30 1.5
SB_42039| Best HMM Match : DUF1299 (HMM E-Value=9.6) 30 1.5
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_10201| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_44756| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_39472| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_38293| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_16861| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_58648| Best HMM Match : Helicase_C (HMM E-Value=2.2e-14) 29 3.5
SB_16232| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_7981| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_12106| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_33549| Best HMM Match : Collagen (HMM E-Value=2e-05) 29 4.7
SB_17696| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23) 29 4.7
SB_11869| Best HMM Match : Excalibur (HMM E-Value=8) 28 6.2
SB_28477| Best HMM Match : 7tm_1 (HMM E-Value=4.6e-20) 28 6.2
SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_20267| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
>SB_17377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 466
Score = 94.7 bits (225), Expect = 6e-20
Identities = 46/85 (54%), Positives = 60/85 (70%)
Frame = +1
Query: 1 VYTIQEVIDEITNDRQRKKLVVLPYDLKVKDVFADNIKFITEFSKKTGDYSSLSATDIKV 180
VYTI EV+ EI + R+ L VLPY+++ + + +K +TEFSK TGD+ LSA D++V
Sbjct: 35 VYTISEVVSEIKDAATRQSLAVLPYEIQFRQPSTEALKAVTEFSKLTGDFKVLSAVDLRV 94
Query: 181 MALTYQLEKEKVGGTEHLKDEPTMQ 255
MALTYQLEKE G EHLK +PT Q
Sbjct: 95 MALTYQLEKE-FCGVEHLKTKPTQQ 118
>SB_34145| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 679
Score = 33.5 bits (73), Expect = 0.16
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 300 NYENANQETGEKDSNANNNKETSEPLQQPIGETVNVETGESFEV 431
N E++N GE+D NN+ +P + IG+ V +E FE+
Sbjct: 103 NIESSNANDGEQDGGDNNSTTDEKPPVEMIGDRVLIERDGKFEL 146
>SB_32795| Best HMM Match : tRNA_anti (HMM E-Value=4.8e-11)
Length = 305
Score = 33.1 bits (72), Expect = 0.22
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +1
Query: 130 SKKTGD-YSSLSATDIKVMALTYQLEKEKVGGTEHLKDEPTMQNLLKLQDWLGLTFIPIM 306
SK G+ + ++ +K YQ EK K E + E Q L+D +T P
Sbjct: 106 SKAEGERFEKIAKAQLKKATKLYQQEKRKSEEREKKEAEKAQQREKNLEDARNITIKPDE 165
Query: 307 KMPIRKQVR 333
+P+ KQ++
Sbjct: 166 SLPVAKQIK 174
>SB_7978| Best HMM Match : F5_F8_type_C (HMM E-Value=1.2e-22)
Length = 1151
Score = 32.3 bits (70), Expect = 0.38
Identities = 18/61 (29%), Positives = 34/61 (55%)
Frame = +3
Query: 330 EKDSNANNNKETSEPLQQPIGETVNVETGESFEVKHQQNCQTTTNETDDDKLAEEISKQI 509
E +N +NN ++ QQP N T + + + QQ+ TTTN +++K ++I+K +
Sbjct: 689 ETRTNNSNNNNSNHTQQQPNINNKNSHTQQQKQKQPQQS--TTTNTLNNNKNTQQITKTL 746
Query: 510 M 512
+
Sbjct: 747 I 747
Score = 31.5 bits (68), Expect = 0.66
Identities = 17/76 (22%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +3
Query: 288 NLHPNYENANQETGEKDSNANNNKETSEPLQQPIGETVNVETGE-SFEVKHQQNCQTTTN 464
N H + Q +N NN + ++ + + + +N+ + + K QQ TTTN
Sbjct: 713 NSHTQQQKQKQPQQSTTTNTLNNNKNTQQITKTL---ININNNNPTQQQKQQQQQSTTTN 769
Query: 465 ETDDDKLAEEISKQIM 512
+++K ++I+K ++
Sbjct: 770 TLNNNKNTQQITKTLI 785
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 31.5 bits (68), Expect = 0.66
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = +3
Query: 288 NLHPN--YENANQETGEKDSNANNNKETSEPLQQPIGETVNVETGESFEVKHQQNCQTTT 461
NL PN Y+ NQ T N N+ T++P QP + N T + Q T
Sbjct: 203 NLPPNQPYKQTNQPT-----NQPTNQPTNQPTNQPTNQPTNQPTNQPTNQPTNQPTNQPT 257
Query: 462 NETD 473
N+T+
Sbjct: 258 NQTN 261
>SB_21429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 840
Score = 31.1 bits (67), Expect = 0.87
Identities = 20/53 (37%), Positives = 26/53 (49%)
Frame = +1
Query: 136 KTGDYSSLSATDIKVMALTYQLEKEKVGGTEHLKDEPTMQNLLKLQDWLGLTF 294
K G++ +SA + L QL K K G E LKD+ + L L W GL F
Sbjct: 186 KQGEHEEVSAFASR---LDTQLRKAKEQGAELLKDDDALSKHLSLIFWEGLLF 235
>SB_3054| Best HMM Match : RVT_1 (HMM E-Value=1.6e-09)
Length = 829
Score = 31.1 bits (67), Expect = 0.87
Identities = 20/53 (37%), Positives = 26/53 (49%)
Frame = +1
Query: 136 KTGDYSSLSATDIKVMALTYQLEKEKVGGTEHLKDEPTMQNLLKLQDWLGLTF 294
K G++ +SA + L QL K K G E LKD+ + L L W GL F
Sbjct: 186 KQGEHEEVSAFASR---LDTQLRKAKEQGAELLKDDDALSKHLSLIFWEGLLF 235
>SB_664| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1046
Score = 31.1 bits (67), Expect = 0.87
Identities = 20/53 (37%), Positives = 26/53 (49%)
Frame = +1
Query: 136 KTGDYSSLSATDIKVMALTYQLEKEKVGGTEHLKDEPTMQNLLKLQDWLGLTF 294
K G++ +SA + L QL K K G E LKD+ + L L W GL F
Sbjct: 933 KQGEHEEVSAFASR---LDTQLRKAKEQGAELLKDDDALSKHLSLIFWEGLLF 982
>SB_56211| Best HMM Match : SRP19 (HMM E-Value=0.51)
Length = 488
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/63 (26%), Positives = 28/63 (44%)
Frame = +1
Query: 319 RKQVRKTLMQTITKRPVNLYNNL*ERL*MLKLESHLKSNTNKTVKQQQMKLMMINWLKKF 498
RK R T+ + L NL R + L+ HL++ TV+ Q +M W+ +
Sbjct: 104 RKDSRDFEQDTLLRINTTLLRNLEARYLLPTLKKHLETPERNTVQDSQSSMMGQQWMTQM 163
Query: 499 QNK 507
N+
Sbjct: 164 TNQ 166
>SB_59332| Best HMM Match : Pap_E4 (HMM E-Value=3.3)
Length = 286
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +3
Query: 294 HPNYENANQETGEKDSNANNNKETSEPLQQPIGETVNVETGESFE 428
H N N N ++N NNN ET + P+GE + E+ E
Sbjct: 8 HDNNNNNNNNNNNNNNNNNNNNETDD---APVGEENHAGDAETTE 49
>SB_48561| Best HMM Match : AAA (HMM E-Value=0)
Length = 2021
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Frame = +3
Query: 291 LHPNYENANQETGEKDSNANNNKETSEPLQQP----IGETVNVETGESFEVKHQQNCQTT 458
+HP +EN N++ EK ++ S+ + + +TV VKH Q Q
Sbjct: 705 VHPTFENYNEKADEKQRKRRVLEDPSDDSEDERAVNMYDTVKRRHDTPSPVKHGQRHQQE 764
Query: 459 TNETDDDKLAEE 494
++ DDD +E
Sbjct: 765 EDDEDDDSDDDE 776
>SB_42039| Best HMM Match : DUF1299 (HMM E-Value=9.6)
Length = 63
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +3
Query: 294 HPNYENANQETGEKDSNANNNKETSEPLQQPIGETVNVETGESFE 428
H N N N ++N NNN ET + P+GE + E+ E
Sbjct: 8 HDNNNNNNNNNNNNNNNNNNNNETDD---APVGEENHAGDAETTE 49
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +1
Query: 202 EKEKVGGTEHLKDEPTMQNLLKLQDWLGLTFIPIMKMPIRKQ--VRKTLMQTITKRPVNL 375
EKEK G E L ++ +L+ + +W GL P + + Q + T +Q+++ P L
Sbjct: 107 EKEKGGDAEGLSNQKVKGSLIDMPEWEGLGVAPDILRALGDQGFSKPTPIQSLSIPPALL 166
Query: 376 YN 381
Y+
Sbjct: 167 YH 168
>SB_10201| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1162
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 309 NANQETGEKDSNANNNKETS-EPLQQPIGETVNVETGESFE 428
NA QE G+ D + NNN S E P+GE + E+ E
Sbjct: 1108 NARQEDGDLDKHDNNNNNNSNETDDAPVGEENHAGDAETTE 1148
>SB_44756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 320
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/67 (25%), Positives = 25/67 (37%)
Frame = +3
Query: 300 NYENANQETGEKDSNANNNKETSEPLQQPIGETVNVETGESFEVKHQQNCQTTTNETDDD 479
NY E S NN+ + +E E + + E+F K +N T E
Sbjct: 168 NYSTKATENYSTKSKENNSTKATENYSTKATEKYSTKATENFSTKATENYSTKATEKYST 227
Query: 480 KLAEEIS 500
K +E S
Sbjct: 228 KASENYS 234
>SB_39472| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/67 (26%), Positives = 28/67 (41%)
Frame = +3
Query: 297 PNYENANQETGEKDSNANNNKETSEPLQQPIGETVNVETGESFEVKHQQNCQTTTNETDD 476
P + NQ TG++ N+ T + + P G+ N TG+ F Q T +
Sbjct: 91 PTGQQPNQPTGQQP-----NQPTGQQPKDPTGQQPNDPTGKQFNQPTGQQLTDPTGQQPT 145
Query: 477 DKLAEEI 497
D E+I
Sbjct: 146 DPTGEQI 152
>SB_38293| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1732
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -1
Query: 436 CLTSNDSPVSTFTVSPIGCCKGSLVSLLLFALESFSPV 323
CLT +P +T +V+ C+G V+L A +SF PV
Sbjct: 224 CLTVQYAPNATISVNTTLVCQGDHVALTCTAGDSFPPV 261
>SB_16861| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2214
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +3
Query: 300 NYENANQETGEKDSNANNNKETSEPLQQPIGETVNVETGESFEVKH--QQNCQTTTNETD 473
N N N + ++N++N+K+T+ + T T + + + QQ TTT T
Sbjct: 860 NSNNGNNKNNSNNNNSSNSKKTTTTVITTTATTATTTTTATAKKQQQLQQKTTTTTKTTT 919
Query: 474 DDKLAE 491
K A+
Sbjct: 920 TTKKAK 925
>SB_58648| Best HMM Match : Helicase_C (HMM E-Value=2.2e-14)
Length = 679
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = -2
Query: 174 NICSREARIITCFLREFSNEFYVICEDILDF*VVWKDNEL 55
NIC AR I L E N+ V CE ++D + DNEL
Sbjct: 580 NIC--HAREIVVMLAEVFNDIDVSCEQMVDMRLGTSDNEL 617
>SB_16232| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 492
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = -2
Query: 174 NICSREARIITCFLREFSNEFYVICEDILDF*VVWKDNEL 55
NIC AR I L E N+ V CE ++D + DNEL
Sbjct: 393 NIC--HAREIVVMLAEVFNDIDVSCEQMVDMRLGTSDNEL 430
>SB_7981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 113
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
Frame = +3
Query: 306 ENANQETG-----EKDSNANNNKETSEPLQQPIGETVNVETGE 419
E NQE G E++ N +E E + Q GE VN E GE
Sbjct: 25 EEVNQEEGEEVNEEEEGKEMNEEEEGEEVNQEEGEEVNQEEGE 67
>SB_12106| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/79 (20%), Positives = 37/79 (46%)
Frame = +3
Query: 267 VTGLAGFNLHPNYENANQETGEKDSNANNNKETSEPLQQPIGETVNVETGESFEVKHQQN 446
+T N++ N +N N + K N +N+ +T+ + + N + ++ N
Sbjct: 28 ITRTTNININENNDNTNDD-NNKHINDDNDNKTNNNDKDTNDDNTNEDNDKN--NNDDNN 84
Query: 447 CQTTTNETDDDKLAEEISK 503
+T N+T+D+ + ++ K
Sbjct: 85 NKTNDNDTNDENINDDNEK 103
>SB_33549| Best HMM Match : Collagen (HMM E-Value=2e-05)
Length = 346
Score = 28.7 bits (61), Expect = 4.7
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +3
Query: 345 ANNNKETSEPLQQPIGETVNVETGESFEVKHQQNCQT-TTNETDDDKLAEEISKQIMIW 518
ANN TS L I ET +V Q +CQ T +T D+L +SK + +W
Sbjct: 184 ANNPNMTSRELATDI-ETDHVVRTLKTYCAGQHSCQAPATRKTFGDELQPRVSKYLKVW 241
>SB_17696| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 202 EKEKVGGTEHLKDEPTMQNLLKLQDWLGLTFIPIMKMPIRKQ--VRKTLMQTITKRPVNL 375
EKEK E L ++ +L+ + +W GL P + + Q + T +Q+++ P L
Sbjct: 49 EKEKGSDAEGLSNQKVQGSLIDMSEWEGLGVAPDILRALGDQGFSKPTPIQSLSIPPALL 108
Query: 376 YN 381
Y+
Sbjct: 109 YH 110
>SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23)
Length = 3368
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/59 (22%), Positives = 25/59 (42%)
Frame = +3
Query: 288 NLHPNYENANQETGEKDSNANNNKETSEPLQQPIGETVNVETGESFEVKHQQNCQTTTN 464
N PN++ + + T + + T+EP+ + T T + + N + TTN
Sbjct: 3083 NSKPNHKKSTRPTTDNKQQSQPQTTTAEPITKTTSTTAKPTTNNNSKPTTNNNSKPTTN 3141
>SB_11869| Best HMM Match : Excalibur (HMM E-Value=8)
Length = 269
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +3
Query: 288 NLHPNYENANQETGEKDSNANNNKETSEPLQQPIGETVNVETGES 422
N P + +Q +K A + SEP ++P+GE V E+
Sbjct: 56 NEQPKHVPTSQPPNDKADGAGCEQVESEPREEPVGEEAKVSHQET 100
>SB_28477| Best HMM Match : 7tm_1 (HMM E-Value=4.6e-20)
Length = 351
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -3
Query: 356 VIVCIRVFLTCFLIGIFIIGMKVKPSQSCNFNRFCIVGSSL 234
V++ + T F +GIF+I V+ + +C F F +V ++
Sbjct: 244 VVLAFALCFTPFYVGIFMIITDVRSTLTCRFQIFWLVARTM 284
>SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/53 (26%), Positives = 22/53 (41%)
Frame = +3
Query: 288 NLHPNYENANQETGEKDSNANNNKETSEPLQQPIGETVNVETGESFEVKHQQN 446
N + N N N D+N++NN + + N E G E+K +N
Sbjct: 608 NNNNNNNNNNNNDNNSDNNSDNNSDNNSDNNSDNNNDNNSERGADPEIKRGKN 660
>SB_20267| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 415
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/61 (22%), Positives = 26/61 (42%)
Frame = +3
Query: 300 NYENANQETGEKDSNANNNKETSEPLQQPIGETVNVETGESFEVKHQQNCQTTTNETDDD 479
NY N + + D+N NN+K + G N + ++ + + N N ++D
Sbjct: 211 NYNYDNNDNNDNDNNDNNDKNDNNDNNDNNGNNDNYDNNDNND--NNDNNDNNDNNDNND 268
Query: 480 K 482
K
Sbjct: 269 K 269
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,596,953
Number of Sequences: 59808
Number of extensions: 321022
Number of successful extensions: 1169
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1145
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1781448916
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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