SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10839
         (688 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024812-1|AAF59552.2|  364|Caenorhabditis elegans Hypothetical ...    55   4e-08
AF099001-6|AAC68738.2|  661|Caenorhabditis elegans Lateral signa...    32   0.33 
AF039046-13|AAB94213.1|  551|Caenorhabditis elegans Hypothetical...    31   0.77 
Z83241-5|CAH10791.1| 1183|Caenorhabditis elegans Hypothetical pr...    31   1.0  
Z83241-4|CAB05819.3| 1181|Caenorhabditis elegans Hypothetical pr...    31   1.0  
Z81120-11|CAH10815.1| 1183|Caenorhabditis elegans Hypothetical p...    31   1.0  
Z81120-10|CAB03350.3| 1181|Caenorhabditis elegans Hypothetical p...    31   1.0  
Z79755-3|CAB02108.1|  355|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z70306-1|CAA94322.1|  355|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical p...    29   3.1  
Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical p...    29   3.1  
Z46267-13|CAH04746.1|  845|Caenorhabditis elegans Hypothetical p...    29   3.1  
Z46267-9|CAA86427.2|  889|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z46267-8|CAA86424.2| 1030|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z46267-7|CAA86429.2|  947|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z77663-3|CAB01212.1|  229|Caenorhabditis elegans Hypothetical pr...    29   4.1  
Z49132-7|CAA88986.1|  403|Caenorhabditis elegans Hypothetical pr...    28   5.4  
U53147-2|AAA96114.2|  935|Caenorhabditis elegans Hypothetical pr...    28   5.4  
Z99278-4|CAB16492.1|  871|Caenorhabditis elegans Hypothetical pr...    28   7.2  
Z99278-3|CAB16493.1|  867|Caenorhabditis elegans Hypothetical pr...    28   7.2  
U97593-7|AAB52878.1|  591|Caenorhabditis elegans Prion-like-(q/n...    28   7.2  
U97593-5|AAB52880.1| 1175|Caenorhabditis elegans Prion-like-(q/n...    28   7.2  
Z66522-7|CAA91409.2|  472|Caenorhabditis elegans Hypothetical pr...    27   9.5  
Z66520-13|CAA91392.2|  472|Caenorhabditis elegans Hypothetical p...    27   9.5  
Z50872-3|CAA90756.1|  238|Caenorhabditis elegans Hypothetical pr...    27   9.5  
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ...    27   9.5  

>AC024812-1|AAF59552.2|  364|Caenorhabditis elegans Hypothetical
           protein Y54E10BR.4 protein.
          Length = 364

 Score = 55.2 bits (127), Expect = 4e-08
 Identities = 24/71 (33%), Positives = 44/71 (61%)
 Frame = +1

Query: 4   YTIQEVIDEITNDRQRKKLVVLPYDLKVKDVFADNIKFITEFSKKTGDYSSLSATDIKVM 183
           Y   +++DE+ +   RK    LP+++ +++     ++ + + SK TGD+ SLS  DIK++
Sbjct: 32  YAPPQILDELRSSAARKLWNTLPFEVTLREPTQTALRAVIDASKTTGDFQSLSMVDIKMI 91

Query: 184 ALTYQLEKEKV 216
           ALTY L ++ V
Sbjct: 92  ALTYDLHRQYV 102


>AF099001-6|AAC68738.2|  661|Caenorhabditis elegans Lateral
           signaling target protein 2 protein.
          Length = 661

 Score = 32.3 bits (70), Expect = 0.33
 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
 Frame = +3

Query: 300 NYENANQETGEKDSNANNNKETSEPLQQP--IGETVNVETGESFEVKHQQNCQTTTNETD 473
           N      E G+ ++   N+  ++E  + P  I E  NV+  ES E +   +   T NE+D
Sbjct: 365 NVSQIENEEGDDEAIGTNSNSSNEVTESPETIEEPDNVDMEESSESEVDTHIDETRNESD 424

Query: 474 DD 479
           D+
Sbjct: 425 DE 426


>AF039046-13|AAB94213.1|  551|Caenorhabditis elegans Hypothetical
           protein R09B5.4 protein.
          Length = 551

 Score = 31.1 bits (67), Expect = 0.77
 Identities = 11/28 (39%), Positives = 20/28 (71%)
 Frame = -2

Query: 183 HNLNICSREARIITCFLREFSNEFYVIC 100
           +NL+IC+  A IITC   + ++ +Y++C
Sbjct: 135 NNLSICAAAALIITCLSIDATSPWYIVC 162


>Z83241-5|CAH10791.1| 1183|Caenorhabditis elegans Hypothetical
           protein T12D8.9b protein.
          Length = 1183

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 18/67 (26%), Positives = 32/67 (47%)
 Frame = +3

Query: 306 ENANQETGEKDSNANNNKETSEPLQQPIGETVNVETGESFEVKHQQNCQTTTNETDDDKL 485
           E+ ++   EK+SN  N+K   EP  +P  E   V+  +    K +        E+ D++ 
Sbjct: 684 ESESEPEPEKNSNKKNSKRVKEPEPEPEEEPEPVKKSKRSLKKVKVAVPDPAPESKDEEN 743

Query: 486 AEEISKQ 506
            E +S+Q
Sbjct: 744 EESVSEQ 750


>Z83241-4|CAB05819.3| 1181|Caenorhabditis elegans Hypothetical
           protein T12D8.9a protein.
          Length = 1181

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 18/67 (26%), Positives = 32/67 (47%)
 Frame = +3

Query: 306 ENANQETGEKDSNANNNKETSEPLQQPIGETVNVETGESFEVKHQQNCQTTTNETDDDKL 485
           E+ ++   EK+SN  N+K   EP  +P  E   V+  +    K +        E+ D++ 
Sbjct: 682 ESESEPEPEKNSNKKNSKRVKEPEPEPEEEPEPVKKSKRSLKKVKVAVPDPAPESKDEEN 741

Query: 486 AEEISKQ 506
            E +S+Q
Sbjct: 742 EESVSEQ 748


>Z81120-11|CAH10815.1| 1183|Caenorhabditis elegans Hypothetical
           protein T12D8.9b protein.
          Length = 1183

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 18/67 (26%), Positives = 32/67 (47%)
 Frame = +3

Query: 306 ENANQETGEKDSNANNNKETSEPLQQPIGETVNVETGESFEVKHQQNCQTTTNETDDDKL 485
           E+ ++   EK+SN  N+K   EP  +P  E   V+  +    K +        E+ D++ 
Sbjct: 684 ESESEPEPEKNSNKKNSKRVKEPEPEPEEEPEPVKKSKRSLKKVKVAVPDPAPESKDEEN 743

Query: 486 AEEISKQ 506
            E +S+Q
Sbjct: 744 EESVSEQ 750


>Z81120-10|CAB03350.3| 1181|Caenorhabditis elegans Hypothetical
           protein T12D8.9a protein.
          Length = 1181

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 18/67 (26%), Positives = 32/67 (47%)
 Frame = +3

Query: 306 ENANQETGEKDSNANNNKETSEPLQQPIGETVNVETGESFEVKHQQNCQTTTNETDDDKL 485
           E+ ++   EK+SN  N+K   EP  +P  E   V+  +    K +        E+ D++ 
Sbjct: 682 ESESEPEPEKNSNKKNSKRVKEPEPEPEEEPEPVKKSKRSLKKVKVAVPDPAPESKDEEN 741

Query: 486 AEEISKQ 506
            E +S+Q
Sbjct: 742 EESVSEQ 748


>Z79755-3|CAB02108.1|  355|Caenorhabditis elegans Hypothetical
           protein F43G9.4 protein.
          Length = 355

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
 Frame = +3

Query: 303 YENANQET-GEKDSNANNNKETSEPLQQPIGETVNVETGESFEVKHQQNCQTTTNETDDD 479
           Y ++N +T G    +       SE +++  GE    +TG+  + K + + +   NE DD+
Sbjct: 93  YLSSNGKTRGSNIQSLGEAAGGSEKMKKMNGEVTKNKTGKPEKRKKKVDSEQQENEEDDE 152

Query: 480 KLAEEISKQ 506
            L   +SK+
Sbjct: 153 DLMSPVSKK 161


>Z70306-1|CAA94322.1|  355|Caenorhabditis elegans Hypothetical
           protein C06G8.1 protein.
          Length = 355

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 11/41 (26%), Positives = 21/41 (51%)
 Frame = -1

Query: 445 FCWCLTSNDSPVSTFTVSPIGCCKGSLVSLLLFALESFSPV 323
           F WC+T     +S   +  IG C   ++++  F ++ F P+
Sbjct: 90  FYWCMTKKKLYISLKVLGVIGICTSLVLAVHFFGMKIFHPL 130


>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
           protein K01A6.2 protein.
          Length = 1092

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
 Frame = +3

Query: 210 EGWRYGTSQR*TDYAKS-VKVTGLAGFNLHPNYENANQETGEKDSNANNNKETS--EPLQ 380
           +G  YGT +    YA   + + G  G  L PN+E A  E G+K    +N   T+  +P +
Sbjct: 273 QGHLYGTPRPVECYADDDMMLMGSEGL-LPPNWETAYTENGDKYFIDHNTGTTTWDDPRE 331

Query: 381 QPIG-ETVNVETGESFEVKH 437
            P G E V+ +   +F V H
Sbjct: 332 LPPGWEQVDDQNYGTFYVDH 351


>Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical
           protein F49E2.5j protein.
          Length = 1100

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = +3

Query: 291 LHPNYENANQETGEKDSNANNNKETSEPLQQPIGETVNVETGESFE 428
           +H   E A    G+K +  N NK+ SE    P  E V   T E  E
Sbjct: 670 VHAENETAAAAGGKKKNKKNKNKKNSESESTPAAEPVKEVTPEIVE 715


>Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical
           protein F49E2.5i protein.
          Length = 1030

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = +3

Query: 291 LHPNYENANQETGEKDSNANNNKETSEPLQQPIGETVNVETGESFE 428
           +H   E A    G+K +  N NK+ SE    P  E V   T E  E
Sbjct: 600 VHAENETAAAAGGKKKNKKNKNKKNSESESTPAAEPVKEVTPEIVE 645


>Z46267-13|CAH04746.1|  845|Caenorhabditis elegans Hypothetical
           protein F49E2.5h protein.
          Length = 845

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = +3

Query: 291 LHPNYENANQETGEKDSNANNNKETSEPLQQPIGETVNVETGESFE 428
           +H   E A    G+K +  N NK+ SE    P  E V   T E  E
Sbjct: 415 VHAENETAAAAGGKKKNKKNKNKKNSESESTPAAEPVKEVTPEIVE 460


>Z46267-9|CAA86427.2|  889|Caenorhabditis elegans Hypothetical
           protein F49E2.5d protein.
          Length = 889

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = +3

Query: 291 LHPNYENANQETGEKDSNANNNKETSEPLQQPIGETVNVETGESFE 428
           +H   E A    G+K +  N NK+ SE    P  E V   T E  E
Sbjct: 459 VHAENETAAAAGGKKKNKKNKNKKNSESESTPAAEPVKEVTPEIVE 504


>Z46267-8|CAA86424.2| 1030|Caenorhabditis elegans Hypothetical
           protein F49E2.5c protein.
          Length = 1030

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = +3

Query: 291 LHPNYENANQETGEKDSNANNNKETSEPLQQPIGETVNVETGESFE 428
           +H   E A    G+K +  N NK+ SE    P  E V   T E  E
Sbjct: 600 VHAENETAAAAGGKKKNKKNKNKKNSESESTPAAEPVKEVTPEIVE 645


>Z46267-7|CAA86429.2|  947|Caenorhabditis elegans Hypothetical
           protein F49E2.5b protein.
          Length = 947

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = +3

Query: 291 LHPNYENANQETGEKDSNANNNKETSEPLQQPIGETVNVETGESFE 428
           +H   E A    G+K +  N NK+ SE    P  E V   T E  E
Sbjct: 517 VHAENETAAAAGGKKKNKKNKNKKNSESESTPAAEPVKEVTPEIVE 562


>Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical
           protein F49E2.5a protein.
          Length = 1215

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = +3

Query: 291 LHPNYENANQETGEKDSNANNNKETSEPLQQPIGETVNVETGESFE 428
           +H   E A    G+K +  N NK+ SE    P  E V   T E  E
Sbjct: 785 VHAENETAAAAGGKKKNKKNKNKKNSESESTPAAEPVKEVTPEIVE 830


>Z77663-3|CAB01212.1|  229|Caenorhabditis elegans Hypothetical
           protein F53F4.3 protein.
          Length = 229

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 1/92 (1%)
 Frame = +3

Query: 243 TDYAKSVKVTGLA-GFNLHPNYENANQETGEKDSNANNNKETSEPLQQPIGETVNVETGE 419
           TD AKS+K  G+  G+ +H      +   G +D    +  E  E      G+  +     
Sbjct: 62  TDGAKSLKDLGVRDGYRIHA----VDVTGGNEDFKDESMVEKYEMSDDTYGKRTDSVRAW 117

Query: 420 SFEVKHQQNCQTTTNETDDDKLAEEISKQIMI 515
             +++ +Q       E + DKL EE +K IM+
Sbjct: 118 KKKMQEEQG-SAAPMENESDKLNEEAAKNIMV 148


>Z49132-7|CAA88986.1|  403|Caenorhabditis elegans Hypothetical
           protein ZK666.7 protein.
          Length = 403

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = -3

Query: 350 VCIRVFLTCFLIGI-FIIGMKVKPSQSC 270
           + ++  LTCFL+GI F +G  V  S +C
Sbjct: 1   MAMKFLLTCFLLGITFCLGSPVSQSSNC 28


>U53147-2|AAA96114.2|  935|Caenorhabditis elegans Hypothetical
           protein C01B7.1a protein.
          Length = 935

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = +3

Query: 330 EKDSNANNNKETSEPLQQPIGETVNVETGESFEVKHQQNCQTTTNETDDD 479
           E+ SN +  KE  +PL   + +    E GE  EV+H+Q  +    E D+D
Sbjct: 685 EEASNDSAIKEEEKPLI--LNDEEMEELGEDDEVEHEQEHEDEDGEGDED 732


>Z99278-4|CAB16492.1|  871|Caenorhabditis elegans Hypothetical
           protein Y53C12B.3b protein.
          Length = 871

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
 Frame = +3

Query: 303 YENANQETGEKDSNAN---NNKETSEPLQQPIGETVNVETGESFEVKHQQNCQTTTNETD 473
           Y N N++ G   +N+N   NN   +         T NV +  SFE  + +    TT  T 
Sbjct: 21  YNNNNKKNGGSAANSNQNNNNPHHTSTTDSVPNSTANVSSAISFE--YSEPPGNTTRTTP 78

Query: 474 DDKLAEEISK 503
           D  L  +  K
Sbjct: 79  DSGLGTDDQK 88


>Z99278-3|CAB16493.1|  867|Caenorhabditis elegans Hypothetical
           protein Y53C12B.3a protein.
          Length = 867

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
 Frame = +3

Query: 303 YENANQETGEKDSNAN---NNKETSEPLQQPIGETVNVETGESFEVKHQQNCQTTTNETD 473
           Y N N++ G   +N+N   NN   +         T NV +  SFE  + +    TT  T 
Sbjct: 21  YNNNNKKNGGSAANSNQNNNNPHHTSTTDSVPNSTANVSSAISFE--YSEPPGNTTRTTP 78

Query: 474 DDKLAEEISK 503
           D  L  +  K
Sbjct: 79  DSGLGTDDQK 88


>U97593-7|AAB52878.1|  591|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
           isoform b protein.
          Length = 591

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
 Frame = +3

Query: 243 TDYAKSVKVTGLA-GFNLHPNYENANQETGEKDSNANNNKETSEPLQ--QPIGETVNVET 413
           + Y    +VTG   G  +  NY N N  +   +S ++ ++  S P+Q  Q     ++V T
Sbjct: 130 SSYTTETRVTGGGTGAPVSNNYSNQNYSSSAYNSQSSQHQTKSIPVQNYQISFPPLSVST 189

Query: 414 ---GESFEVKHQQNCQTTTNETDDDKLAEEISKQIMI 515
              G SF    Q++ Q ++ +   D LA  +S+ I +
Sbjct: 190 PAFGTSFFENSQKSFQESSEKFHRD-LASPLSRTIPV 225


>U97593-5|AAB52880.1| 1175|Caenorhabditis elegans
            Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
            isoform a protein.
          Length = 1175

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
 Frame = +3

Query: 243  TDYAKSVKVTGLA-GFNLHPNYENANQETGEKDSNANNNKETSEPLQ--QPIGETVNVET 413
            + Y    +VTG   G  +  NY N N  +   +S ++ ++  S P+Q  Q     ++V T
Sbjct: 714  SSYTTETRVTGGGTGAPVSNNYSNQNYSSSAYNSQSSQHQTKSIPVQNYQISFPPLSVST 773

Query: 414  ---GESFEVKHQQNCQTTTNETDDDKLAEEISKQIMI 515
               G SF    Q++ Q ++ +   D LA  +S+ I +
Sbjct: 774  PAFGTSFFENSQKSFQESSEKFHRD-LASPLSRTIPV 809


>Z66522-7|CAA91409.2|  472|Caenorhabditis elegans Hypothetical
           protein F14E5.1 protein.
          Length = 472

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -1

Query: 412 VSTFTVSPIGCCKGSLVSLLLFALESF 332
           +STFTV P+    GS   L+L+++ SF
Sbjct: 418 ISTFTVLPLYSVIGSYAFLILYSIPSF 444


>Z66520-13|CAA91392.2|  472|Caenorhabditis elegans Hypothetical
           protein F14E5.1 protein.
          Length = 472

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -1

Query: 412 VSTFTVSPIGCCKGSLVSLLLFALESF 332
           +STFTV P+    GS   L+L+++ SF
Sbjct: 418 ISTFTVLPLYSVIGSYAFLILYSIPSF 444


>Z50872-3|CAA90756.1|  238|Caenorhabditis elegans Hypothetical
           protein C05D12.5 protein.
          Length = 238

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 9/74 (12%)
 Frame = +3

Query: 291 LHPNYENANQETGEKDSNANNNKETSEPLQQPIGETVN--VETGES-----FEVKHQQ-N 446
           L  NYE   +E+G + + + + +   + L+  +  ++N  +ET ES       + H + +
Sbjct: 114 LEENYEERLKESGNESTASFDKESRDDSLEDFVEVSINEILETAESKRKLKERINHMETH 173

Query: 447 CQTTTNET-DDDKL 485
           C T   ET +D+KL
Sbjct: 174 CMTMLKETMEDNKL 187


>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
           protein F21E9.1 protein.
          Length = 1170

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -1

Query: 430 TSNDSPVSTFTVSPIGCCKGSLVSLLLFALESFSPVS 320
           +S  SP+S F +    CC  S  + L+  LES+ P+S
Sbjct: 429 SSASSPLSIFLIYRPPCCSVSENAALIAHLESYIPLS 465


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,545,484
Number of Sequences: 27780
Number of extensions: 254074
Number of successful extensions: 966
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 960
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -