Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10839
(688 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g41190.1 68418.m05006 expressed protein ; expression support... 62 3e-10
At2g22795.1 68415.m02704 expressed protein 31 0.54
At1g34540.1 68414.m04292 cytochrome P450 family protein similar ... 31 0.95
At1g66670.1 68414.m07577 ATP-dependent Clp protease proteolytic ... 30 1.3
At5g46280.1 68418.m05697 DNA replication licensing factor, putat... 30 1.7
At1g10930.1 68414.m01255 DNA helicase (RECQl4A) nearly identical... 29 2.2
At4g35310.1 68417.m05019 calcium-dependent protein kinase, putat... 29 2.9
At4g37820.1 68417.m05351 expressed protein Kaposi's sarcoma-asso... 29 3.8
At4g15715.1 68417.m02392 hypothetical protein 29 3.8
At5g60760.1 68418.m07623 2-phosphoglycerate kinase-related conta... 28 5.0
At5g08230.1 68418.m00965 PWWP domain-containing protein putative... 28 5.0
At3g51070.1 68416.m05592 dehydration-responsive protein-related ... 28 5.0
At2g40620.1 68415.m05010 bZIP transcription factor family protei... 28 5.0
At2g34300.1 68415.m04196 dehydration-responsive protein-related ... 28 5.0
At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family pro... 28 5.0
At1g14330.1 68414.m01698 kelch repeat-containing F-box family pr... 28 5.0
At5g24290.2 68418.m02858 integral membrane family protein contai... 28 6.7
At5g24290.1 68418.m02857 integral membrane family protein contai... 28 6.7
At5g44800.1 68418.m05492 chromodomain-helicase-DNA-binding famil... 27 8.8
At5g44690.1 68418.m05476 hypothetical protein 27 8.8
>At5g41190.1 68418.m05006 expressed protein ; expression supported
by MPSS
Length = 602
Score = 62.1 bits (144), Expect = 3e-10
Identities = 28/80 (35%), Positives = 52/80 (65%)
Frame = +1
Query: 7 TIQEVIDEITNDRQRKKLVVLPYDLKVKDVFADNIKFITEFSKKTGDYSSLSATDIKVMA 186
T+ EV+ EI + R++L +P+ + + +++ + +F++ TGD SLS D+K++A
Sbjct: 70 TVPEVLSEIRDPASRRRLAFIPFTIDTMEPSPESLSKVIKFARATGDLQSLSDVDLKLIA 129
Query: 187 LTYQLEKEKVGGTEHLKDEP 246
L+Y LE + V GT++L+D P
Sbjct: 130 LSYTLEAQ-VYGTKNLRDVP 148
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 31.5 bits (68), Expect = 0.54
Identities = 17/68 (25%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +3
Query: 306 ENANQE-TGEKDSNANNNKETSEPLQQPIGETVNVETGESFEVKHQQNCQTTTNETDDDK 482
E+++QE T EK++ +N+E+S + E +E E+ + + +T T E ++
Sbjct: 513 ESSSQEKTEEKETETKDNEESSSQEETKDKENEKIEKEEASSQEESKENETETKEKEESS 572
Query: 483 LAEEISKQ 506
EE ++
Sbjct: 573 SQEETKEK 580
>At1g34540.1 68414.m04292 cytochrome P450 family protein similar to
Cytochrome P450 94A1 (P450-dependent fatty acid
omega-hydroxylase) (SP:O81117) {Vicia sativa}; contains
Pfam profile: PF00067 cytochrome P450
Length = 498
Score = 30.7 bits (66), Expect = 0.95
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = -3
Query: 344 IRVFLTCFLIGIFIIGMKVKPSQSCNFNRFCIVGS 240
I +FL CF I IF I K S F + IVGS
Sbjct: 5 IFIFLLCFPISIFFIFFTKKSSSEFGFKSYPIVGS 39
>At1g66670.1 68414.m07577 ATP-dependent Clp protease proteolytic
subunit (ClpP3) identical to ATP-dependent Clp protease
(nClpP3) GI:5360591 [Arabidopsis thaliana]
Length = 309
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -3
Query: 257 FCIVGSSLRCSVPPTFSFSS-W*VSAITLISVAERLE*SPVFFENSVMNFML 105
FC V SS+ S PP + SS W VS+ ++ SVA+ P F E N +L
Sbjct: 41 FC-VRSSMSLSKPPRQTLSSNWDVSSFSIDSVAQSPSRLPSFEELDTTNMLL 91
>At5g46280.1 68418.m05697 DNA replication licensing factor, putative
similar to SP|Q43704 DNA replication licensing factor
MCM3 homolog (Replication origin activator) (ROA
protein) {Zea mays}; contains Pfam profile PF00493:
MCM2/3/5 family
Length = 776
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/74 (27%), Positives = 32/74 (43%)
Frame = +3
Query: 270 TGLAGFNLHPNYENANQETGEKDSNANNNKETSEPLQQPIGETVNVETGESFEVKHQQNC 449
+G G N + A +T DS + E EP + TV+ E+FE Q+
Sbjct: 662 SGRRGNQRRNNEDGAENDTANVDSETADPMEVDEPSVEQFSGTVSAARIETFERVFGQHM 721
Query: 450 QTTTNETDDDKLAE 491
+ T+ DD +A+
Sbjct: 722 R--THRLDDISIAD 733
>At1g10930.1 68414.m01255 DNA helicase (RECQl4A) nearly identical to
DNA Helicase [Arabidopsis thaliana] GI:11121449
Length = 1188
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +3
Query: 324 TGEKDSNANNNKETSEPLQQPIGETVNVETGESFEVKHQQNCQTTTNETDDDKLAEE 494
T +KDS +N+ S ++ + NV + FEV Q+C+ T ++ L E
Sbjct: 1100 TNKKDSIISNDSPDSGKRRRDENISPNVAEDDDFEVSPSQSCKKTVRNKSNEVLHGE 1156
>At4g35310.1 68417.m05019 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calmodulin-domain protein
kinase CDPK isoform 6 [Arabidopsis thaliana]
gi|1399275|gb|AAB03246; contains protein kinase domain,
Pfam:PF00069; contains EF hand domain (calcium-binding
EF-hand), Pfam:PF00036, INTERPRO:IPR002048
Length = 556
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Frame = +3
Query: 225 GTSQR*TDYAKSVKVTGLAGFNLH-PNYENANQETGEKDSNANNNKETSE---PLQQPI 389
G + + DY+K+ T L+ + H PN + + KD+N+NNN + PL++PI
Sbjct: 16 GDNNKPEDYSKT-STTNLSSNSDHSPNAADIIAQEFSKDNNSNNNSKDPALVIPLREPI 73
>At4g37820.1 68417.m05351 expressed protein Kaposi's
sarcoma-associated herpes-like virus ORF73gene, Kaposi's
sarcoma-associated herpesvirus, U52064
Length = 532
Score = 28.7 bits (61), Expect = 3.8
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Frame = +3
Query: 309 NANQETGEKDSNANNNKET-SEPLQQPIGET--VNVETGE---SFEVKHQQNCQTTTNET 470
N N+ET +K S + + T SE + + T N + G+ + E K + T+ ET
Sbjct: 405 NENKETEKKSSESQRKENTNSEKKIEQVESTDSSNTQKGDEQKTDESKRESGNDTSNKET 464
Query: 471 DDDKLAEEISKQ 506
+DD E K+
Sbjct: 465 EDDSSKTESEKK 476
>At4g15715.1 68417.m02392 hypothetical protein
Length = 118
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +3
Query: 261 VKVTGLAGFNLHPNYENANQETGEKDSNANNNKETSEPLQQPIGETVNVETGESFE 428
++VT L G N+ N+ N + G + NN E + L + + N ETG E
Sbjct: 4 LRVTMLIGVNVDYNFPAVNFDWGNDFDDQMNNNELMKLLIETAIDEENEETGTRLE 59
>At5g60760.1 68418.m07623 2-phosphoglycerate kinase-related contains
weak similarity to 2-phosphoglycerate kinase (GI:467751)
[Methanothermus fervidus]
Length = 738
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/69 (26%), Positives = 28/69 (40%)
Frame = +3
Query: 273 GLAGFNLHPNYENANQETGEKDSNANNNKETSEPLQQPIGETVNVETGESFEVKHQQNCQ 452
GL G + P+ + A G D + ETS + + G S E+K Q+
Sbjct: 530 GLFGISAWPS-DGATSRAGSVDDCKADMAETSSRYYSSCCSSPRMSEGTSKELKEDQSVH 588
Query: 453 TTTNETDDD 479
+ E +DD
Sbjct: 589 GSDEEVEDD 597
>At5g08230.1 68418.m00965 PWWP domain-containing protein putative
transcription factor (HUA2) - Arabidopsis thaliana,
EMBL:AF116556
Length = 1445
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 300 NYENANQETGEKDSNANNNKETSEPLQQPI 389
N N + GE+DS+ +NN+ TS P +P+
Sbjct: 162 NGAEINPDVGEQDSSISNNRNTS-PSSEPV 190
>At3g51070.1 68416.m05592 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 895
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/66 (25%), Positives = 35/66 (53%)
Frame = +3
Query: 297 PNYENANQETGEKDSNANNNKETSEPLQQPIGETVNVETGESFEVKHQQNCQTTTNETDD 476
P+ E N++ E+DSN + + +QP+ ET ET E+ K+++N Q + +
Sbjct: 194 PDVEQGNKQGQEQDSNTDVTFTDATKQEQPM-ETGQGETSET--SKNEENGQPEEQNSGN 250
Query: 477 DKLAEE 494
++ ++
Sbjct: 251 EETGQQ 256
>At2g40620.1 68415.m05010 bZIP transcription factor family protein
identical to b-Zip DNA binding protein GI:2246376 from
[Arabidopsis thaliana]; contains a bZIP transcription
factor basic domain signature (PDOC00036)
Length = 367
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/79 (22%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +1
Query: 37 NDRQRKKLVVLPYDLKVKDVFADNIKFITEFSK-KTGDYSSLSATDIKVMALTYQLEKEK 213
N + +L V+ K++D + +K E K TG+ S A ++ + + YQ + ++
Sbjct: 208 NTELKLRLQVMEQQAKLRDALNEQLKKEVERLKFATGEVSPADAYNLGMAHMQYQQQPQQ 267
Query: 214 VGGTEHLKDEPTMQNLLKL 270
H + + QNL ++
Sbjct: 268 SFFQHHHQQQTDAQNLQQM 286
>At2g34300.1 68415.m04196 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 770
Score = 28.3 bits (60), Expect = 5.0
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Frame = +3
Query: 243 TDYAKSVKVTGLAGFNLHPNYENANQETGEKDSNAN-NNKETSEPLQQPIGETVNVETGE 419
TD AK V L + +N + E E++ A NN+ ++ G VN +GE
Sbjct: 53 TDTAKDVSKNDLRKEEGDRDPKNFSDEKNEENEAATENNQVKTDSENSAEGNQVNESSGE 112
Query: 420 SFEVKHQQNCQTTTNETDDDKLAEEISKQI 509
E ++ ++ N D D E+ K++
Sbjct: 113 KTEAGEERK-ESDDNNGDGDGEKEKNVKEV 141
>At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family
protein similar to ubiquitin-conjugating enzyme
GB:3319990 from [Mus musculus]; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1163
Score = 28.3 bits (60), Expect = 5.0
Identities = 21/93 (22%), Positives = 37/93 (39%), Gaps = 2/93 (2%)
Frame = +3
Query: 297 PNYENANQETGEKDSNANNNKETS--EPLQQPIGETVNVETGESFEVKHQQNCQTTTNET 470
P NAN E K ++ +S EP I ++ NV + ++ + T + +
Sbjct: 520 PPMSNANTENQSKKKTRKRSRSSSQKEPDMVEIKDSSNVRKLKEEFLRDFKRFDTVEDFS 579
Query: 471 DDDKLAEEISKQIMIWI*KMTKLMS*WLKSVMK 569
D AE ++ +W K W+K + K
Sbjct: 580 DHHYAAEGSPAKLSLWHLKFKGRPKNWVKDIQK 612
>At1g14330.1 68414.m01698 kelch repeat-containing F-box family
protein contains Pfam profile PF01344: Kelch motif;
contains weak Pfam PF00646: F-box domain; weak
similarity to Kelch-like protein 1 (Swiss-Prot:Q9NR64)
[Homo sapiens]
Length = 441
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = +3
Query: 246 DYAKSVKVTGLAGFNLHPN--YENANQETGEKDSNANNNKE 362
D + K L GF++H N E QE + DSN N N +
Sbjct: 50 DELRQSKSPRLMGFSIHGNEAIEEDEQEQDQSDSNNNGNSD 90
>At5g24290.2 68418.m02858 integral membrane family protein contains
Pfam domain PF01988: Integral membrane protein
Length = 534
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 309 NANQETGEKDSNANNNKETSEPLQQPIGETVNVETGESFEV-KHQQNCQTTTNETDDDKL 485
N ETG + N NN E+S P E GE E+ + ++N + + +++++
Sbjct: 91 NEESETGSNEENGNNWLESSS-TNLPNVENKRQRNGEDCEIEEEEENNERSLSDSEEKSN 149
Query: 486 AEEI 497
E++
Sbjct: 150 LEKL 153
>At5g24290.1 68418.m02857 integral membrane family protein contains
Pfam domain PF01988: Integral membrane protein
Length = 550
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 309 NANQETGEKDSNANNNKETSEPLQQPIGETVNVETGESFEV-KHQQNCQTTTNETDDDKL 485
N ETG + N NN E+S P E GE E+ + ++N + + +++++
Sbjct: 107 NEESETGSNEENGNNWLESSS-TNLPNVENKRQRNGEDCEIEEEEENNERSLSDSEEKSN 165
Query: 486 AEEI 497
E++
Sbjct: 166 LEKL 169
>At5g44800.1 68418.m05492 chromodomain-helicase-DNA-binding family
protein / CHD family protein similar to chromatin
remodeling factor CHD3 (PICKLE) [Arabidopsis thaliana]
GI:6478518; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain, PF00628: PHD-finger, PF00385:
'chromo' (CHRromatin Organization MOdifier)
Length = 2228
Score = 27.5 bits (58), Expect = 8.8
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 4/39 (10%)
Frame = +3
Query: 306 ENANQETGEKDSNANNNKETSEPL----QQPIGETVNVE 410
E A+QETGEK + A ++E EP+ IGETV+ E
Sbjct: 502 EEAHQETGEKSTVA--DEEIEEPVAAKTSDLIGETVSYE 538
>At5g44690.1 68418.m05476 hypothetical protein
Length = 684
Score = 27.5 bits (58), Expect = 8.8
Identities = 24/101 (23%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
Frame = +3
Query: 264 KVTGLAGFNLHPNYENANQ---ETGEKDSNANNNKETSEPLQQPIGETVNVETGESFEVK 434
+VT + + + E A Q E+G+++ ++ N++ETS+ +Q ET+ + +
Sbjct: 393 EVTSVVCLDREKDEETARQVFRESGKEEKSSQNDEETSKAEKQQAAETLFLILESPIFLN 452
Query: 435 HQQNCQTTTNETDDDKLAEEISKQIMI--WI*KMTKLMS*W 551
NET++++ E+ +++IM WI +++ S W
Sbjct: 453 AWDE-----NETENEE-NEDCNREIMYYDWISDISRPRSYW 487
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,658,729
Number of Sequences: 28952
Number of extensions: 232269
Number of successful extensions: 981
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 978
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1457719448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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