Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10829
         (744 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q23A27 Cluster: Putative uncharacterized protein; n=1; ...    37   0.46 
UniRef50_UPI0000DB7B13 Cluster: PREDICTED: similar to CG5065-PA;...    36   1.4  
UniRef50_A2QPV0 Cluster: Contig An08c0020, complete genome; n=8;...    34   4.2  
UniRef50_A5USW3 Cluster: AAA-4 family protein; n=5; Chloroflexi ...    33   7.4  

>UniRef50_Q23A27 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 919

 Score = 37.1 bits (82), Expect = 0.46
 Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
 Frame = +1

Query: 424 NANVNH-LYRSFKLLSYIIKDNIRFSLSLFNSHIYVSRKQNIYTKQIAFTVISD 582
           N N+N+  + S + +S +I  N+  S S+F+S  Y+   Q IY KQ++F  I++
Sbjct: 95  NVNINNQTFFSLENVSNLIIKNLNVSNSIFSSLFYIIESQQIYFKQLSFQNITN 148


>UniRef50_UPI0000DB7B13 Cluster: PREDICTED: similar to CG5065-PA;
           n=1; Apis mellifera|Rep: PREDICTED: similar to CG5065-PA
           - Apis mellifera
          Length = 1107

 Score = 35.5 bits (78), Expect = 1.4
 Identities = 25/89 (28%), Positives = 50/89 (56%), Gaps = 7/89 (7%)
 Frame = +1

Query: 424 NANVNHLYRSFKLLS--YIIKDNIRFSLSL---FNSHIYVSRKQNIYTKQIAFTVISDSR 588
           N N+N  +++    +  Y++K+++     +   FNS I++SRKQNI +  I F +++D +
Sbjct: 443 NFNINEYFKNCMTGAKCYLLKEDLNRLKEVKQHFNSAIFISRKQNIMSHLIDFHLLNDMK 502

Query: 589 -AVT*L*NVR-RTVK*IHFKLLNQILMYT 669
             +T + N+        HF ++N I ++T
Sbjct: 503 NIITKVENLHLNNRNNQHFHVINHIKIHT 531


>UniRef50_A2QPV0 Cluster: Contig An08c0020, complete genome; n=8;
           Pezizomycotina|Rep: Contig An08c0020, complete genome -
           Aspergillus niger
          Length = 213

 Score = 33.9 bits (74), Expect = 4.2
 Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = -1

Query: 603 KLRNRT*IANYSECDL-FCVDILLAAHVYMRIKEGQTKSNV 484
           K  N   I +  E D+ F VD L +AHVY+R++EG+T  N+
Sbjct: 22  KFENEDLIKHGLEKDVWFHVDNLSSAHVYLRLREGETWDNI 62


>UniRef50_A5USW3 Cluster: AAA-4 family protein; n=5; Chloroflexi
           (class)|Rep: AAA-4 family protein - Roseiflexus sp. RS-1
          Length = 774

 Score = 33.1 bits (72), Expect = 7.4
 Identities = 18/46 (39%), Positives = 26/46 (56%)
 Frame = +1

Query: 445 YRSFKLLSYIIKDNIRFSLSLFNSHIYVSRKQNIYTKQIAFTVISD 582
           Y  F+L++Y  +D +R  +    S  YV R   IYT+Q   TVI+D
Sbjct: 376 YLIFELIAYEGRDLLRVEVRATESPPYVGRNGVIYTRQEGKTVIAD 421


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 530,513,413
Number of Sequences: 1657284
Number of extensions: 9522410
Number of successful extensions: 15840
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15834
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60911752460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)