Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10829
         (744 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146741-1|AAO12101.1|  131|Anopheles gambiae odorant-binding pr...    25   2.5  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    25   3.3  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    25   3.3  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    23   10.0 
AJ439060-6|CAD27757.1|  297|Anopheles gambiae hypothetical prote...    23   10.0 

>AY146741-1|AAO12101.1|  131|Anopheles gambiae odorant-binding
          protein AgamOBP10 protein.
          Length = 131

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +3

Query: 39 IHFLRIHSHINTNLH**ISL 98
          +H L IHSH+  +LH  +SL
Sbjct: 28 VHTLTIHSHMTVSLHCSLSL 47


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 8/24 (33%), Positives = 17/24 (70%)
 Frame = -3

Query: 364 AFYNVSLCFIVKCSIYDITSMYLK 293
           A++ ++   +  CSIY I+++Y+K
Sbjct: 62  AYFFLTFLVVTACSIYFISNVYIK 85


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 8/24 (33%), Positives = 17/24 (70%)
 Frame = -3

Query: 364 AFYNVSLCFIVKCSIYDITSMYLK 293
           A++ ++   +  CSIY I+++Y+K
Sbjct: 62  AYFFLTFLVVTACSIYFISNVYIK 85


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 23.0 bits (47), Expect = 10.0
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = +2

Query: 464 YHTLSKITFDLVCPSLILIYT 526
           Y+T++ +T   + P ++LI+T
Sbjct: 303 YYTIALLTTQFIVPLVVLIFT 323


>AJ439060-6|CAD27757.1|  297|Anopheles gambiae hypothetical protein
           protein.
          Length = 297

 Score = 23.0 bits (47), Expect = 10.0
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 405 YIHLIRKRKCKSPLSIIQTSIIHY 476
           + H IRK   K+ LSI+   ++ Y
Sbjct: 15  FFHFIRKHIPKADLSIVDEIVLSY 38


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 597,795
Number of Sequences: 2352
Number of extensions: 10825
Number of successful extensions: 19
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76507752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)