Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10826X
(338 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P31350 Cluster: Ribonucleoside-diphosphate reductase su... 121 3e-27
UniRef50_P36603 Cluster: Ribonucleoside-diphosphate reductase sm... 106 8e-23
UniRef50_Q5K9L8 Cluster: Ribonucleotide reductase small subunit,... 97 5e-20
UniRef50_P20560 Cluster: Uncharacterized 8.3 kDa protein; n=3; O... 93 1e-18
UniRef50_Q8TGJ8 Cluster: Uncharacterized protein YJL026C-A; n=2;... 78 3e-14
UniRef50_Q5IJA4 Cluster: RR2 protein; n=4; Shrimp white spot syn... 77 6e-14
UniRef50_Q8QNF1 Cluster: EsV-1-128; n=2; Phaeovirus|Rep: EsV-1-1... 73 2e-12
UniRef50_A0EZ20 Cluster: Ribonucleotide reductase small subunit;... 69 2e-11
UniRef50_P49723 Cluster: Ribonucleoside-diphosphate reductase sm... 69 2e-11
UniRef50_P42492 Cluster: Ribonucleoside-diphosphate reductase sm... 67 6e-11
UniRef50_Q7T6Y9 Cluster: Ribonucleoside-diphosphate reductase sm... 64 6e-10
UniRef50_A7R4N6 Cluster: Chromosome undetermined scaffold_747, w... 63 1e-09
UniRef50_A7TFJ9 Cluster: Putative uncharacterized protein; n=1; ... 58 5e-08
UniRef50_Q8VB15 Cluster: Wsv190; n=1; Shrimp white spot syndrome... 50 8e-06
UniRef50_A7IV34 Cluster: Putative uncharacterized protein m654R;... 50 1e-05
UniRef50_Q54E77 Cluster: Putative uncharacterized protein; n=1; ... 48 3e-05
UniRef50_A7TLQ4 Cluster: Putative uncharacterized protein; n=1; ... 44 5e-04
UniRef50_Q0DD39 Cluster: Os06g0257500 protein; n=1; Oryza sativa... 42 0.002
UniRef50_Q4TH71 Cluster: Chromosome undetermined SCAF3173, whole... 40 0.014
UniRef50_Q01038 Cluster: Ribonucleoside-diphosphate reductase sm... 39 0.019
UniRef50_P06474 Cluster: Ribonucleoside-diphosphate reductase sm... 37 0.10
UniRef50_Q4TC55 Cluster: Chromosome undetermined SCAF7053, whole... 34 0.72
UniRef50_Q9K3C2 Cluster: Ribonucleotide-diphosphate reductase sm... 33 1.3
UniRef50_A1A6K4 Cluster: At5g40942; n=1; Arabidopsis thaliana|Re... 33 1.3
UniRef50_Q8I265 Cluster: Serine/threonine protein kinase, putati... 33 1.3
UniRef50_Q01LS0 Cluster: OSIGBa0139J17.4 protein; n=12; Oryza sa... 33 1.7
UniRef50_Q6BBQ6 Cluster: Ribonucleotide reductase small subunit;... 33 1.7
UniRef50_Q7XTR1 Cluster: OSJNBb0085C12.10 protein; n=3; Oryza sa... 32 2.9
UniRef50_Q7XSI0 Cluster: OSJNBa0073L13.8 protein; n=1; Oryza sat... 32 2.9
UniRef50_Q01MA0 Cluster: OSIGBa0145B03.3 protein; n=2; Oryza sat... 32 2.9
UniRef50_A5B5F6 Cluster: Putative uncharacterized protein; n=1; ... 32 2.9
UniRef50_P05444 Cluster: ClpA homolog protein; n=335; Bacteria|R... 31 3.8
UniRef50_Q1DC82 Cluster: ClpA/B family protein; n=2; Cystobacter... 31 6.7
UniRef50_Q9H7M0 Cluster: FLJ00050 protein; n=3; Homo sapiens|Rep... 31 6.7
UniRef50_A5DVJ2 Cluster: Phospholipid:diacylglycerol acyltransfe... 31 6.7
UniRef50_Q5V1C6 Cluster: Putative uncharacterized protein; n=1; ... 31 6.7
UniRef50_UPI0000E248F9 Cluster: PREDICTED: similar to FLJ00050 p... 30 8.8
UniRef50_UPI0000498A3B Cluster: helicase; n=1; Entamoeba histoly... 30 8.8
UniRef50_A3JJK0 Cluster: Putative uncharacterized protein; n=1; ... 30 8.8
UniRef50_Q17K28 Cluster: Putative uncharacterized protein; n=1; ... 30 8.8
UniRef50_Q8W4N3 Cluster: Ubiquitin carboxyl-terminal hydrolase 2... 30 8.8
>UniRef50_P31350 Cluster: Ribonucleoside-diphosphate reductase
subunit M2; n=260; root|Rep: Ribonucleoside-diphosphate
reductase subunit M2 - Homo sapiens (Human)
Length = 389
Score = 121 bits (292), Expect = 3e-27
Identities = 57/84 (67%), Positives = 63/84 (75%)
Frame = +3
Query: 3 KADWALQWIASKTATFGERIVAFAAVEXXXXXXXXXXXXWLKKRGLMPGLTFSNGLISRD 182
KADWAL+WI K AT+GER+VAFAAVE WLKKRGLMPGLTFSN LISRD
Sbjct: 206 KADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRD 265
Query: 183 EGLHTDFACLMFQHLGQKATKECV 254
EGLH DFACLMF+HL K ++E V
Sbjct: 266 EGLHCDFACLMFKHLVHKPSEERV 289
Score = 44.0 bits (99), Expect = 7e-04
Identities = 19/26 (73%), Positives = 24/26 (92%)
Frame = +2
Query: 260 IVKDAVVIEQEFLTDALPVRLLGMNC 337
I+ +AV IEQEFLT+ALPV+L+GMNC
Sbjct: 292 IIINAVRIEQEFLTEALPVKLIGMNC 317
>UniRef50_P36603 Cluster: Ribonucleoside-diphosphate reductase small
chain; n=12; Eukaryota|Rep: Ribonucleoside-diphosphate
reductase small chain - Schizosaccharomyces pombe
(Fission yeast)
Length = 391
Score = 106 bits (255), Expect = 8e-23
Identities = 50/84 (59%), Positives = 58/84 (69%)
Frame = +3
Query: 3 KADWALQWIASKTATFGERIVAFAAVEXXXXXXXXXXXXWLKKRGLMPGLTFSNGLISRD 182
KA WAL+WI + +T+ R+VAFAAVE WLKKRGLMPGLTFSN LI RD
Sbjct: 203 KAKWALRWINDEDSTYAIRLVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELICRD 262
Query: 183 EGLHTDFACLMFQHLGQKATKECV 254
EGLHTDFACLMF HL + ++ V
Sbjct: 263 EGLHTDFACLMFSHLKHRPGRKVV 286
Score = 37.9 bits (84), Expect = 0.044
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +2
Query: 260 IVKDAVVIEQEFLTDALPVRLLGMN 334
I+ +AV IE+E+ TDALPV LLGMN
Sbjct: 289 IIVEAVDIEKEYFTDALPVSLLGMN 313
>UniRef50_Q5K9L8 Cluster: Ribonucleotide reductase small subunit,
putative; n=1; Filobasidiella neoformans|Rep:
Ribonucleotide reductase small subunit, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 430
Score = 97.5 bits (232), Expect = 5e-20
Identities = 46/82 (56%), Positives = 56/82 (68%)
Frame = +3
Query: 3 KADWALQWIASKTATFGERIVAFAAVEXXXXXXXXXXXXWLKKRGLMPGLTFSNGLISRD 182
KADWAL++I + F R+VAFA VE WLKKRGLMPGLTFSN LISRD
Sbjct: 237 KADWALKYITDELP-FRTRLVAFACVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRD 295
Query: 183 EGLHTDFACLMFQHLGQKATKE 248
EG+HTDFACL++ HL + + +
Sbjct: 296 EGMHTDFACLLYNHLKHRCSTD 317
Score = 41.1 bits (92), Expect = 0.005
Identities = 17/26 (65%), Positives = 23/26 (88%)
Frame = +2
Query: 257 HIVKDAVVIEQEFLTDALPVRLLGMN 334
HIV +A+VIE++FLTDALP L+G+N
Sbjct: 321 HIVSEALVIEKQFLTDALPCALIGIN 346
>UniRef50_P20560 Cluster: Uncharacterized 8.3 kDa protein; n=3;
Orthopoxvirus|Rep: Uncharacterized 8.3 kDa protein -
Vaccinia virus (strain Copenhagen) (VACV)
Length = 78
Score = 93.1 bits (221), Expect = 1e-18
Identities = 47/59 (79%), Positives = 48/59 (81%)
Frame = -2
Query: 226 KCWNIRQAKSVCRPSSLEISPLLNVSPGIRPRFLSQKMEAKLPEKKIPSTAAKATILSP 50
KC NI+ AKS CRPSSL IS L NVSPGIRPRFLSQ MEA PEKKIPSTAAKA LSP
Sbjct: 20 KCLNIKHAKSQCRPSSLLISSLENVSPGIRPRFLSQNMEANDPEKKIPSTAAKAISLSP 78
>UniRef50_Q8TGJ8 Cluster: Uncharacterized protein YJL026C-A; n=2;
Saccharomycetaceae|Rep: Uncharacterized protein
YJL026C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 73
Score = 78.2 bits (184), Expect = 3e-14
Identities = 39/59 (66%), Positives = 44/59 (74%)
Frame = -2
Query: 217 NIRQAKSVCRPSSLEISPLLNVSPGIRPRFLSQKMEAKLPEKKIPSTAAKATILSPNVA 41
N + AKSVC+PSSL+I+ L V PGI P F +QKMEAK PEKK PS AKAT LSPN A
Sbjct: 12 NNKHAKSVCKPSSLQINSLEKVKPGIIPLFFNQKMEAKEPEKKTPSMEAKATSLSPNKA 70
>UniRef50_Q5IJA4 Cluster: RR2 protein; n=4; Shrimp white spot
syndrome virus|Rep: RR2 protein - White spot syndrome
virus (WSSV)
Length = 328
Score = 77.4 bits (182), Expect = 6e-14
Identities = 36/73 (49%), Positives = 44/73 (60%)
Frame = +3
Query: 3 KADWALQWIASKTATFGERIVAFAAVEXXXXXXXXXXXXWLKKRGLMPGLTFSNGLISRD 182
K WA+ W+ S E IVAFAAVE W+K RG++PGLT SN ISRD
Sbjct: 169 KEQWAINWMQSNN-DLAELIVAFAAVEGIFFSGAFASIFWIKNRGILPGLTSSNEFISRD 227
Query: 183 EGLHTDFACLMFQ 221
EGLH DFAC++ +
Sbjct: 228 EGLHRDFACMLLK 240
Score = 43.6 bits (98), Expect = 9e-04
Identities = 20/28 (71%), Positives = 24/28 (85%)
Frame = +2
Query: 254 LHIVKDAVVIEQEFLTDALPVRLLGMNC 337
L IV +AV IEQEFLT +LPV+L+GMNC
Sbjct: 253 LEIVTEAVRIEQEFLTVSLPVKLVGMNC 280
>UniRef50_Q8QNF1 Cluster: EsV-1-128; n=2; Phaeovirus|Rep: EsV-1-128
- Ectocarpus siliculosus virus 1
Length = 419
Score = 72.5 bits (170), Expect = 2e-12
Identities = 34/84 (40%), Positives = 49/84 (58%)
Frame = +3
Query: 3 KADWALQWIASKTATFGERIVAFAAVEXXXXXXXXXXXXWLKKRGLMPGLTFSNGLISRD 182
KA WA +W+ +TA+ ER+V F +E WLKKR GL+F+N LI+RD
Sbjct: 236 KALWAEKWMNPETASLAERLVGFTCLEGVQFSGSFCAIYWLKKRQKFKGLSFANSLIARD 295
Query: 183 EGLHTDFACLMFQHLGQKATKECV 254
EGLH + L+++HL + +E V
Sbjct: 296 EGLHATASVLIYKHLKNRLPRERV 319
>UniRef50_A0EZ20 Cluster: Ribonucleotide reductase small subunit;
n=1; Ecotropis obliqua NPV|Rep: Ribonucleotide reductase
small subunit - Ecotropis obliqua NPV
Length = 341
Score = 68.9 bits (161), Expect = 2e-11
Identities = 32/64 (50%), Positives = 41/64 (64%)
Frame = +3
Query: 33 SKTATFGERIVAFAAVEXXXXXXXXXXXXWLKKRGLMPGLTFSNGLISRDEGLHTDFACL 212
S + R++AFA VE ++K +GLMPGLTFSN LISRDEGLHTDFAC+
Sbjct: 169 SYPSKLARRMIAFAIVEGIFFSGSFAAIFFIKTKGLMPGLTFSNELISRDEGLHTDFACM 228
Query: 213 MFQH 224
+ +
Sbjct: 229 YYNN 232
Score = 30.3 bits (65), Expect = 8.8
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +2
Query: 269 DAVVIEQEFLTDALPVRLLGMN 334
+AV IE+EF T ALP LLG+N
Sbjct: 251 EAVDIEKEFFTTALPCYLLGIN 272
>UniRef50_P49723 Cluster: Ribonucleoside-diphosphate reductase small
chain 2; n=3; Saccharomycetales|Rep:
Ribonucleoside-diphosphate reductase small chain 2 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 345
Score = 68.9 bits (161), Expect = 2e-11
Identities = 32/84 (38%), Positives = 47/84 (55%)
Frame = +3
Query: 3 KADWALQWIASKTATFGERIVAFAAVEXXXXXXXXXXXXWLKKRGLMPGLTFSNGLISRD 182
KA + +WI++ + + ER+VAFAA E WL + +MPGL +N I RD
Sbjct: 160 KAAFIERWISNDDSLYAERLVAFAAKEGIFQAGNYASMFWLTDKKIMPGLAMANRNICRD 219
Query: 183 EGLHTDFACLMFQHLGQKATKECV 254
G +TDF+CL+F HL K + +
Sbjct: 220 RGAYTDFSCLLFAHLRTKPNPKII 243
Score = 31.1 bits (67), Expect = 5.1
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +2
Query: 224 LRAKGN*GMCLHIVKDAVVIEQEFLTDALPVRLLGMN 334
LR K N + I+ +AV IE+E+ +++LPV GM+
Sbjct: 234 LRTKPNPKIIEKIITEAVEIEKEYYSNSLPVEKFGMD 270
>UniRef50_P42492 Cluster: Ribonucleoside-diphosphate reductase small
chain; n=2; African swine fever virus|Rep:
Ribonucleoside-diphosphate reductase small chain -
African swine fever virus (strain BA71V) (ASFV)
Length = 334
Score = 67.3 bits (157), Expect = 6e-11
Identities = 31/73 (42%), Positives = 40/73 (54%)
Frame = +3
Query: 6 ADWALQWIASKTATFGERIVAFAAVEXXXXXXXXXXXXWLKKRGLMPGLTFSNGLISRDE 185
A W QW+ T GER+V FAAVE +LK++ +MPGL N ISRDE
Sbjct: 146 AQWVRQWMDPDRNTLGERLVGFAAVEGILFQNHFVAIQFLKEQNIMPGLVSYNEFISRDE 205
Query: 186 GLHTDFACLMFQH 224
G+H FAC + +
Sbjct: 206 GVHCSFACFLISN 218
>UniRef50_Q7T6Y9 Cluster: Ribonucleoside-diphosphate reductase small
chain; n=1; Acanthamoeba polyphaga mimivirus|Rep:
Ribonucleoside-diphosphate reductase small chain -
Mimivirus
Length = 417
Score = 64.1 bits (149), Expect = 6e-10
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 KADWALQWIASKTATFGERIVAFAAVEXXXXXXXXXXXXWLKKRGL--MPGLTFSNGLIS 176
KADW +WI S T+ ++VAF+ VE WLK R + MPGL SN I+
Sbjct: 236 KADWCNKWIKSDK-TYAHKLVAFSIVEGVFFSGSFASIFWLKTREMHVMPGLIISNQFIA 294
Query: 177 RDEGLHTDFACLMFQHLGQKATKECV 254
RDE H + AC+M+ L + + V
Sbjct: 295 RDENKHVELACIMYSLLNNRLKESVV 320
Score = 36.7 bits (81), Expect = 0.10
Identities = 14/25 (56%), Positives = 21/25 (84%)
Frame = +2
Query: 260 IVKDAVVIEQEFLTDALPVRLLGMN 334
I+ +A+ IE+EF+ D+LP +LLGMN
Sbjct: 323 IIDEAIEIEEEFINDSLPCKLLGMN 347
>UniRef50_A7R4N6 Cluster: Chromosome undetermined scaffold_747,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_747, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 82
Score = 62.9 bits (146), Expect = 1e-09
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +3
Query: 126 KKRGLMPGLTFSNGLISRDEGLHTDFACLMFQHL 227
KKRGLMPGLTFSN LISRDEGLH DFACL++ L
Sbjct: 18 KKRGLMPGLTFSNELISRDEGLHCDFACLLYNLL 51
>UniRef50_A7TFJ9 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 351
Score = 57.6 bits (133), Expect = 5e-08
Identities = 29/84 (34%), Positives = 41/84 (48%)
Frame = +3
Query: 3 KADWALQWIASKTATFGERIVAFAAVEXXXXXXXXXXXXWLKKRGLMPGLTFSNGLISRD 182
K ++A W ++ FGE+++A AAV +K GL+PG + RD
Sbjct: 163 KIEYAKSWFENEDNLFGEKLIAEAAVLGIFSLSAYVSVLSFQKGGLIPGFVTGVDNMLRD 222
Query: 183 EGLHTDFACLMFQHLGQKATKECV 254
GLH DF CLM+ HL + E V
Sbjct: 223 RGLHVDFCCLMYAHLKNQIDSEIV 246
>UniRef50_Q8VB15 Cluster: Wsv190; n=1; Shrimp white spot syndrome
virus|Rep: Wsv190 - White spot syndrome virus (WSSV)
Length = 85
Score = 50.4 bits (115), Expect = 8e-06
Identities = 30/57 (52%), Positives = 36/57 (63%)
Frame = -2
Query: 172 ISPLLNVSPGIRPRFLSQKMEAKLPEKKIPSTAAKATILSPNVAVLLAIHCRAQSAF 2
++ L V PG P FL QKM+A P KKIPSTAAKATI S ++LL I A +F
Sbjct: 1 MNSLEEVRPGKIPLFLIQKMDANAPLKKIPSTAAKATISSAK-SLLLCIQLIAHCSF 56
>UniRef50_A7IV34 Cluster: Putative uncharacterized protein m654R;
n=3; Chlorovirus|Rep: Putative uncharacterized protein
m654R - Chlorella virus MT325
Length = 188
Score = 49.6 bits (113), Expect = 1e-05
Identities = 29/61 (47%), Positives = 32/61 (52%)
Frame = -2
Query: 229 PKCWNIRQAKSVCRPSSLEISPLLNVSPGIRPRFLSQKMEAKLPEKKIPSTAAKATILSP 50
P CW CRPSS ++ L PGI PRFLSQK+ K PE PST AT S
Sbjct: 81 PNCW--------CRPSSRLMNSLDRPKPGITPRFLSQKIAQKEPENSRPSTHTHATRRSA 132
Query: 49 N 47
N
Sbjct: 133 N 133
>UniRef50_Q54E77 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 257
Score = 48.4 bits (110), Expect = 3e-05
Identities = 27/58 (46%), Positives = 33/58 (56%)
Frame = +3
Query: 3 KADWALQWIASKTATFGERIVAFAAVEXXXXXXXXXXXXWLKKRGLMPGLTFSNGLIS 176
KA+WAL+WI +F +R+VA A E LKKR LM GLTFSN LI+
Sbjct: 203 KAEWALKWI---NESFEKRLVALVAFESIFFSGSFRIISLLKKRSLMQGLTFSNELIN 257
>UniRef50_A7TLQ4 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 361
Score = 44.4 bits (100), Expect = 5e-04
Identities = 21/78 (26%), Positives = 41/78 (52%)
Frame = +3
Query: 3 KADWALQWIASKTATFGERIVAFAAVEXXXXXXXXXXXXWLKKRGLMPGLTFSNGLISRD 182
K +A +W +++ F E++VAF+++E L+K+ ++PGL LI +D
Sbjct: 176 KKSFAERWFDKESSLFAEKLVAFSSIEAIFSLVSFFSIMSLEKKDIIPGLISGIKLILKD 235
Query: 183 EGLHTDFACLMFQHLGQK 236
+H DF ++ L ++
Sbjct: 236 HIVHCDFQMSIYSELKKR 253
>UniRef50_Q0DD39 Cluster: Os06g0257500 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os06g0257500 protein -
Oryza sativa subsp. japonica (Rice)
Length = 352
Score = 42.3 bits (95), Expect = 0.002
Identities = 19/68 (27%), Positives = 40/68 (58%)
Frame = -1
Query: 212 QTSKICMQTFIPGNKSITECKSRHKAPLFEPEDGSKTA*EKDSFYSCKGNNPFTKCCSLA 33
+ ++ +Q + G++ + E ++RH+ PL EPEDG++ A E+D + +G+ + + A
Sbjct: 99 EAGEVAVQALVAGDELVGEGEARHEPPLLEPEDGAEGAREEDPLDAGEGDEALGEALA-A 157
Query: 32 CNPL*SPI 9
+P P+
Sbjct: 158 VDPAHGPV 165
>UniRef50_Q4TH71 Cluster: Chromosome undetermined SCAF3173, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF3173,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 441
Score = 39.5 bits (88), Expect = 0.014
Identities = 36/92 (39%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Frame = +2
Query: 77 CRR--NLFLRQFCFHLLAQKAGPYAGTYIQ*WTYFQG*RSAYRFCLSDV--PTLRAKGN* 244
CRR NL L C HLLA++A P A + Q SA R LSDV P + G
Sbjct: 341 CRRGGNLLLGLLCRHLLAEEARPDARPDLLQRADQQRRGSALRLRLSDVQAPAAQTVGTD 400
Query: 245 GMCLHIVKDAVVIEQEFLTD-ALPVRLLGMNC 337
G H + ++ + D ALPV+L+GMNC
Sbjct: 401 GRRHHQERRG---DRAGVPDRALPVKLIGMNC 429
>UniRef50_Q01038 Cluster: Ribonucleoside-diphosphate reductase small
chain; n=19; Herpesviridae|Rep:
Ribonucleoside-diphosphate reductase small chain -
Saimiriine herpesvirus 2 (strain 11) (SaHV-2)
(Herpesvirus saimiri)
Length = 305
Score = 39.1 bits (87), Expect = 0.019
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Frame = +3
Query: 18 LQWI---ASKTATFGERIVAFAAVEXXXXXXXXXXXXWLKKRGLMPGLTFSNGLISRDEG 188
L+W+ ++ + E+I+ F VE + RG+M G+ +N I+RDE
Sbjct: 133 LRWLNGRVTEASDKAEKILLFLLVEGIFFISSFFSIGLFRVRGIMNGICLANDYIARDEM 192
Query: 189 LHTDFACLMFQHLGQKATK 245
LHT A L++ + + + +
Sbjct: 193 LHTSAAALLYNTMTKSSER 211
>UniRef50_P06474 Cluster: Ribonucleoside-diphosphate reductase small
chain; n=242; Herpesviridae|Rep:
Ribonucleoside-diphosphate reductase small chain - Human
herpesvirus 1 (strain KOS) (HHV-1) (Human herpes simplex
virus1)
Length = 340
Score = 36.7 bits (81), Expect = 0.10
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +3
Query: 3 KADWALQWIASKTATFGERIVAFAAVEXXXXXXXXXXXXWLKKRGLMPGLTFSNGLISRD 182
K DW L+ + A+ E+ + +E +L+ L+ SN LISRD
Sbjct: 162 KVDW-LEARVRECASVPEKFILMILIEGIFFAASFAAIAYLRTNNLLRVTCQSNDLISRD 220
Query: 183 EGLHTDFACLMF-QHLGQKA 239
E +HT +C ++ +LG A
Sbjct: 221 EAVHTTASCYIYNNYLGGHA 240
>UniRef50_Q4TC55 Cluster: Chromosome undetermined SCAF7053, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF7053,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 369
Score = 33.9 bits (74), Expect = 0.72
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +3
Query: 3 KADWALQWIASKTATFGER 59
KADWAL WI ++ A++GER
Sbjct: 138 KADWALNWIGNQKASYGER 156
>UniRef50_Q9K3C2 Cluster: Ribonucleotide-diphosphate reductase small
chain; n=14; Bacteria|Rep: Ribonucleotide-diphosphate
reductase small chain - Streptomyces coelicolor
Length = 343
Score = 33.1 bits (72), Expect = 1.3
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +3
Query: 60 IVAFAA-VEXXXXXXXXXXXXWLKKRGLMPGLTFSNGLISRDEGLHTDFA 206
++ FAA +E W + RGL+ GL + RDE +H FA
Sbjct: 177 LICFAACIEGLFFYGAFAYVYWFRSRGLLHGLATGTNWVFRDETMHMSFA 226
>UniRef50_A1A6K4 Cluster: At5g40942; n=1; Arabidopsis thaliana|Rep:
At5g40942 - Arabidopsis thaliana (Mouse-ear cress)
Length = 231
Score = 33.1 bits (72), Expect = 1.3
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +2
Query: 224 LRAKGN*GMCLHIVKDAVVIEQEFLTDALPVRLLGMN 334
LR K + IV DAV IE+EF+ DAL L+GMN
Sbjct: 115 LRTKFDEDRLKAIVCDAVEIEREFVCDALSCALVGMN 151
>UniRef50_Q8I265 Cluster: Serine/threonine protein kinase, putative;
n=4; Plasmodium|Rep: Serine/threonine protein kinase,
putative - Plasmodium falciparum (isolate 3D7)
Length = 1534
Score = 33.1 bits (72), Expect = 1.3
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 32 KQDCNIW*KDCCLCSCRRNLFLRQFCFH 115
K N + K+ CL C++ +FL+ +CFH
Sbjct: 992 KYTYNFYKKNICLSGCKKRIFLKIYCFH 1019
>UniRef50_Q01LS0 Cluster: OSIGBa0139J17.4 protein; n=12; Oryza
sativa|Rep: OSIGBa0139J17.4 protein - Oryza sativa
(Rice)
Length = 1515
Score = 32.7 bits (71), Expect = 1.7
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +2
Query: 20 TVDCKQDCNIW*K-DCCLCSCRRNLFLRQFCFHLLAQKA 133
T D +C +W + C C+C + L + C H+LA A
Sbjct: 689 TTDITLECTLWPEYHACKCNCNKTYLLHRPCSHVLAASA 727
>UniRef50_Q6BBQ6 Cluster: Ribonucleotide reductase small subunit;
n=9; Plasmodium|Rep: Ribonucleotide reductase small
subunit - Plasmodium falciparum
Length = 324
Score = 32.7 bits (71), Expect = 1.7
Identities = 21/60 (35%), Positives = 28/60 (46%)
Frame = +3
Query: 120 WLKKRGLMPGLTFSNGLISRDEGLHTDFACLMFQHLGQKATKECVCIL*KMQ*SLSKSFS 299
+ K+ ++P L + I RDE LH DF+ + HL K E V KM L FS
Sbjct: 185 YCKENSILPCLCNVHEKIHRDEYLHGDFSVMCCNHLVNKLKYEHVLDYFKMAVDLEYQFS 244
>UniRef50_Q7XTR1 Cluster: OSJNBb0085C12.10 protein; n=3; Oryza
sativa (japonica cultivar-group)|Rep: OSJNBb0085C12.10
protein - Oryza sativa subsp. japonica (Rice)
Length = 960
Score = 31.9 bits (69), Expect = 2.9
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +2
Query: 20 TVDCKQDCNIW*K-DCCLCSCRRNLFLRQFCFHLLAQKA 133
T D +C +W + C C+C + L + C H+LA A
Sbjct: 445 TTDITLECTLWPEYHACKCNCNKPYLLHRPCSHVLAASA 483
>UniRef50_Q7XSI0 Cluster: OSJNBa0073L13.8 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: OSJNBa0073L13.8 protein -
Oryza sativa subsp. japonica (Rice)
Length = 925
Score = 31.9 bits (69), Expect = 2.9
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +2
Query: 20 TVDCKQDCNIW*K-DCCLCSCRRNLFLRQFCFHLLAQKA 133
T D +C +W + C C+C + L + C H+LA A
Sbjct: 372 TTDITLECTLWPEYHACKCNCNKPYLLHRPCSHVLAASA 410
>UniRef50_Q01MA0 Cluster: OSIGBa0145B03.3 protein; n=2; Oryza
sativa|Rep: OSIGBa0145B03.3 protein - Oryza sativa
(Rice)
Length = 1318
Score = 31.9 bits (69), Expect = 2.9
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +2
Query: 20 TVDCKQDCNIW*K-DCCLCSCRRNLFLRQFCFHLLAQKA 133
T D +C +W + C C+C + L + C H+LA A
Sbjct: 592 TTDITLECTLWPEYHACKCNCNKPYLLHRPCSHVLAASA 630
>UniRef50_A5B5F6 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 172
Score = 31.9 bits (69), Expect = 2.9
Identities = 21/38 (55%), Positives = 24/38 (63%)
Frame = +1
Query: 1 RKQIGLYSGLQARLQHLVKGLLPLQL*KESFSQAVLLP 114
RKQ GLYSG ARLQ V LP+ L K+S A +LP
Sbjct: 90 RKQDGLYSGTDARLQRCVNDGLPM-LGKDS---ATILP 123
>UniRef50_P05444 Cluster: ClpA homolog protein; n=335; Bacteria|Rep:
ClpA homolog protein - Rhodopseudomonas blastica
Length = 793
Score = 31.5 bits (68), Expect = 3.8
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = -2
Query: 169 SPLLNVSPGIRPRFLSQKMEAKLPEKKIPSTAAKATILSPNVAVLLA 29
+PLL PG+ +++ + K+ +K++P + ATI S ++ LLA
Sbjct: 239 NPLLVGDPGVGKTAIAEGLAWKIIKKEVPEVLSGATIFSLDMGALLA 285
>UniRef50_Q1DC82 Cluster: ClpA/B family protein; n=2;
Cystobacterineae|Rep: ClpA/B family protein - Myxococcus
xanthus (strain DK 1622)
Length = 966
Score = 30.7 bits (66), Expect = 6.7
Identities = 16/54 (29%), Positives = 30/54 (55%)
Frame = -2
Query: 166 PLLNVSPGIRPRFLSQKMEAKLPEKKIPSTAAKATILSPNVAVLLAIHCRAQSA 5
PLL PG+ L Q++ ++ E ++ + A A ++ +VA +LA + Q+A
Sbjct: 76 PLLAGEPGVGKSALVQEVARRIAEGRVDAELANARVVEVSVANILARSTQRQAA 129
>UniRef50_Q9H7M0 Cluster: FLJ00050 protein; n=3; Homo sapiens|Rep:
FLJ00050 protein - Homo sapiens (Human)
Length = 270
Score = 30.7 bits (66), Expect = 6.7
Identities = 21/65 (32%), Positives = 31/65 (47%)
Frame = -2
Query: 328 TEQSYRERICEKLLLNDYCIFHNMQTHSLVAFCPKCWNIRQAKSVCRPSSLEISPLLNVS 149
T ++ER+ + L D + N+QT S+ K W++ + R SS VS
Sbjct: 102 TVWEFQERLSQSWALEDNSVLRNLQT-SMKELTKKHWDLPSPGELERGSS-------RVS 153
Query: 148 PGIRP 134
PGIRP
Sbjct: 154 PGIRP 158
>UniRef50_A5DVJ2 Cluster: Phospholipid:diacylglycerol
acyltransferase; n=7; Saccharomycetales|Rep:
Phospholipid:diacylglycerol acyltransferase -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 713
Score = 30.7 bits (66), Expect = 6.7
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = -1
Query: 236 LLP*VLEHQTSKICMQTFIPGNKSITECKSRHKAPLFEPEDGSKTA*EKDSFYSCKGN 63
LL V+ H+ K + PGN +T + +H+ F+ G+KTA D S + N
Sbjct: 625 LLTHVMCHEWQKGSKSRYNPGNVDVTVVEIKHEPDRFDLRGGAKTAEHVDILGSAELN 682
>UniRef50_Q5V1C6 Cluster: Putative uncharacterized protein; n=1;
Haloarcula marismortui|Rep: Putative uncharacterized
protein - Haloarcula marismortui (Halobacterium
marismortui)
Length = 262
Score = 30.7 bits (66), Expect = 6.7
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = -2
Query: 190 RPSSLEISPLLNVSP-GIRPRFLSQKMEAKLPEKKIPSTAAKATILSPNVAVLL 32
RP ++E NV P G+ PRF++ E + +PST A T L+ VA +L
Sbjct: 51 RPVAVEPLTEANVGPDGLIPRFVNAVREGRDCLFVVPSTEAMGTTLTQMVATVL 104
>UniRef50_UPI0000E248F9 Cluster: PREDICTED: similar to FLJ00050
protein; n=1; Pan troglodytes|Rep: PREDICTED: similar to
FLJ00050 protein - Pan troglodytes
Length = 270
Score = 30.3 bits (65), Expect = 8.8
Identities = 21/65 (32%), Positives = 31/65 (47%)
Frame = -2
Query: 328 TEQSYRERICEKLLLNDYCIFHNMQTHSLVAFCPKCWNIRQAKSVCRPSSLEISPLLNVS 149
T ++ER+ + L D + N+QT S+ K W++ + R SS VS
Sbjct: 141 TVWEFQERLSQSWALEDNTVLRNLQT-SMKELTKKHWDLPPPGELERGSS-------RVS 192
Query: 148 PGIRP 134
PGIRP
Sbjct: 193 PGIRP 197
>UniRef50_UPI0000498A3B Cluster: helicase; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: helicase - Entamoeba
histolytica HM-1:IMSS
Length = 1214
Score = 30.3 bits (65), Expect = 8.8
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -1
Query: 236 LLP*VLEHQTSKICMQTFIPGNKSITECKSR 144
L+ ++ ++T+ IC+ F+PG I E KSR
Sbjct: 339 LIQYIIRNETAPICILVFLPGMAEIEEMKSR 369
>UniRef50_A3JJK0 Cluster: Putative uncharacterized protein; n=1;
Marinobacter sp. ELB17|Rep: Putative uncharacterized
protein - Marinobacter sp. ELB17
Length = 302
Score = 30.3 bits (65), Expect = 8.8
Identities = 17/67 (25%), Positives = 26/67 (38%)
Frame = +3
Query: 48 FGERIVAFAAVEXXXXXXXXXXXXWLKKRGLMPGLTFSNGLISRDEGLHTDFACLMFQHL 227
F ++++AFA WL + G+ P L N ++ L DF + L
Sbjct: 175 FADKLLAFAMRPGRIKYRDVWDIGWLAQNGIEPALDLLNAKLADHGELEDDFLIRSDERL 234
Query: 228 GQKATKE 248
GQ E
Sbjct: 235 GQLVNDE 241
>UniRef50_Q17K28 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 390
Score = 30.3 bits (65), Expect = 8.8
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = -2
Query: 337 AVHTEQSYRERICEKLLLNDYCIFHNMQTHSLVA--FCPKCWNIRQAKSV 194
+VH E+ ++ +C +LN Y + +M H+ CP C KSV
Sbjct: 282 SVHDEKKFQCSLCGLKILNKYSLQRHMNIHTQTRDFVCPHCGKAFYCKSV 331
>UniRef50_Q8W4N3 Cluster: Ubiquitin carboxyl-terminal hydrolase 2;
n=1; Arabidopsis thaliana|Rep: Ubiquitin
carboxyl-terminal hydrolase 2 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 961
Score = 30.3 bits (65), Expect = 8.8
Identities = 19/68 (27%), Positives = 36/68 (52%)
Frame = -2
Query: 256 QTHSLVAFCPKCWNIRQAKSVCRPSSLEISPLLNVSPGIRPRFLSQKMEAKLPEKKIPST 77
+T S+V+ C +C + + SL + SP +P+ +S+ +AKLP K++P
Sbjct: 358 ETSSIVS-CMECGHSSKVYEPFLDLSLPVP--FKKSPPKKPQPVSRAKKAKLPPKRVPKN 414
Query: 76 AAKATILS 53
+K + +S
Sbjct: 415 VSKVSKVS 422
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 334,956,263
Number of Sequences: 1657284
Number of extensions: 6218135
Number of successful extensions: 16797
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 16275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16786
length of database: 575,637,011
effective HSP length: 88
effective length of database: 429,796,019
effective search space used: 10315104456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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