Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10823X
(370 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 84 4e-17
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 83 5e-17
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 82 1e-16
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760... 80 5e-16
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 79 1e-15
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 77 3e-15
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593... 74 3e-14
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 55 2e-08
04_04_0127 + 22957203-22957420,22957552-22957675,22957784-22958002 29 1.5
04_04_1588 - 34633057-34633824 28 2.0
12_02_1024 - 25449163-25449824,25451882-25452191 28 2.6
09_02_0151 - 5035572-5035954,5036309-5036324,5036420-5037040 27 3.5
08_02_0201 + 14200684-14201412 27 3.5
04_04_1392 + 33201015-33201600,33202030-33202406,33202528-332026... 27 3.5
07_03_0258 - 15907667-15907909,15909015-15909081,15910218-15910237 27 4.6
03_06_0767 + 36126254-36126264,36126676-36126769,36127068-361273... 27 6.1
11_04_0233 + 15168851-15170263 26 8.1
01_02_0053 + 10673264-10674510,10674552-10674576,10674802-106748... 26 8.1
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 83.8 bits (198), Expect = 4e-17
Identities = 40/48 (83%), Positives = 42/48 (87%)
Frame = +3
Query: 6 LAKQAFDDAIAELDTLNEDSYKASTLIMQLLRDNLTLWTSDTQGDGDE 149
LAKQAFDDAIAELDTL E+SYK STLIMQLLRDNLTLWTSD DG +
Sbjct: 200 LAKQAFDDAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDNAEDGGD 247
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 83.4 bits (197), Expect = 5e-17
Identities = 39/48 (81%), Positives = 43/48 (89%)
Frame = +3
Query: 6 LAKQAFDDAIAELDTLNEDSYKASTLIMQLLRDNLTLWTSDTQGDGDE 149
LAKQAFD+AI+ELDTL E+SYK STLIMQLLRDNLTLWTSD Q DG +
Sbjct: 205 LAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGGD 252
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 82.2 bits (194), Expect = 1e-16
Identities = 41/52 (78%), Positives = 45/52 (86%), Gaps = 1/52 (1%)
Frame = +3
Query: 6 LAKQAFDDAIAELDTLNEDSYKASTLIMQLLRDNLTLWTSD-TQGDGDEPAE 158
LAKQAFD+AI+ELDTL E+SYK STLIMQLLRDNLTLWTSD T+ GDE E
Sbjct: 195 LAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDLTEDGGDEVKE 246
>11_06_0036 +
19474848-19475188,19475696-19475774,19475880-19476002,
19476970-19477086,19477169-19477228
Length = 239
Score = 80.2 bits (189), Expect = 5e-16
Identities = 37/48 (77%), Positives = 42/48 (87%)
Frame = +3
Query: 6 LAKQAFDDAIAELDTLNEDSYKASTLIMQLLRDNLTLWTSDTQGDGDE 149
LAKQAFD+AI+ELD+L E+SYK STLIMQLLRDNLTLWTSD DG +
Sbjct: 178 LAKQAFDEAISELDSLGEESYKDSTLIMQLLRDNLTLWTSDANDDGGD 225
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 79.0 bits (186), Expect = 1e-15
Identities = 38/48 (79%), Positives = 42/48 (87%)
Frame = +3
Query: 6 LAKQAFDDAIAELDTLNEDSYKASTLIMQLLRDNLTLWTSDTQGDGDE 149
LAKQAFD+AI+ELDTL+E+SYK STLIMQLLRDNLTLWTSD D E
Sbjct: 201 LAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDISEDTAE 248
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 77.4 bits (182), Expect = 3e-15
Identities = 36/41 (87%), Positives = 40/41 (97%)
Frame = +3
Query: 6 LAKQAFDDAIAELDTLNEDSYKASTLIMQLLRDNLTLWTSD 128
LAKQAFD+AI+ELDTL+E+SYK STLIMQLLRDNLTLWTSD
Sbjct: 419 LAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSD 459
>01_01_0767 +
5931031-5931281,5931414-5931594,5932020-5932129,
5932212-5932360,5932686-5932738,5933168-5933260
Length = 278
Score = 74.1 bits (174), Expect = 3e-14
Identities = 35/55 (63%), Positives = 42/55 (76%)
Frame = +3
Query: 3 QLAKQAFDDAIAELDTLNEDSYKASTLIMQLLRDNLTLWTSDTQGDGDEPAEGGD 167
QLAK AFD+A+AEL +L+E++YK STLIMQLLRDNL LW SD D D+ E D
Sbjct: 184 QLAKNAFDEAVAELPSLSEENYKDSTLIMQLLRDNLALWNSDMADDADDIRERTD 238
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 55.2 bits (127), Expect = 2e-08
Identities = 24/45 (53%), Positives = 34/45 (75%)
Frame = +3
Query: 3 QLAKQAFDDAIAELDTLNEDSYKASTLIMQLLRDNLTLWTSDTQG 137
Q+AKQA D+A AE+++ + YK S L+MQLL++NL LWTS+ G
Sbjct: 173 QVAKQALDEATAEINSAGVEGYKDSMLMMQLLKENLALWTSELTG 217
>04_04_0127 + 22957203-22957420,22957552-22957675,22957784-22958002
Length = 186
Score = 28.7 bits (61), Expect = 1.5
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -1
Query: 271 VMIPRQRRSRMLLVFL*TPMRGNACAGVSAA 179
++ PR R SR+ LVF T M AG SAA
Sbjct: 97 ILRPRARYSRLFLVFFDTAMLALLTAGASAA 127
>04_04_1588 - 34633057-34633824
Length = 255
Score = 28.3 bits (60), Expect = 2.0
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -3
Query: 206 KCVCWGECGEILVVAALGRLVAIALSV*RPK 114
+CVCW +++ ALG I +V +PK
Sbjct: 68 RCVCWTLLAVLVLAVALGATAGILYAVFKPK 98
>12_02_1024 - 25449163-25449824,25451882-25452191
Length = 323
Score = 27.9 bits (59), Expect = 2.6
Identities = 17/63 (26%), Positives = 30/63 (47%)
Frame = +3
Query: 54 NEDSYKASTLIMQLLRDNLTLWTSDTQGDGDEPAEGGDN*YLAALTPAHAFPLIGVYKKT 233
++D Y + LR ++ + D GD D+ E +A ++P H PL+G T
Sbjct: 51 DDDEYDGREFEEEFLRFSMMVDEEDDDGDDDDEVEVE---IIAVVSPPHR-PLVGARGTT 106
Query: 234 SSI 242
S++
Sbjct: 107 SAV 109
>09_02_0151 - 5035572-5035954,5036309-5036324,5036420-5037040
Length = 339
Score = 27.5 bits (58), Expect = 3.5
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -3
Query: 203 CV-CWGECGEILVVAALGRLVAIALSV*RPK 114
CV CW C L+VAAL A AL + +PK
Sbjct: 22 CVLCWCCCFLFLIVAALAGAAAYALFLYKPK 52
>08_02_0201 + 14200684-14201412
Length = 242
Score = 27.5 bits (58), Expect = 3.5
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 209 RKCVCWGECGEILVVAALGRLVAIALSV*RPK 114
R C+CW C +L+V A+ A L RPK
Sbjct: 53 RGCLCWCCCFLLLLVVAVAATSAYLLYACRPK 84
>04_04_1392 +
33201015-33201600,33202030-33202406,33202528-33202638,
33202720-33202815,33202899-33203570
Length = 613
Score = 27.5 bits (58), Expect = 3.5
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +2
Query: 239 HSRTSLARYHHRRRREPSLLKM-LKVVRSG 325
H R L +HH R PSLL++ L+ R G
Sbjct: 13 HHRVLLPSHHHHRAVPPSLLRLPLRAARRG 42
>07_03_0258 - 15907667-15907909,15909015-15909081,15910218-15910237
Length = 109
Score = 27.1 bits (57), Expect = 4.6
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +3
Query: 33 IAELDTLNEDSYKASTLIMQL-LRDNLTLWTSDTQGDGDEPAEGG 164
I +LD L + ++ I +L LR L W D GDGDE GG
Sbjct: 8 IIQLDKLLVRTIDSTQAIFELKLRLGLGSWDGD--GDGDEKVSGG 50
>03_06_0767 +
36126254-36126264,36126676-36126769,36127068-36127315,
36127391-36127647,36127949-36127998,36128056-36128286,
36128851-36128928,36129315-36129441,36129520-36129629,
36130003-36130152,36131106-36131183,36131293-36131421,
36131502-36131699,36132199-36132342
Length = 634
Score = 26.6 bits (56), Expect = 6.1
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3
Query: 224 INTDERKCVCWGECGE 177
++T+E C+CW E GE
Sbjct: 522 VHTNEVNCICWDEKGE 537
>11_04_0233 + 15168851-15170263
Length = 470
Score = 26.2 bits (55), Expect = 8.1
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 246 ERRWRGIITEDDASRRF 296
ER+WR +T+D RRF
Sbjct: 441 ERKWREFLTDDAVQRRF 457
>01_02_0053 +
10673264-10674510,10674552-10674576,10674802-10674886,
10675074-10675084
Length = 455
Score = 26.2 bits (55), Expect = 8.1
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2
Query: 60 LRSMCPVRRWHRRKPVWRVD 1
L+S+CPVRR K WR D
Sbjct: 16 LKSLCPVRRISSLKVPWRRD 35
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,949,320
Number of Sequences: 37544
Number of extensions: 160072
Number of successful extensions: 529
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 528
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 576724416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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