Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10823X
         (370 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73910-2|CAA98138.1|  248|Caenorhabditis elegans Hypothetical pr...    89   9e-19
U05038-1|AAA61872.1|  248|Caenorhabditis elegans 14-3-3 protein ...    89   9e-19
Z66564-2|CAA91474.1|  248|Caenorhabditis elegans Hypothetical pr...    89   1e-18
Z93779-1|CAB07849.2| 2103|Caenorhabditis elegans Hypothetical pr...    29   1.4  
Z78543-7|CAB01757.2| 2103|Caenorhabditis elegans Hypothetical pr...    29   1.4  
Z71178-6|CAA94880.2| 1185|Caenorhabditis elegans Hypothetical pr...    29   1.4  
Z66566-5|CAA91487.2| 2103|Caenorhabditis elegans Hypothetical pr...    29   1.4  
U97592-5|AAB52873.1|  597|Caenorhabditis elegans Hypothetical pr...    27   5.5  
U64842-1|AAB37083.2|  710|Caenorhabditis elegans Hypothetical pr...    26   7.3  

>Z73910-2|CAA98138.1|  248|Caenorhabditis elegans Hypothetical
           protein M117.2 protein.
          Length = 248

 Score = 89.0 bits (211), Expect = 9e-19
 Identities = 45/53 (84%), Positives = 46/53 (86%)
 Frame = +3

Query: 3   QLAKQAFDDAIAELDTLNEDSYKASTLIMQLLRDNLTLWTSDTQGDGDEPAEG 161
           QLAKQAFDDAIAELDTLNEDSYK STLIMQLLRDNLTLWTSD  G  D+  EG
Sbjct: 191 QLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDV-GAEDQEQEG 242


>U05038-1|AAA61872.1|  248|Caenorhabditis elegans 14-3-3 protein
           protein.
          Length = 248

 Score = 89.0 bits (211), Expect = 9e-19
 Identities = 45/53 (84%), Positives = 46/53 (86%)
 Frame = +3

Query: 3   QLAKQAFDDAIAELDTLNEDSYKASTLIMQLLRDNLTLWTSDTQGDGDEPAEG 161
           QLAKQAFDDAIAELDTLNEDSYK STLIMQLLRDNLTLWTSD  G  D+  EG
Sbjct: 191 QLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDV-GAEDQEQEG 242


>Z66564-2|CAA91474.1|  248|Caenorhabditis elegans Hypothetical
           protein F52D10.3a protein.
          Length = 248

 Score = 88.6 bits (210), Expect = 1e-18
 Identities = 45/57 (78%), Positives = 47/57 (82%), Gaps = 2/57 (3%)
 Frame = +3

Query: 3   QLAKQAFDDAIAELDTLNEDSYKASTLIMQLLRDNLTLWTSDTQGDGDE--PAEGGD 167
           QLAKQAFDDAIAELDTLNEDSYK STLIMQLLRDNLTLWTSD   D  +    EGG+
Sbjct: 192 QLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDAATDDTDANETEGGN 248


>Z93779-1|CAB07849.2| 2103|Caenorhabditis elegans Hypothetical
           protein T25C12.3 protein.
          Length = 2103

 Score = 28.7 bits (61), Expect = 1.4
 Identities = 17/56 (30%), Positives = 23/56 (41%)
 Frame = -3

Query: 362 DDTTFNIRRNGKVRCERLLTFLEATARVVFGDDTAPTTFSNATRFLINTDERKCVC 195
           D   FN RR G+  C +LLT   + A          T F+N T   +    + C C
Sbjct: 276 DANGFNFRRTGRFSCMQLLT---SPAPPTTTQAPVTTCFNNGTLLNVANQGQTCFC 328


>Z78543-7|CAB01757.2| 2103|Caenorhabditis elegans Hypothetical
           protein T25C12.3 protein.
          Length = 2103

 Score = 28.7 bits (61), Expect = 1.4
 Identities = 17/56 (30%), Positives = 23/56 (41%)
 Frame = -3

Query: 362 DDTTFNIRRNGKVRCERLLTFLEATARVVFGDDTAPTTFSNATRFLINTDERKCVC 195
           D   FN RR G+  C +LLT   + A          T F+N T   +    + C C
Sbjct: 276 DANGFNFRRTGRFSCMQLLT---SPAPPTTTQAPVTTCFNNGTLLNVANQGQTCFC 328


>Z71178-6|CAA94880.2| 1185|Caenorhabditis elegans Hypothetical protein
            B0024.8 protein.
          Length = 1185

 Score = 28.7 bits (61), Expect = 1.4
 Identities = 20/62 (32%), Positives = 28/62 (45%)
 Frame = +1

Query: 130  LKAMATSLPRAATTNISPHSPQHTHFLSSVFIRKRVAFENVVGAVSSPKTTRAVASKNVK 309
            LKA+   L  A T ++S  S +H H L+   I+  +     V  +  P  T A    NVK
Sbjct: 1043 LKAVMNQLAHALTAHLSSKSEEHKH-LARTCIQHTIRSIEPVSLL--PAMTSATKKSNVK 1099

Query: 310  SR 315
             R
Sbjct: 1100 QR 1101


>Z66566-5|CAA91487.2| 2103|Caenorhabditis elegans Hypothetical
           protein T25C12.3 protein.
          Length = 2103

 Score = 28.7 bits (61), Expect = 1.4
 Identities = 17/56 (30%), Positives = 23/56 (41%)
 Frame = -3

Query: 362 DDTTFNIRRNGKVRCERLLTFLEATARVVFGDDTAPTTFSNATRFLINTDERKCVC 195
           D   FN RR G+  C +LLT   + A          T F+N T   +    + C C
Sbjct: 276 DANGFNFRRTGRFSCMQLLT---SPAPPTTTQAPVTTCFNNGTLLNVANQGQTCFC 328


>U97592-5|AAB52873.1|  597|Caenorhabditis elegans Hypothetical
           protein C14A11.6 protein.
          Length = 597

 Score = 26.6 bits (56), Expect = 5.5
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +1

Query: 136 AMATSLPRAATTNISPHSPQHTHFLSSVFIRKRVAFE 246
           A +TS P + T+NI+P  P  T    S  I+++ AFE
Sbjct: 540 AASTSTPPSTTSNITPSRP--TTSEQSNTIKRKTAFE 574


>U64842-1|AAB37083.2|  710|Caenorhabditis elegans Hypothetical
           protein F25B4.5 protein.
          Length = 710

 Score = 26.2 bits (55), Expect = 7.3
 Identities = 12/20 (60%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
 Frame = +2

Query: 254 LARYHHRRRREPSLL-KMLK 310
           LARYH + RR+P L  K+LK
Sbjct: 538 LARYHQKSRRDPKLAQKVLK 557


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,394,711
Number of Sequences: 27780
Number of extensions: 127186
Number of successful extensions: 363
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 363
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 524900642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)