Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10822
         (486 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5MGF5 Cluster: Putative uncharacterized protein; n=2; ...    59   6e-08
UniRef50_UPI00015B60AE Cluster: PREDICTED: hypothetical protein;...    34   2.0  
UniRef50_Q0BU79 Cluster: Hypothetical cytosolic protein; n=1; Gr...    34   2.0  
UniRef50_Q8H6Z5 Cluster: Putative uncharacterized protein; n=1; ...    33   2.6  
UniRef50_A3PZT1 Cluster: Putative uncharacterized protein; n=1; ...    32   6.0  
UniRef50_O44565 Cluster: Laminin related. see also lmb-protein 1...    32   6.0  
UniRef50_P28618 Cluster: Pyrrolidone-carboxylate peptidase; n=12...    32   6.0  
UniRef50_Q4TGD5 Cluster: Chromosome undetermined SCAF3766, whole...    32   7.9  

>UniRef50_Q5MGF5 Cluster: Putative uncharacterized protein; n=2;
           Bombycoidea|Rep: Putative uncharacterized protein -
           Lonomia obliqua (Moth)
          Length = 74

 Score = 58.8 bits (136), Expect = 6e-08
 Identities = 27/41 (65%), Positives = 34/41 (82%)
 Frame = +1

Query: 223 FQLSGNSGRKQAAAAQAYYGNLVAGSIVSQLTAAAMVAPTP 345
           F  +G +    AAAAQAYYGN+VAGS++SQLT+AAM+APTP
Sbjct: 34  FGSAGIAAGSTAAAAQAYYGNVVAGSVISQLTSAAMLAPTP 74



 Score = 54.0 bits (124), Expect = 2e-06
 Identities = 24/27 (88%), Positives = 26/27 (96%)
 Frame = +2

Query: 173 IYGTGGLLTPLVAPVLGFSSAGIAAGS 253
           IYGTGGLLTP+VAP+LGF SAGIAAGS
Sbjct: 17  IYGTGGLLTPIVAPMLGFGSAGIAAGS 43


>UniRef50_UPI00015B60AE Cluster: PREDICTED: hypothetical protein;
           n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
           protein - Nasonia vitripennis
          Length = 101

 Score = 33.9 bits (74), Expect = 2.0
 Identities = 13/28 (46%), Positives = 22/28 (78%)
 Frame = -1

Query: 285 ISVVCLCSSGLLPAAIPAELKPSTGATN 202
           +++V +CS+G++PAA+PA L   T AT+
Sbjct: 10  VALVAVCSAGIVPAAVPAALTVGTYATS 37


>UniRef50_Q0BU79 Cluster: Hypothetical cytosolic protein; n=1;
           Granulibacter bethesdensis CGDNIH1|Rep: Hypothetical
           cytosolic protein - Granulobacter bethesdensis (strain
           ATCC BAA-1260 / CGDNIH1)
          Length = 90

 Score = 33.9 bits (74), Expect = 2.0
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = +1

Query: 109 QKLKEHGA--SSCISGKRGRRCCNIWHWGSVDSISGSRAR 222
           Q L+EHG    S ++G+R  RC N WH G  D +   R R
Sbjct: 42  QALREHGTFQGSMLAGRRILRC-NPWHQGGYDPVPAGRCR 80


>UniRef50_Q8H6Z5 Cluster: Putative uncharacterized protein; n=1;
           Phytophthora infestans|Rep: Putative uncharacterized
           protein - Phytophthora infestans (Potato late blight
           fungus)
          Length = 151

 Score = 33.5 bits (73), Expect = 2.6
 Identities = 18/44 (40%), Positives = 26/44 (59%)
 Frame = +1

Query: 199 SISGSRARFQLSGNSGRKQAAAAQAYYGNLVAGSIVSQLTAAAM 330
           S+SGS +   LS +SG   AA+A+A   +  AGS VS  T+  +
Sbjct: 91  SLSGSSSANSLSSSSGSTTAASAEATQSDSAAGSTVSGATSVTL 134


>UniRef50_A3PZT1 Cluster: Putative uncharacterized protein; n=1;
           Mycobacterium sp. JLS|Rep: Putative uncharacterized
           protein - Mycobacterium sp. (strain JLS)
          Length = 82

 Score = 32.3 bits (70), Expect = 6.0
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +3

Query: 252 ASRCCTSILRKFSGRQHCVTVDCCCHGSPHAMR 350
           A R   S+ R+  GR HCV +DC    S  A R
Sbjct: 25  ADRSSVSVQRRRGGRDHCVAIDCFAGRSVQAKR 57


>UniRef50_O44565 Cluster: Laminin related. see also lmb-protein 1;
            n=2; Caenorhabditis|Rep: Laminin related. see also
            lmb-protein 1 - Caenorhabditis elegans
          Length = 1067

 Score = 32.3 bits (70), Expect = 6.0
 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
 Frame = +1

Query: 136  SCISGKRGRRC--CNIWHWGSVDSISGSRARFQLSGNSGRKQAAAAQAYYG 282
            +C SG +G RC  C   HWGS   + G+  R   +GN       +  A  G
Sbjct: 973  NCKSGYQGERCGECAQNHWGSPREVGGTCERCDCNGNIDMAMEGSCDAATG 1023


>UniRef50_P28618 Cluster: Pyrrolidone-carboxylate peptidase; n=12;
           Bacilli|Rep: Pyrrolidone-carboxylate peptidase -
           Bacillus subtilis
          Length = 215

 Score = 32.3 bits (70), Expect = 6.0
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +1

Query: 88  LRIARREQKLKEHGASSCISGKRGRRCCNIWHWGSVDSIS 207
           L + R   K+KEHG  + +S   G   CN   +G +D IS
Sbjct: 117 LPVKRMTAKMKEHGIPAAVSYTAGTFVCNYLFYGLMDHIS 156


>UniRef50_Q4TGD5 Cluster: Chromosome undetermined SCAF3766, whole
           genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF3766,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer)
          Length = 328

 Score = 31.9 bits (69), Expect = 7.9
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = -2

Query: 218 AREPLMESTDPQCHILQHRRPRLPLMQLE 132
           A +PL   T+P+  +LQ+RRP+L L  L+
Sbjct: 5   AEQPLSLRTEPKLRVLQYRRPKLELQLLK 33


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 432,867,686
Number of Sequences: 1657284
Number of extensions: 7998097
Number of successful extensions: 21243
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 20773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21240
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 28130105105
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)