Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10817
         (766 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g42920.2 68418.m05233 expressed protein                             42   4e-04
At5g42920.1 68418.m05232 expressed protein                             42   4e-04
At1g45233.2 68414.m05190 expressed protein Since this genomic se...    38   0.006
At4g25340.1 68417.m03647 immunophilin-related / FKBP-type peptid...    31   0.64 
At3g58620.1 68416.m06533 tetratricopeptide repeat (TPR)-containi...    29   4.5  
At3g16630.2 68416.m02126 kinesin motor family protein similar to...    29   4.5  
At3g16630.1 68416.m02125 kinesin motor family protein similar to...    29   4.5  
At3g07780.1 68416.m00949 expressed protein                             29   4.5  

>At5g42920.2 68418.m05233 expressed protein
          Length = 819

 Score = 41.9 bits (94), Expect = 4e-04
 Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
 Frame = +2

Query: 521 NLKIIVVKFTVSLPKPVTGVSAADVLNG--HSILNELYPGDTGDDSPHPATSYLLKNAGI 694
           +LK++++KF   L   V  V A    +G   +I   L+P D G + PH +T  +L   G 
Sbjct: 358 SLKLVILKFEYLLKLNVVCVGAEGSQDGPEKNIFCNLFPDDAGLEPPHQSTKLIL---GD 414

Query: 695 SESFSHFIPEIGRPYVWAQRMCGL 766
            ++F        RPY W Q + G+
Sbjct: 415 GQTFDE--NRTSRPYKWVQHLAGI 436


>At5g42920.1 68418.m05232 expressed protein
          Length = 702

 Score = 41.9 bits (94), Expect = 4e-04
 Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
 Frame = +2

Query: 521 NLKIIVVKFTVSLPKPVTGVSAADVLNG--HSILNELYPGDTGDDSPHPATSYLLKNAGI 694
           +LK++++KF   L   V  V A    +G   +I   L+P D G + PH +T  +L   G 
Sbjct: 241 SLKLVILKFEYLLKLNVVCVGAEGSQDGPEKNIFCNLFPDDAGLEPPHQSTKLIL---GD 297

Query: 695 SESFSHFIPEIGRPYVWAQRMCGL 766
            ++F        RPY W Q + G+
Sbjct: 298 GQTFDE--NRTSRPYKWVQHLAGI 319


>At1g45233.2 68414.m05190 expressed protein Since this genomic
           sequence region is unfinished, the annotated gene may be
           missing a stop codon or start codon
          Length = 448

 Score = 38.3 bits (85), Expect = 0.006
 Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
 Frame = +2

Query: 527 KIIVVKFTVSLPKPVTGVSAADVLNG--HSILNELYPGDTGDDSPHPATSYLLKNAGISE 700
           +++++KF   L   V  V   +  +G   +IL  L+P D+G + PH +   +L N  + +
Sbjct: 321 ELVMLKFEYLLKLNVVCVGIEESEDGLEKNILCNLFPDDSGLEPPHQSAKLILGNDHVFD 380

Query: 701 SFSHFIPEIGRPYVWAQRMCGL 766
                     RPY WAQ + G+
Sbjct: 381 K-----SRTSRPYKWAQHLAGI 397


>At4g25340.1 68417.m03647 immunophilin-related / FKBP-type
           peptidyl-prolyl cis-trans isomerase-related immunophilin
           FKBP46 - Spodoptera frugiperda (fall
           armyworm),PIR2:A55320
          Length = 477

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
 Frame = +3

Query: 363 TKKKRHHRTK----NVSKEDKAEAKIKRVFKKHPLN-VQVSVKAEDGTALNLIFHTS*T 524
           +KKK++ + K    NV  E+  + +   V KK  ++ +  + KA+DGTA N +  +S T
Sbjct: 265 SKKKKNQKEKKKGENVLNEEAGQVQTGNVLKKQDISQISSNTKAQDGTANNAMSESSKT 323


>At3g58620.1 68416.m06533 tetratricopeptide repeat (TPR)-containing
           protein contains Pfam profile PF00515 TPR Domain
          Length = 682

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
 Frame = -2

Query: 669 EVAGWGESSPVSPGYSSFKIECPFRTSA-ADTPV--TGLGSDTVN 544
           E++G  ++SPV PG  +  ++   R SA A TP+  +GLG   VN
Sbjct: 87  ELSGLSQTSPVKPGSVNRNLKPGHRRSASAGTPLIYSGLGFSPVN 131


>At3g16630.2 68416.m02126 kinesin motor family protein similar to
           mitotic centromere-associated kinesin GB:AAC27660 from
           [Homo sapiens]; contains Pfam profile PF00225: Kinesin
           motor domain
          Length = 794

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +3

Query: 402 KEDKAEAKIKRVFKKHPLNVQVSVKAED 485
           KE+ + AKIK V +K PLN + + K E+
Sbjct: 186 KENNSVAKIKVVVRKRPLNKKETAKKEE 213


>At3g16630.1 68416.m02125 kinesin motor family protein similar to
           mitotic centromere-associated kinesin GB:AAC27660 from
           [Homo sapiens]; contains Pfam profile PF00225: Kinesin
           motor domain
          Length = 794

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +3

Query: 402 KEDKAEAKIKRVFKKHPLNVQVSVKAED 485
           KE+ + AKIK V +K PLN + + K E+
Sbjct: 186 KENNSVAKIKVVVRKRPLNKKETAKKEE 213


>At3g07780.1 68416.m00949 expressed protein
          Length = 566

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = +1

Query: 538 CEVYCIATQTCHWCICC*CSKWT 606
           C  +  A  TC W  C  CS WT
Sbjct: 231 CNKFDFAVNTCRWIGCDVCSHWT 253


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,999,819
Number of Sequences: 28952
Number of extensions: 260948
Number of successful extensions: 584
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 581
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1712086600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)