Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10816X
         (349 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    24   0.59 
AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc fi...    21   4.2  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   5.5  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    20   9.6  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          20   9.6  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      20   9.6  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.8 bits (49), Expect = 0.59
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +3

Query: 108 YIVRSRKNIDVQYVTICNPPTPQLISIFVDL 200
           Y+  S + +  +++ I  PPTP L+  F  +
Sbjct: 809 YLPNSLRILLKRFLDITTPPTPNLLRYFASI 839


>AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc
           finger domain-Z2 isoform protein.
          Length = 71

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = +2

Query: 110 YSKIQKKYRCTIC 148
           +++ Q++YRC IC
Sbjct: 29  HAERQEEYRCVIC 41


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 20.6 bits (41), Expect = 5.5
 Identities = 5/10 (50%), Positives = 9/10 (90%)
 Frame = +2

Query: 122 QKKYRCTICY 151
           +K Y+CT+C+
Sbjct: 257 EKVYKCTLCH 266


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 147 VTICNPPTPQLISIFVD 197
           VTI N    QL+++F D
Sbjct: 465 VTIQNVDVSQLVTLFTD 481


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 36  NYPPFSQNGLLN 1
           NYPPF  +  LN
Sbjct: 238 NYPPFMLSNSLN 249


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 36  NYPPFSQNGLLN 1
           NYPPF  +  LN
Sbjct: 238 NYPPFMLSNSLN 249


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,584
Number of Sequences: 438
Number of extensions: 1679
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  7936320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)