Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10814
(286 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0057 + 7851500-7852041,7852190-7852622,7853702-7854496 28 1.3
12_02_0188 - 15158824-15159215,15159299-15159809,15159885-151600... 27 3.1
12_02_0078 + 13290432-13290924,13290998-13291201,13291290-132920... 26 5.4
12_02_0925 - 24398851-24398998,24399478-24399718,24399886-244005... 25 7.1
09_04_0256 + 16148820-16148998,16149547-16150241,16150317-161505... 25 7.1
09_04_0144 + 15071723-15071993,15072078-15072632,15072671-150726... 25 7.1
08_01_0463 - 4075037-4075316,4075997-4076151,4076818-4078861,408... 25 7.1
07_03_1652 - 28409097-28409165,28409788-28409911,28410317-284105... 25 7.1
07_03_0014 - 12428713-12428860,12429340-12429580,12429664-124303... 25 7.1
05_01_0595 + 5344721-5345249,5349183-5349264,5349813-5350507,535... 25 7.1
03_03_0039 - 13986844-13986907,13987219-13987273,13987492-139876... 25 7.1
02_05_1149 + 34471730-34471790,34471975-34472056,34472605-344732... 25 7.1
02_05_1110 - 34182943-34182963,34183122-34183301,34184201-341845... 25 7.1
01_05_0117 - 18300157-18301106,18301149-18301543,18302592-183026... 25 7.1
10_05_0114 + 9294747-9294788,9294883-9294996,9295066-9295173,929... 25 9.4
04_04_1109 + 30965143-30965312,30965406-30965586,30965669-309661... 25 9.4
01_01_0631 - 4752606-4752706,4754039-4755578 25 9.4
>11_02_0057 + 7851500-7852041,7852190-7852622,7853702-7854496
Length = 589
Score = 27.9 bits (59), Expect = 1.3
Identities = 12/46 (26%), Positives = 21/46 (45%)
Frame = -2
Query: 138 NSSSFLQTVDYLFPHGCLSYISWYCVICCNLSTLCFSLKSGEIAGQ 1
N+ +FL + GCL + W+ + C LC +L + + Q
Sbjct: 360 NAVAFLGPLMRAAERGCLQVVEWFVNLGCRDMELCLALTAATSSSQ 405
>12_02_0188 -
15158824-15159215,15159299-15159809,15159885-15160015,
15160107-15160310,15160385-15161066,15161158-15161414,
15161491-15161631,15161731-15162136
Length = 907
Score = 26.6 bits (56), Expect = 3.1
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -2
Query: 132 SSFLQTVDYLFPHGCLSYISWY 67
S F T+D + H CLS +SW+
Sbjct: 399 SKFSGTMDGRYAHACLSSMSWW 420
>12_02_0078 +
13290432-13290924,13290998-13291201,13291290-13292024,
13292108-13292499
Length = 607
Score = 25.8 bits (54), Expect = 5.4
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2
Query: 132 SSFLQTVDYLFPHGCLSYISWY 67
S F T + + H CLS ISW+
Sbjct: 68 SKFSGTTEGRYAHACLSSISWW 89
>12_02_0925 -
24398851-24398998,24399478-24399718,24399886-24400536,
24400625-24400828,24400902-24401583,24401678-24401934,
24402010-24402704,24403150-24403397
Length = 1041
Score = 25.4 bits (53), Expect = 7.1
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -2
Query: 132 SSFLQTVDYLFPHGCLSYISWY 67
S F T++ + H CLS +SW+
Sbjct: 531 SKFSGTLEGKYAHACLSSLSWW 552
>09_04_0256 +
16148820-16148998,16149547-16150241,16150317-16150573,
16150668-16151349,16151423-16151626,16151715-16152449,
16152533-16152698,16153253-16153400
Length = 1021
Score = 25.4 bits (53), Expect = 7.1
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -2
Query: 132 SSFLQTVDYLFPHGCLSYISWY 67
S F T++ + H CLS +SW+
Sbjct: 508 SKFSGTLEGRYAHACLSSLSWW 529
>09_04_0144 +
15071723-15071993,15072078-15072632,15072671-15072681,
15072954-15073012,15073962-15074040
Length = 324
Score = 25.4 bits (53), Expect = 7.1
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1
Query: 133 FILLADCRLFIPPWLFKLYILVLCNL 56
F+ + CR IPP LF + + LC L
Sbjct: 163 FVEMDTCRDIIPPELFDRWSVSLCEL 188
>08_01_0463 -
4075037-4075316,4075997-4076151,4076818-4078861,
4080757-4081589
Length = 1103
Score = 25.4 bits (53), Expect = 7.1
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 20 LFNEKQSVLKLQQITQYQDI*LKQPWGN 103
LF+E+Q + KLQ+I Q + + + WG+
Sbjct: 260 LFDERQLINKLQEILQEKSL-VSSSWGS 286
>07_03_1652 -
28409097-28409165,28409788-28409911,28410317-28410557,
28410641-28411375,28411464-28411667,28411741-28412422,
28412517-28412773,28412849-28413543,28414003-28414250
Length = 1084
Score = 25.4 bits (53), Expect = 7.1
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -2
Query: 132 SSFLQTVDYLFPHGCLSYISWY 67
S F T++ + H CLS +SW+
Sbjct: 531 SKFSGTLEGRYAHACLSSLSWW 552
>07_03_0014 -
12428713-12428860,12429340-12429580,12429664-12430398,
12430487-12430690,12430764-12431445,12431540-12431796,
12431872-12432566,12433012-12433172,12434039-12434383,
12434399-12434631,12434656-12434740
Length = 1261
Score = 25.4 bits (53), Expect = 7.1
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -2
Query: 132 SSFLQTVDYLFPHGCLSYISWY 67
S F T++ + H CLS +SW+
Sbjct: 723 SKFSGTLEGRYAHACLSSLSWW 744
>05_01_0595 +
5344721-5345249,5349183-5349264,5349813-5350507,
5350583-5350839,5350934-5351615,5351689-5351892,
5351981-5352715,5352799-5353181
Length = 1188
Score = 25.4 bits (53), Expect = 7.1
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -2
Query: 132 SSFLQTVDYLFPHGCLSYISWY 67
S F T++ + H CLS +SW+
Sbjct: 652 SKFSGTLEGRYAHACLSSLSWW 673
>03_03_0039 -
13986844-13986907,13987219-13987273,13987492-13987606,
13987652-13987774,13987962-13988015,13988352-13988411,
13988522-13988584,13988790-13988863,13989177-13989261,
13989376-13989456,13989764-13989856,13990275-13990339,
13990407-13990482,13990570-13990635,13991094-13991153,
13991233-13991322,13991755-13991817,13992502-13992625,
13993031-13993271,13993355-13993624,13993715-13994089,
13994178-13994381,13994455-13995136,13995231-13995279,
13995362-13995488,13995564-13996258,13996718-13996965
Length = 1433
Score = 25.4 bits (53), Expect = 7.1
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -2
Query: 132 SSFLQTVDYLFPHGCLSYISWY 67
S F T++ + H CLS +SW+
Sbjct: 504 SKFSGTLEGRYAHACLSSLSWW 525
>02_05_1149 +
34471730-34471790,34471975-34472056,34472605-34473299,
34473375-34473631,34473726-34474407,34474481-34474684,
34474773-34474903,34475068-34475263,34475347-34475587,
34476067-34476214
Length = 898
Score = 25.4 bits (53), Expect = 7.1
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -2
Query: 132 SSFLQTVDYLFPHGCLSYISWY 67
S F T++ + H CLS +SW+
Sbjct: 496 SKFSGTLEGRYAHACLSSLSWW 517
>02_05_1110 -
34182943-34182963,34183122-34183301,34184201-34184546,
34184794-34184846
Length = 199
Score = 25.4 bits (53), Expect = 7.1
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -1
Query: 124 LADCRLFIPPWLFKLYILVLCNLL*FEYTLLFIEKW 17
L C PPWL +++V NLL +F + W
Sbjct: 41 LPHCHRPTPPWLPATFVVVAANLLASSRKPIFGQIW 76
>01_05_0117 - 18300157-18301106,18301149-18301543,18302592-18302681,
18303723-18303836,18303903-18304046,18316147-18316312,
18316396-18317130,18317219-18317422,18317496-18318177,
18318272-18318528,18318604-18319298,18319345-18319382,
18319847-18319928,18320018-18320112,18320443-18320526,
18320601-18320891,18321521-18321853,18321948-18322150,
18322243-18322399,18322482-18322585,18322675-18322835,
18323511-18323824,18324317-18324589,18324666-18324967,
18325459-18325549,18326140-18326190,18326700-18326768,
18326926-18327017,18327082-18327148,18328582-18328746,
18329027-18329103,18329572-18329766,18330208-18330275,
18331081-18331172,18331399-18331522,18331608-18331705,
18332384-18332997,18333620-18333626
Length = 2892
Score = 25.4 bits (53), Expect = 7.1
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -2
Query: 132 SSFLQTVDYLFPHGCLSYISWY 67
S F T++ + H CLS +SW+
Sbjct: 1864 SKFSGTLEGRYAHACLSSLSWW 1885
>10_05_0114 +
9294747-9294788,9294883-9294996,9295066-9295173,
9295774-9296145,9296584-9296652,9296754-9296825,
9297070-9297198,9297690-9297770,9298622-9298807,
9299135-9299860
Length = 632
Score = 25.0 bits (52), Expect = 9.4
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -1
Query: 133 FILLADC-RLFIPPWLFKLYILVLCNLL*FEYTLLFIEK 20
FIL+A L I WL + +L+LC L E++ I K
Sbjct: 250 FILMASAVLLLIMQWLVGILVLILCLLKRGEFSGQIISK 288
>04_04_1109 +
30965143-30965312,30965406-30965586,30965669-30966100,
30966176-30966277,30966376-30966681,30966755-30966817,
30967758-30967856
Length = 450
Score = 25.0 bits (52), Expect = 9.4
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -3
Query: 137 TVHPSCRLSTIYSPMVV*VIYPGT 66
TVHPSC T +++ YPGT
Sbjct: 60 TVHPSCLKVTTTLSLLIKQNYPGT 83
>01_01_0631 - 4752606-4752706,4754039-4755578
Length = 546
Score = 25.0 bits (52), Expect = 9.4
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +3
Query: 63 HSTRIYNLNNHGGINSRQSARRMNCW 140
H + N+N HGG +SR + + W
Sbjct: 343 HGIKFVNVNQHGGSSSRSFSITLWSW 368
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,861,203
Number of Sequences: 37544
Number of extensions: 119316
Number of successful extensions: 277
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 276
length of database: 14,793,348
effective HSP length: 70
effective length of database: 12,165,268
effective search space used: 291966432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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