Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10814
         (286 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g41250.1 68418.m05013 exostosin family protein contains Pfam ...    26   3.5  
At4g08850.2 68417.m01455 leucine-rich repeat family protein / pr...    26   3.5  
At4g08850.1 68417.m01454 leucine-rich repeat family protein / pr...    26   3.5  
At3g23470.1 68416.m02957 cyclopropane-fatty-acyl-phospholipid sy...    26   3.5  
At2g27690.1 68415.m03355 cytochrome P450, putative similar to Cy...    26   4.6  
At4g08290.2 68417.m01369 nodulin MtN21 family protein similar to...    25   6.1  
At3g59910.1 68416.m06686 expressed protein                             25   8.1  
At3g23530.1 68416.m02961 cyclopropane fatty acid synthase, putat...    25   8.1  
At3g23480.1 68416.m02958 cyclopropane fatty acid synthase-relate...    25   8.1  
At2g17970.1 68415.m02084 oxidoreductase, 2OG-Fe(II) oxygenase fa...    25   8.1  

>At5g41250.1 68418.m05013 exostosin family protein contains Pfam
           profile: PF03016 exostosin family
          Length = 561

 Score = 26.2 bits (55), Expect = 3.5
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -3

Query: 281 FFFFIMIYKIVLL*FYSIVIYNNFEICL 198
           F FF ++Y  + L F + + YNNF +C+
Sbjct: 36  FLFFFLLY--LCLSFTTGISYNNFHMCI 61


>At4g08850.2 68417.m01455 leucine-rich repeat family protein /
           protein kinase family protein contains Pfam domains
           PF00560: Leucine Rich Repeat and PF00069: Protein kinase
           domain
          Length = 1009

 Score = 26.2 bits (55), Expect = 3.5
 Identities = 20/65 (30%), Positives = 30/65 (46%)
 Frame = -2

Query: 198 ASVICGNTGLKFLAAYANSTNSSSFLQTVDYLFPHGCLSYISWYCVICCNLSTLCFSLKS 19
           A+V   N  LK+ + + N T+SS     V+   P+      SWY V C   S +  +L +
Sbjct: 46  ATVEEANALLKWKSTFTNQTSSSKLSSWVN---PNTSSFCTSWYGVACSLGSIIRLNLTN 102

Query: 18  GEIAG 4
             I G
Sbjct: 103 TGIEG 107


>At4g08850.1 68417.m01454 leucine-rich repeat family protein /
           protein kinase family protein contains Pfam domains
           PF00560: Leucine Rich Repeat and PF00069: Protein kinase
           domain
          Length = 1045

 Score = 26.2 bits (55), Expect = 3.5
 Identities = 20/65 (30%), Positives = 30/65 (46%)
 Frame = -2

Query: 198 ASVICGNTGLKFLAAYANSTNSSSFLQTVDYLFPHGCLSYISWYCVICCNLSTLCFSLKS 19
           A+V   N  LK+ + + N T+SS     V+   P+      SWY V C   S +  +L +
Sbjct: 46  ATVEEANALLKWKSTFTNQTSSSKLSSWVN---PNTSSFCTSWYGVACSLGSIIRLNLTN 102

Query: 18  GEIAG 4
             I G
Sbjct: 103 TGIEG 107


>At3g23470.1 68416.m02957 cyclopropane-fatty-acyl-phospholipid
           synthase family protein similar to cyclopropane synthase
           [Sterculia foetida] GI:21069167; contains Pfam profile
           PF02353: Cyclopropane-fatty-acyl-phospholipid synthase
          Length = 406

 Score = 26.2 bits (55), Expect = 3.5
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -2

Query: 159 AAYANSTNSSSFLQTVDYLFPHGCLSYISWYCVICCNLSTLC 34
           A Y  S  +S F+   +Y+FP GCL  ++       + S LC
Sbjct: 277 ALYDESRLTSGFI--TEYIFPGGCLPSLARVTSAMASSSRLC 316


>At2g27690.1 68415.m03355 cytochrome P450, putative similar to
           Cytochrome P450 94A1  (P450-dependent fatty acid
           omega-hydroxylase) (SP:O81117) {Vicia sativa}; contains
           Pfam profile: PF00067 cytochrome P450; supported by
           cDNA: gi_13877668
          Length = 495

 Score = 25.8 bits (54), Expect = 4.6
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -3

Query: 278 FFFIMIYKIVLL*FYSIVIYNNFEIC 201
           FFFI+I+ +  L F   + Y N EIC
Sbjct: 12  FFFIIIFSLFHLLFLQKLRYCNCEIC 37


>At4g08290.2 68417.m01369 nodulin MtN21 family protein similar to
           MtN21 GI:2598575 (root nodule development) from
           [Medicago truncatula]
          Length = 282

 Score = 25.4 bits (53), Expect = 6.1
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -1

Query: 118 DCRLFIPPWLFKLYILVL 65
           D RLF P +  +LYILVL
Sbjct: 251 DARLFAPLYTVRLYILVL 268


>At3g59910.1 68416.m06686 expressed protein
          Length = 611

 Score = 25.0 bits (52), Expect = 8.1
 Identities = 16/59 (27%), Positives = 24/59 (40%)
 Frame = -2

Query: 201 FASVICGNTGLKFLAAYANSTNSSSFLQTVDYLFPHGCLSYISWYCVICCNLSTLCFSL 25
           FAS  C    +K L    N+    +FL  +      GC+  + W+    C    LC +L
Sbjct: 363 FASHYCKIGTMKCLVEEGNAI---AFLGPLMRAAERGCMQVVQWFVKRGCRDMELCLAL 418


>At3g23530.1 68416.m02961 cyclopropane fatty acid synthase, putative
           / CPA-FA synthase, putative similar to cyclopropane
           synthase [Sterculia foetida] GI:21069167; contains Pfam
           profiles PF02353: Cyclopropane-fatty-acyl-phospholipid
           synthase, PF01593: amine oxidase, flavin-containing
          Length = 867

 Score = 25.0 bits (52), Expect = 8.1
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -2

Query: 135 SSSFLQTVDYLFPHGCLSYISWYCVICCNLSTLC 34
           SS F++  +Y+FP GCL  ++       + S LC
Sbjct: 748 SSDFIK--EYIFPGGCLPSLARVTTAMSSSSRLC 779


>At3g23480.1 68416.m02958 cyclopropane fatty acid synthase-related
           similar to cyclopropane synthase [Sterculia foetida]
           GI:21069167
          Length = 513

 Score = 25.0 bits (52), Expect = 8.1
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = -2

Query: 153 YANSTNSSSFLQTVDYLFPHGCLSYISWYCVICCNLSTLC 34
           Y  S  +S F+   +Y+FP GCL  ++       + S LC
Sbjct: 332 YDESRLTSGFI--TEYIFPGGCLPSLARVTSAMASSSRLC 369


>At2g17970.1 68415.m02084 oxidoreductase, 2OG-Fe(II) oxygenase
           family protein similar to At2g17960, At4g36090; contains
           PF03171 2OG-Fe(II) oxygenase superfamily domain
          Length = 507

 Score = 25.0 bits (52), Expect = 8.1
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +3

Query: 66  STRIYNLNNHGGINSRQSARR 128
           ++R   LNNH G N R   RR
Sbjct: 444 TSRFSRLNNHNGTNQRGHGRR 464


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,942,492
Number of Sequences: 28952
Number of extensions: 108578
Number of successful extensions: 276
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 274
length of database: 12,070,560
effective HSP length: 69
effective length of database: 10,072,872
effective search space used: 251821800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)