Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10810X
         (405 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         23   0.86 
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    23   1.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   4.6  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   4.6  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       20   8.0  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    20   8.0  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           20   8.0  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    20   8.0  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    20   8.0  

>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 23.4 bits (48), Expect = 0.86
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +2

Query: 161 TKRNEHFQPRTRR*AESEQRH 223
           T+RN +++PRT R     ++H
Sbjct: 227 TRRNPYYRPRTSRTEPPRRKH 247


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 8/63 (12%)
 Frame = +3

Query: 90  PGGGHTNIFDSEPE--PPRTGRRAVPPSAT------STFSHGQGDEPKANNGTSVATNGQ 245
           PGG H+     EPE    ++    VP S +      + FS GQ + P ++  +       
Sbjct: 18  PGGDHSENMQDEPENLSNKSNSITVPLSISTGQRLPANFSFGQVNSPPSSTSSGSLGQFP 77

Query: 246 STP 254
           +TP
Sbjct: 78  ATP 80


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 5/11 (45%), Positives = 6/11 (54%)
 Frame = -2

Query: 164  WWNGTAPGPRW 132
            WW+ T   P W
Sbjct: 1042 WWSSTTTSPWW 1052


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 13/29 (44%), Positives = 13/29 (44%)
 Frame = -3

Query: 172  VALGGTARRPVLGGSGSESKMLVWPPPGG 86
            V L GTA  P  G SG  S     PP  G
Sbjct: 1104 VPLKGTAVPPPSGSSGPGSTGSKSPPVAG 1132



 Score = 20.6 bits (41), Expect = 6.1
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 287  PPAGSVAPGSPRS 249
            PP+GS  PGS  S
Sbjct: 1113 PPSGSSGPGSTGS 1125


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 151 RRPVLGGSGSESKMLVWPPPG 89
           R+  +GGS  ES++L    PG
Sbjct: 387 RQLAVGGSQEESRVLDLSKPG 407


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +2

Query: 68  IKQGAXPPRWWPH*HLRF 121
           +++   PP+W+ H  L F
Sbjct: 217 LRRDTAPPQWYQHQPLLF 234


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 235 PTVSPLLGEPGAT 273
           P  SPL+ EPG++
Sbjct: 94  PLASPLVQEPGSS 106


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -3

Query: 190 PWLKVLVALGGTA 152
           P LKVL+++GG A
Sbjct: 97  PKLKVLLSVGGNA 109


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -3

Query: 190 PWLKVLVALGGTA 152
           P LK+L+A+GG A
Sbjct: 588 PDLKILLAIGGWA 600


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,860
Number of Sequences: 336
Number of extensions: 1875
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8752267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)