Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10810X
(405 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0519 - 34481751-34482722 32 0.20
01_05_0564 + 23312419-23312987,23314652-23314751,23314832-233150... 31 0.26
09_06_0172 + 21329904-21331512,21331595-21331740,21332333-213325... 29 1.1
01_01_0219 + 1863478-1864041,1864459-1865109 29 1.1
02_05_1147 - 34447519-34448042,34448126-34449092,34449458-344496... 29 1.4
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 28 2.4
05_04_0002 + 17031662-17032264 28 2.4
04_03_0938 + 20933008-20933288,20933408-20933473,20933568-20934099 28 2.4
01_07_0082 - 40965947-40967023 28 2.4
10_01_0129 + 1535823-1537196 28 3.2
02_04_0172 - 20595357-20596129,20596994-20597138 28 3.2
04_04_0545 + 26141335-26141793,26141883-26141981 27 4.3
03_02_0155 - 5974118-5974173,5974242-5974314,5974393-5974500,597... 27 4.3
01_06_0333 + 28528413-28529364,28529504-28529539,28529800-28530872 27 4.3
10_06_0085 + 10511258-10512327,10512978-10513058,10513318-105133... 27 5.6
04_04_1351 - 32827136-32827984 27 5.6
01_06_0565 + 30287253-30287502,30287522-30289010,30289133-302892... 27 5.6
09_04_0695 - 19547101-19548010,19548089-19548587,19549461-195497... 27 7.5
09_04_0684 - 19442335-19442990,19443774-19443839,19443935-194440... 27 7.5
09_02_0053 - 3665202-3665900,3666109-3666359,3666612-3666938,366... 27 7.5
08_02_0911 + 22530370-22530497,22531083-22531126,22531224-225312... 27 7.5
07_03_1136 + 24218601-24218734,24218769-24219906 27 7.5
06_01_0603 - 4350124-4350590,4350995-4353608 27 7.5
06_01_0039 - 386576-387098,387173-387468,387744-388067,388165-38... 27 7.5
01_07_0046 - 40714701-40714763,40715266-40715343,40716398-407164... 27 7.5
12_02_1007 - 25248653-25249078,25249956-25250021,25250108-252502... 26 9.9
12_01_0227 - 1718726-1721183,1721804-1721957,1722090-1722165,172... 26 9.9
10_08_0271 - 16382655-16384451 26 9.9
08_02_1481 - 27413397-27413414,27413738-27414367,27414471-27415484 26 9.9
08_01_1000 + 10154024-10154147,10155500-10155761,10155839-101558... 26 9.9
07_01_0789 - 6150257-6151046,6151167-6151390,6151816-6151991,615... 26 9.9
06_03_1490 + 30497980-30498102,30499034-30500156,30500914-305011... 26 9.9
05_05_0282 + 23813500-23813584,23813676-23813734,23813940-23814368 26 9.9
03_03_0261 + 15949984-15950427 26 9.9
03_01_0639 - 4678993-4679034,4679880-4679945,4680040-4680150,468... 26 9.9
02_04_0311 + 21936812-21937861 26 9.9
02_01_0153 - 1073790-1074026,1074110-1074595,1074686-1075213,107... 26 9.9
01_01_1130 + 8959909-8960396,8960588-8960638,8960736-8960827,896... 26 9.9
>03_06_0519 - 34481751-34482722
Length = 323
Score = 31.9 bits (69), Expect = 0.20
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +1
Query: 76 GCSAPPVVATLTSSIPSRSHRGPGAVPFHQAQRALSATDKEMSRK 210
G APP ++ T + RS R GA P H A+ S+T+ S +
Sbjct: 28 GAEAPPATSSSTPTTARRSKRLAGAPPDHPAEAGPSSTNARRSSR 72
>01_05_0564 +
23312419-23312987,23314652-23314751,23314832-23315055,
23315212-23316041,23316161-23316275,23316786-23316905,
23317410-23317450,23317546-23317595,23317684-23317719,
23317836-23317856
Length = 701
Score = 31.5 bits (68), Expect = 0.26
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Frame = +3
Query: 33 PFNVGLNDGARLSSRVLXPPGGGHTNIFDSEPEP----PRTGRRAVPPS--ATSTFSHGQ 194
P ++ ++D A++ S G + F P PR+G ++ S A ST +HGQ
Sbjct: 374 PSSMKMDDNAKVQSGPAVRRDYGARDRFQHADGPVRQSPRSGGTSLNSSGFAASTVNHGQ 433
Query: 195 GDEPKANNGTSVATNGQST 251
+ G + +N QST
Sbjct: 434 SSVVRTQGGNGIPSNNQST 452
>09_06_0172 +
21329904-21331512,21331595-21331740,21332333-21332556,
21333689-21334448
Length = 912
Score = 29.5 bits (63), Expect = 1.1
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +3
Query: 126 PEPPRTGRRAVPPSATSTFSHGQGDEPKANNGTSVATNG 242
P PP A PP S + +G G P G +VA G
Sbjct: 167 PPPPYGSGYAPPPPYGSGYGYGYGPAPDYGGGMAVANGG 205
>01_01_0219 + 1863478-1864041,1864459-1865109
Length = 404
Score = 29.5 bits (63), Expect = 1.1
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -3
Query: 178 VLVALGGTARRPVLGGSGSESKMLVWPPPGGXSTLLDRRAPSLRPT 41
+L +L ++ RP++ S S VWPPP ST +P PT
Sbjct: 46 MLHSLVPSSSRPIMQPSPSPETPCVWPPPLPSSTPTPAPSPPSTPT 91
>02_05_1147 -
34447519-34448042,34448126-34449092,34449458-34449657,
34449867-34450051,34450130-34450228,34450316-34450357,
34450516-34450860,34450956-34451101,34451213-34451296,
34451424-34451502,34451596-34451675,34451824-34451875,
34451992-34452026
Length = 945
Score = 29.1 bits (62), Expect = 1.4
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 129 EPPRTGRRAVPPSATSTFSHGQGDEPKANNGTSVATN 239
+ P+ G A P A STF H Q P A N +++ N
Sbjct: 586 QAPQAG--APYPQAASTFPHSQASHPAATNPSTIPQN 620
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 28.3 bits (60), Expect = 2.4
Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Frame = +3
Query: 87 PPGGGHTNIFDSEPEPPRTGRRAV-PPSATSTFSHGQGDEPKANNGTSVATNGQSTP 254
PP G N F + P PP R + P+ +T S G P + TNG P
Sbjct: 653 PPAPGIGNKFPAPPPPPPPPRSSSRTPTGAATSSKGPPPPPPPPLPPANRTNGPGVP 709
>05_04_0002 + 17031662-17032264
Length = 200
Score = 28.3 bits (60), Expect = 2.4
Identities = 12/38 (31%), Positives = 24/38 (63%)
Frame = +3
Query: 141 TGRRAVPPSATSTFSHGQGDEPKANNGTSVATNGQSTP 254
+G+R P S+TST + G GD+ + +S +++ ++P
Sbjct: 54 SGKRGPPTSSTSTMASG-GDDDEEEGASSSSSSADTSP 90
>04_03_0938 + 20933008-20933288,20933408-20933473,20933568-20934099
Length = 292
Score = 28.3 bits (60), Expect = 2.4
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +3
Query: 42 VGLNDGARLSSRVLXPPGGGHTNI--FDSEPEPPRTGRRAVPPSATSTFSHG 191
VGL+DG + SRVL G H+ + + EP +GR V A HG
Sbjct: 169 VGLDDGTVIRSRVLVGCDGVHSAVARWLGMAEPASSGRSCVRGLAVYPGGHG 220
>01_07_0082 - 40965947-40967023
Length = 358
Score = 28.3 bits (60), Expect = 2.4
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +3
Query: 87 PPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKANNG 221
PP G+ + ++P PP+ G PP + + G G P+A G
Sbjct: 257 PPQYGYG--YPAQPPPPQAGYGYPPPPPQAGYGGGYGYPPQAGYG 299
>10_01_0129 + 1535823-1537196
Length = 457
Score = 27.9 bits (59), Expect = 3.2
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = -3
Query: 157 TARRPVLGGSGSESKMLVWPPPGGXSTLLDRRAPSLRPTLNG 32
+ RR GG G PPGG S L R S RP +G
Sbjct: 5 SGRRLAAGGGGGGGGAPRGSPPGGGSPLNSSRRSSRRPRPSG 46
Score = 26.6 bits (56), Expect = 7.5
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +3
Query: 117 DSEPEPPRTGRRAVPPS 167
D +P PPR RR PPS
Sbjct: 64 DGQPPPPRRRRRGEPPS 80
>02_04_0172 - 20595357-20596129,20596994-20597138
Length = 305
Score = 27.9 bits (59), Expect = 3.2
Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 5/75 (6%)
Frame = -2
Query: 353 WAAPGPFGLDCRLWERALLQQVPP----AGSVAPGSPRSGLTVGRY*SAVVRF-RLISLS 189
W G L CR W R ++P A V SP S ++ +AV F L +L+
Sbjct: 43 WPLGGGCSLPCRQWGRLACPRLPTEAVVAVEVVTASPPSSPSLPEAVAAVAFFDELDALA 102
Query: 188 VAESARCAWWNGTAP 144
E +W +P
Sbjct: 103 AGEEVPAVFWPPRSP 117
>04_04_0545 + 26141335-26141793,26141883-26141981
Length = 185
Score = 27.5 bits (58), Expect = 4.3
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +3
Query: 48 LNDGARLSSRVLXPPGGGHTNIFDSEPEPPRTGRRAVPPS 167
L GA+ SSR PPG G + PP TGRR + S
Sbjct: 14 LLSGAQPSSRRATPPGNGQRS-----RRPPATGRRRLAAS 48
>03_02_0155 -
5974118-5974173,5974242-5974314,5974393-5974500,
5975189-5976914,5977065-5977620,5978008-5978485
Length = 998
Score = 27.5 bits (58), Expect = 4.3
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = +3
Query: 120 SEPEPPRTGRRAVPPSATSTFSHGQ--GDEPKANNGTSVATNG 242
S P PP + VPPS T+ + GQ EP+ G + G
Sbjct: 94 SPPPPPPSSPPPVPPSPTAAPTTGQSWNSEPERKEGATATDVG 136
>01_06_0333 + 28528413-28529364,28529504-28529539,28529800-28530872
Length = 686
Score = 27.5 bits (58), Expect = 4.3
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = +3
Query: 60 ARLSSRVLXPPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSH 188
A L +R PP GG T + + P+ P AT F H
Sbjct: 171 ASLYTRAPRPPRGGKTYLLTAAPQCPYPDASLAAALATGLFDH 213
>10_06_0085 +
10511258-10512327,10512978-10513058,10513318-10513396,
10514160-10514201
Length = 423
Score = 27.1 bits (57), Expect = 5.6
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 67 YQAGCSAPPVVATLTSSIPSRSHRGPGAVPFHQAQRALS 183
Y+A CSA P + T +++ R+ R AV R+LS
Sbjct: 33 YEAACSADPELGTFDTALRRRASRAITAVASGVEVRSLS 71
>04_04_1351 - 32827136-32827984
Length = 282
Score = 27.1 bits (57), Expect = 5.6
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = +3
Query: 93 GGGHTNIFDSEPEPPRT--GRRAVPPSATST 179
GG + P PP+ GR+A PPS T T
Sbjct: 161 GGSGGGGYSPSPSPPKRHGGRKACPPSPTPT 191
>01_06_0565 +
30287253-30287502,30287522-30289010,30289133-30289277,
30289679-30289729
Length = 644
Score = 27.1 bits (57), Expect = 5.6
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +3
Query: 93 GGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKA-NNGTSVAT-NGQSTP 254
GGG+T P P +G P ++ D P + ++G+S T G STP
Sbjct: 250 GGGYTPTPSDTPPSPSSGSSPTTPGGGGGYTPTPSDTPPSPSSGSSRTTPGGCSTP 305
>09_04_0695 -
19547101-19548010,19548089-19548587,19549461-19549728,
19551025-19551687,19551849-19552060,19552203-19552593,
19552659-19553107,19553454-19553790
Length = 1242
Score = 26.6 bits (56), Expect = 7.5
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +3
Query: 81 LXPPGGGHTNIFDSEPEPPRTGRRAVPPSATS 176
L PP GH+ D PP A P+ATS
Sbjct: 8 LSPPATGHSGHGDLNSPPPAAPAGASSPAATS 39
>09_04_0684 -
19442335-19442990,19443774-19443839,19443935-19444032,
19444787-19445157
Length = 396
Score = 26.6 bits (56), Expect = 7.5
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +3
Query: 87 PPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEP 206
PPG G F+S P P G+ VPP H QG+ P
Sbjct: 240 PPGQG----FNSPPPP---GQGPVPPRDAPPMHHAQGNVP 272
>09_02_0053 -
3665202-3665900,3666109-3666359,3666612-3666938,
3667017-3667242,3667328-3667846,3668789-3668863,
3668963-3669052,3669142-3669222,3672176-3672222,
3672620-3672685,3673834-3673930,3673983-3674046,
3674160-3674278,3674448-3674563,3676675-3676708
Length = 936
Score = 26.6 bits (56), Expect = 7.5
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 163 GGTARRPVLGGSGSESKMLVWPP 95
G + R +GGSG SK + WPP
Sbjct: 635 GKSKARKGVGGSGVRSKPINWPP 657
>08_02_0911 +
22530370-22530497,22531083-22531126,22531224-22531267,
22531428-22531946,22532032-22532257,22532336-22532662,
22532915-22533165,22533374-22534072
Length = 745
Score = 26.6 bits (56), Expect = 7.5
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 163 GGTARRPVLGGSGSESKMLVWPP 95
G + R +GGSG SK + WPP
Sbjct: 444 GKSKARKGVGGSGVRSKPINWPP 466
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 26.6 bits (56), Expect = 7.5
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = -3
Query: 163 GGTARRPVLGGSGSESKMLVWPPPGGXSTLLDR 65
GG A R VLGG G L PP GG L R
Sbjct: 140 GGGAPRRVLGGGGG-GGALARPPGGGRGGALGR 171
>06_01_0603 - 4350124-4350590,4350995-4353608
Length = 1026
Score = 26.6 bits (56), Expect = 7.5
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Frame = +3
Query: 48 LNDGARLSSRVLXPPGGGH-TNIFDSEPEPPRTGR-----RAVPPSATSTF 182
L GAR++ +VL P GGG + F E E R R R + +T+TF
Sbjct: 693 LRGGARVAVKVLDPKGGGEVSGSFKRECEVLRRTRHKNLVRVITTCSTATF 743
>06_01_0039 - 386576-387098,387173-387468,387744-388067,388165-388276,
388355-388482,388914-389048,389122-389250,389620-389787,
389897-390019,390099-390227,390543-390866,390946-392901
Length = 1448
Score = 26.6 bits (56), Expect = 7.5
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 88 PPVVATLTSSIPSRSHRGPGAVPF 159
PP A + IP +S GPG+V +
Sbjct: 1211 PPTKALFQNGIPDQSSNGPGSVSY 1234
>01_07_0046 -
40714701-40714763,40715266-40715343,40716398-40716462,
40717075-40717201,40717279-40717319,40717621-40717690,
40718070-40718191,40719047-40719107,40719182-40719292,
40719387-40719461,40719815-40719842,40719929-40719978,
40720228-40720290,40720385-40720426,40720562-40720631,
40720663-40720713,40721857-40722041,40722374-40722775
Length = 567
Score = 26.6 bits (56), Expect = 7.5
Identities = 20/49 (40%), Positives = 24/49 (48%)
Frame = -3
Query: 166 LGGTARRPVLGGSGSESKMLVWPPPGGXSTLLDRRAPSLRPTLNGVEVI 20
LG TAR P S + + +V PPP ST R A + RPT V I
Sbjct: 124 LGRTARSP----SPALGRNIVEPPPTVRSTSAGRPAVASRPTTTVVPPI 168
>12_02_1007 -
25248653-25249078,25249956-25250021,25250108-25250260,
25250961-25251336,25252001-25252143
Length = 387
Score = 26.2 bits (55), Expect = 9.9
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +3
Query: 93 GGGHTNIFDSEPEPPRTGRRAVPPSATST 179
GGG + FD P P R + PP A T
Sbjct: 62 GGGGASSFDQPPPPVSYHRLSPPPPAMGT 90
>12_01_0227 -
1718726-1721183,1721804-1721957,1722090-1722165,
1722327-1722485,1722552-1722662,1722791-1722841,
1722948-1723192,1723745-1725278
Length = 1595
Score = 26.2 bits (55), Expect = 9.9
Identities = 12/20 (60%), Positives = 14/20 (70%), Gaps = 2/20 (10%)
Frame = -2
Query: 149 APGPRWLRLG--IEDVSVAT 96
APGPRWLRL + +S AT
Sbjct: 526 APGPRWLRLAATLRPISPAT 545
>10_08_0271 - 16382655-16384451
Length = 598
Score = 26.2 bits (55), Expect = 9.9
Identities = 21/71 (29%), Positives = 27/71 (38%), Gaps = 10/71 (14%)
Frame = +3
Query: 63 RLSSRVLXPPGGGHTNIFDSEPEPPRTGRRAVP----------PSATSTFSHGQGDEPKA 212
R +S V GGG T+ P PP G A P PS +T H + A
Sbjct: 64 RKASPVDRGGGGGGTSFSGHSPSPPDAGGSAKPESPHDSGVKAPSELTTVEHTKQPSEPA 123
Query: 213 NNGTSVATNGQ 245
+ GT G+
Sbjct: 124 STGTESDDGGK 134
>08_02_1481 - 27413397-27413414,27413738-27414367,27414471-27415484
Length = 553
Score = 26.2 bits (55), Expect = 9.9
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = -3
Query: 181 KVLVALGGT-ARRPVLGGSGSESKMLVWPPPGGXSTLLDRRAPSLRPTLNGVEVILF 14
K+ A GG+ ARR ++ S E++++V PG LL A + RP +LF
Sbjct: 96 KLAAAAGGSPARRRLMALSLGETRVVVTADPGVARELLASAAFADRPVKESAYGMLF 152
>08_01_1000 +
10154024-10154147,10155500-10155761,10155839-10155885,
10155967-10155998,10156079-10156146,10156214-10156605,
10156811-10157009,10157494-10157636,10157722-10158366,
10158493-10158551,10158725-10158823
Length = 689
Score = 26.2 bits (55), Expect = 9.9
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Frame = +3
Query: 90 PGGGHTNIFDSEPEPPRTGRRAVPP---SATSTF-SHGQGDEPKANNGTSVAT 236
PG T+ FD PE PR + +P S F + G G PK+ G + A+
Sbjct: 537 PGEAGTSHFDDMPEIPRFSPQNIPSPIRDDNSPFKTPGAGGTPKSRLGETPAS 589
>07_01_0789 -
6150257-6151046,6151167-6151390,6151816-6151991,
6152778-6153801
Length = 737
Score = 26.2 bits (55), Expect = 9.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 90 PGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEP 206
PGG +++FDS P PP A PS++++ + P
Sbjct: 204 PGGFISSLFDSMP-PPTLDTAAAEPSSSASAERREPPPP 241
>06_03_1490 +
30497980-30498102,30499034-30500156,30500914-30501132,
30501228-30501454,30501810-30501884,30502250-30502321,
30502765-30502863,30502975-30503046,30503131-30503245,
30503455-30503523,30503625-30503952,30504320-30504437,
30504522-30505448
Length = 1188
Score = 26.2 bits (55), Expect = 9.9
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 82 SAPPVVATLTSSIPSRSHRGPGAVPFH 162
S+PPVV+ +S+PS + GP A P H
Sbjct: 294 SSPPVVS---NSLPSANALGPSAGPHH 317
>05_05_0282 + 23813500-23813584,23813676-23813734,23813940-23814368
Length = 190
Score = 26.2 bits (55), Expect = 9.9
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +1
Query: 43 LASMTELVYQAGCSAPPVVATLTSSIPSRSHRGPGAVPFHQAQR 174
L+S + + SA +VA T+ + + PGA P H +R
Sbjct: 33 LSSQQQHLSSPNISADDMVAATTTDVEVNDYPAPGANPRHNPKR 76
>03_03_0261 + 15949984-15950427
Length = 147
Score = 26.2 bits (55), Expect = 9.9
Identities = 14/50 (28%), Positives = 20/50 (40%)
Frame = -1
Query: 273 CGSGLS*EWTDRWSLLKCRCSLSAHLLVRG*KCSLRLVERHGARSSVAPA 124
CG G E RW L+ C + +V G + A ++ APA
Sbjct: 74 CGHGFHAECIGRWLPLRAECPICRRPVVTGADGQAPVAVAEAAAAAAAPA 123
>03_01_0639 -
4678993-4679034,4679880-4679945,4680040-4680150,
4680266-4680304,4680394-4680493,4680597-4680712,
4680897-4681035,4681151-4681222,4681331-4681434,
4681616-4681867
Length = 346
Score = 26.2 bits (55), Expect = 9.9
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +3
Query: 81 LXPPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQ--GDEPKANNGT 224
L PP +++ + R RAV SAT+T + G+ GD+ + + GT
Sbjct: 16 LAPPHHRRSSVASAAAAAARRRPRAVQCSATATAASGEGAGDDVELSRGT 65
>02_04_0311 + 21936812-21937861
Length = 349
Score = 26.2 bits (55), Expect = 9.9
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 93 GGGHTNIFDSEPEPPRTGRRAV 158
GG H + P PP+TG RAV
Sbjct: 20 GGFHVANAQASPAPPQTGTRAV 41
>02_01_0153 -
1073790-1074026,1074110-1074595,1074686-1075213,
1075421-1075513,1075620-1075671,1075800-1075904,
1076020-1076180
Length = 553
Score = 26.2 bits (55), Expect = 9.9
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = -3
Query: 136 GGSGSESKMLVWPPPGGXSTLLDRRAPSLRPTLNGVEVILF 14
GG+G + WPPP S D A + R G + LF
Sbjct: 155 GGAGDDGGGQAWPPPETPSFQWDGGADAQRLMYGGSSLNLF 195
>01_01_1130 +
8959909-8960396,8960588-8960638,8960736-8960827,
8960964-8961054,8961877-8961937,8962172-8962216,
8962318-8962391,8962565-8962637,8963288-8963345,
8963398-8963468,8963801-8963837,8964040-8964128,
8964207-8964263,8964366-8964449,8964529-8964627,
8964765-8964869,8965145-8965216,8965308-8965497,
8965810-8966207
Length = 744
Score = 26.2 bits (55), Expect = 9.9
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +3
Query: 126 PEPPRTGRRAVPPSATSTFSHGQGDEPKAN-NGTSVATNGQSTP 254
P PP G PPS+ + E + + + TSV G++ P
Sbjct: 87 PPPPTNGTLTPPPSSAPSGGRATSSEARESPHATSVDDGGRAPP 130
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,542,450
Number of Sequences: 37544
Number of extensions: 285162
Number of successful extensions: 1213
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1211
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 706675332
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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