Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10810X
(405 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical ... 32 0.14
AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical ... 26 0.55
Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical pr... 29 1.3
AF025460-2|AAF02169.3| 545|Caenorhabditis elegans Prion-like-(q... 29 1.3
U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore co... 29 1.7
L23650-1|AAA27955.1| 1076|Caenorhabditis elegans Egg laying defe... 28 2.9
U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical pr... 27 3.9
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 27 3.9
Z54218-3|CAA90955.2| 654|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 27 5.1
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 27 6.8
AF427477-1|AAL65145.1| 527|Caenorhabditis elegans UNC-62 splice... 27 6.8
AF427476-1|AAL65144.1| 523|Caenorhabditis elegans UNC-62 splice... 27 6.8
AF427475-1|AAL65143.1| 564|Caenorhabditis elegans UNC-62 splice... 27 6.8
AF427474-1|AAL65142.1| 560|Caenorhabditis elegans UNC-62 splice... 27 6.8
AC006692-5|AAV58860.1| 490|Caenorhabditis elegans Uncoordinated... 27 6.8
AC006692-4|AAF39975.1| 527|Caenorhabditis elegans Uncoordinated... 27 6.8
AC006692-3|AAO61420.1| 523|Caenorhabditis elegans Uncoordinated... 27 6.8
AC006692-2|AAF39974.1| 564|Caenorhabditis elegans Uncoordinated... 27 6.8
AC006692-1|AAO61421.1| 560|Caenorhabditis elegans Uncoordinated... 27 6.8
Z66564-8|CAM84731.1| 892|Caenorhabditis elegans Hypothetical pr... 26 9.0
AL032659-3|CAA21749.2| 892|Caenorhabditis elegans Hypothetical ... 26 9.0
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 26 9.0
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 26 9.0
AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen prot... 26 9.0
>AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical
protein Y106G6D.7 protein.
Length = 948
Score = 32.3 bits (70), Expect = 0.14
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = +3
Query: 3 DK*KNKMTSTPFNVGLNDGARLSSRVLXPPGGGHTNIFDSEPEPPRTGRRAVPPSATSTF 182
+K KN + FN N G + + P T++ ++ PP+TGR+ + P+ + F
Sbjct: 287 NKYKNNYKAPEFNNDFNGGNKFNQ--FPPRNAQSTDLSENRAAPPQTGRKTLMPTPQAPF 344
Query: 183 SH 188
+
Sbjct: 345 QN 346
>AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical
protein Y56A3A.6 protein.
Length = 798
Score = 25.8 bits (54), Expect(2) = 0.55
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 132 PPRTGRRAVPPSATSTFSHGQGDE 203
PP T R + PPSATS+ DE
Sbjct: 66 PPGTVRASFPPSATSSVVSDGSDE 89
Score = 23.0 bits (47), Expect(2) = 0.55
Identities = 15/45 (33%), Positives = 17/45 (37%)
Frame = +3
Query: 12 KNKMTSTPFNVGLNDGARLSSRVLXPPGGGHTNIFDSEPEPPRTG 146
K K T P ND S+R PP T + PPR G
Sbjct: 14 KKKTTPAPAAPPPND----SNRTTPPPSSEETAVVPEPVMPPRKG 54
>Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical
protein F26C11.3 protein.
Length = 1317
Score = 29.1 bits (62), Expect = 1.3
Identities = 23/75 (30%), Positives = 30/75 (40%)
Frame = +3
Query: 27 STPFNVGLNDGARLSSRVLXPPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEP 206
STP GL + GG T+ F + E P T + +ATST S
Sbjct: 402 STP-TTGLTTLSTNEQSTSTSSGGHSTSTFGTTSETPET---STDFTATSTSSSSDSSTQ 457
Query: 207 KANNGTSVATNGQST 251
+N TS NG +T
Sbjct: 458 SSNAQTSTIENGSTT 472
>AF025460-2|AAF02169.3| 545|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 41
protein.
Length = 545
Score = 29.1 bits (62), Expect = 1.3
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Frame = +1
Query: 73 AGCSAPPVVATLTSSIPSRSHRGPGAVPFHQAQRALSATDKEMSRKRTTALQ*RPTVS-- 246
AG ++ ++ TS+ S SH + P HQ A SA +++ T+A P S
Sbjct: 46 AGATSSSAASSSTSTPSSSSHHKKSSPPHHQKSAAPSAPPRDV----TSAHAPPPPASSA 101
Query: 247 PLLGEP--GATDPA 282
P++G P GAT A
Sbjct: 102 PIVGAPRQGATPQA 115
>U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore
complex protein protein11 protein.
Length = 805
Score = 28.7 bits (61), Expect = 1.7
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +3
Query: 120 SEPEPPRTGRRAVPPSATSTFSHGQGDEPKANNGTSVATNG 242
S P+P G A +A+S FS G AN G + T G
Sbjct: 5 SAPKPSIFGGTAATTTASSGFSFGNSSTSTANTGGNTNTTG 45
>L23650-1|AAA27955.1| 1076|Caenorhabditis elegans Egg laying defective
protein 45 protein.
Length = 1076
Score = 27.9 bits (59), Expect = 2.9
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = +3
Query: 57 GARLSSRVLXPPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKANN 218
GA S P G++N+ + P G R PP+ ++ G P++NN
Sbjct: 1011 GAGGSEEQSAPARSGNSNV--TSPPDRAQGLRGPPPTGRNSLPRRDGPPPRSNN 1062
>U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical protein
C34E10.8 protein.
Length = 1024
Score = 27.5 bits (58), Expect = 3.9
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = +3
Query: 126 PEPPRTGRRAVPPSATSTFSHGQGDEPKANNGTSVATNGQSTP 254
P P RA +A SH + + P A+ +S A+ Q P
Sbjct: 925 PTPSGRTPRAAAIAANQAISHSKPNVPSASTSSSAASTDQENP 967
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 27.5 bits (58), Expect = 3.9
Identities = 21/61 (34%), Positives = 24/61 (39%)
Frame = +3
Query: 15 NKMTSTPFNVGLNDGARLSSRVLXPPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQ 194
NK F G N GA PP G S P PPR G +PP +F G+
Sbjct: 740 NKPPPPMFQQGFNAGAP------PPPFGRGAGPMSSFPPPPRGGMHHMPP--PPSFRGGR 791
Query: 195 G 197
G
Sbjct: 792 G 792
>Z54218-3|CAA90955.2| 654|Caenorhabditis elegans Hypothetical
protein F37B12.2 protein.
Length = 654
Score = 27.1 bits (57), Expect = 5.1
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -3
Query: 235 VATEVPLFAFGSSPCPWLKVLVALGG 158
VA VP+F ++P P+++ L ALGG
Sbjct: 204 VAINVPIFKDTNTPSPFVEDLSALGG 229
>Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical
protein C09G5.6 protein.
Length = 948
Score = 27.1 bits (57), Expect = 5.1
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Frame = +3
Query: 123 EPEPP---RT--GRRAVPPSATSTFSHGQGDEPKANNGTSVATNGQSTP 254
+PEPP RT G RA PP+ATST+ G N G A++ + P
Sbjct: 128 KPEPPTMPRTIQGFRAPPPAATSTYRPPHGSN-YDNYGREPASSRRPYP 175
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 26.6 bits (56), Expect = 6.8
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -3
Query: 232 ATEVPLFAFGSSPCPWLKVLVALGGTARRPVLGGSGSE 119
+T + L GS+P ++ A GGT R P + G +
Sbjct: 347 STSISLNGIGSTPTRQFEITQAYGGTIRGPPMAIGGGQ 384
>AF427477-1|AAL65145.1| 527|Caenorhabditis elegans UNC-62 splice
variant 1b-7b protein.
Length = 527
Score = 26.6 bits (56), Expect = 6.8
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 153 AVPPSATSTFSHGQGDEPKANNGTSVATNGQS 248
A +++S+ S+ GD P AN GT +T G S
Sbjct: 249 AAAAASSSSSSNQAGDHPLANGGTLHSTAGAS 280
>AF427476-1|AAL65144.1| 523|Caenorhabditis elegans UNC-62 splice
variant 1b-7a protein.
Length = 523
Score = 26.6 bits (56), Expect = 6.8
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 153 AVPPSATSTFSHGQGDEPKANNGTSVATNGQS 248
A +++S+ S+ GD P AN GT +T G S
Sbjct: 249 AAAAASSSSSSNQAGDHPLANGGTLHSTAGAS 280
>AF427475-1|AAL65143.1| 564|Caenorhabditis elegans UNC-62 splice
variant 1a-7b protein.
Length = 564
Score = 26.6 bits (56), Expect = 6.8
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 153 AVPPSATSTFSHGQGDEPKANNGTSVATNGQS 248
A +++S+ S+ GD P AN GT +T G S
Sbjct: 286 AAAAASSSSSSNQAGDHPLANGGTLHSTAGAS 317
>AF427474-1|AAL65142.1| 560|Caenorhabditis elegans UNC-62 splice
variant 1a-7a protein.
Length = 560
Score = 26.6 bits (56), Expect = 6.8
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 153 AVPPSATSTFSHGQGDEPKANNGTSVATNGQS 248
A +++S+ S+ GD P AN GT +T G S
Sbjct: 286 AAAAASSSSSSNQAGDHPLANGGTLHSTAGAS 317
>AC006692-5|AAV58860.1| 490|Caenorhabditis elegans Uncoordinated
protein 62, isoform g protein.
Length = 490
Score = 26.6 bits (56), Expect = 6.8
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 153 AVPPSATSTFSHGQGDEPKANNGTSVATNGQS 248
A +++S+ S+ GD P AN GT +T G S
Sbjct: 212 AAAAASSSSSSNQAGDHPLANGGTLHSTAGAS 243
>AC006692-4|AAF39975.1| 527|Caenorhabditis elegans Uncoordinated
protein 62, isoform b protein.
Length = 527
Score = 26.6 bits (56), Expect = 6.8
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 153 AVPPSATSTFSHGQGDEPKANNGTSVATNGQS 248
A +++S+ S+ GD P AN GT +T G S
Sbjct: 249 AAAAASSSSSSNQAGDHPLANGGTLHSTAGAS 280
>AC006692-3|AAO61420.1| 523|Caenorhabditis elegans Uncoordinated
protein 62, isoform e protein.
Length = 523
Score = 26.6 bits (56), Expect = 6.8
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 153 AVPPSATSTFSHGQGDEPKANNGTSVATNGQS 248
A +++S+ S+ GD P AN GT +T G S
Sbjct: 249 AAAAASSSSSSNQAGDHPLANGGTLHSTAGAS 280
>AC006692-2|AAF39974.1| 564|Caenorhabditis elegans Uncoordinated
protein 62, isoform a protein.
Length = 564
Score = 26.6 bits (56), Expect = 6.8
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 153 AVPPSATSTFSHGQGDEPKANNGTSVATNGQS 248
A +++S+ S+ GD P AN GT +T G S
Sbjct: 286 AAAAASSSSSSNQAGDHPLANGGTLHSTAGAS 317
>AC006692-1|AAO61421.1| 560|Caenorhabditis elegans Uncoordinated
protein 62, isoform f protein.
Length = 560
Score = 26.6 bits (56), Expect = 6.8
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 153 AVPPSATSTFSHGQGDEPKANNGTSVATNGQS 248
A +++S+ S+ GD P AN GT +T G S
Sbjct: 286 AAAAASSSSSSNQAGDHPLANGGTLHSTAGAS 317
>Z66564-8|CAM84731.1| 892|Caenorhabditis elegans Hypothetical
protein Y71H9A.1 protein.
Length = 892
Score = 26.2 bits (55), Expect = 9.0
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +1
Query: 28 QHHSTLASMTELVYQAGCSAPPVVATLTSSIPSRSHRGPGAVP 156
QHH L + + C + PVVA +S+ S S P + P
Sbjct: 705 QHHLLLIPDGPICGPSRCESRPVVAMAEASLCSSSSVNPSSYP 747
>AL032659-3|CAA21749.2| 892|Caenorhabditis elegans Hypothetical
protein Y71H9A.1 protein.
Length = 892
Score = 26.2 bits (55), Expect = 9.0
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +1
Query: 28 QHHSTLASMTELVYQAGCSAPPVVATLTSSIPSRSHRGPGAVP 156
QHH L + + C + PVVA +S+ S S P + P
Sbjct: 705 QHHLLLIPDGPICGPSRCESRPVVAMAEASLCSSSSVNPSSYP 747
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 26.2 bits (55), Expect = 9.0
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 128 GATEDRAPCRSTKRNEHFQPRTRR*AESEQRHFSSD 235
G TE+ +T RNE + + R+ E E R S +
Sbjct: 622 GVTEETTTTTTTTRNEEIERKRRKKKEEEDRKKSEE 657
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 26.2 bits (55), Expect = 9.0
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 128 GATEDRAPCRSTKRNEHFQPRTRR*AESEQRHFSSD 235
G TE+ +T RNE + + R+ E E R S +
Sbjct: 844 GVTEETTTTTTTTRNEEIERKRRKKKEEEDRKKSEE 879
>AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen protein
70 protein.
Length = 530
Score = 26.2 bits (55), Expect = 9.0
Identities = 23/80 (28%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Frame = +3
Query: 21 MTSTPFNVGLNDGARLSSR--VLXPPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQ 194
+T TP + + G R S PPG T + P PP VPP +S +
Sbjct: 210 VTVTPPSPSVTPGGRPGSTPPATFPPGSVSTVRYTPGPTPPAPWTYTVPP-----YSGYR 264
Query: 195 GDEPKANNGTSVATNGQSTP 254
P N+ +V Q+TP
Sbjct: 265 TIPPVYNHYETVPPAAQTTP 284
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,273,741
Number of Sequences: 27780
Number of extensions: 189218
Number of successful extensions: 667
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 667
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 641068680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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