Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10808
(620 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 146 2e-36
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 145 4e-36
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 122 4e-29
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 107 1e-24
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 67 2e-12
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 60 3e-10
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 57 2e-09
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 57 2e-09
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 26 3.8
SPCC584.05 |sec1||SNARE binding protein Sec1|Schizosaccharomyces... 26 3.8
SPCC4G3.18 |||conserved fungal family|Schizosaccharomyces pombe|... 26 5.1
SPBC2G2.12 |||histidine-tRNA ligase|Schizosaccharomyces pombe|ch... 26 5.1
SPCC777.03c |||nifs homolog|Schizosaccharomyces pombe|chr 3|||Ma... 26 5.1
SPAC9.10 |||amino acid permease, unknown 2|Schizosaccharomyces p... 25 6.7
SPBC30D10.14 |||dienelactone hydrolase family|Schizosaccharomyce... 25 8.8
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 146 bits (355), Expect = 2e-36
Identities = 70/85 (82%), Positives = 79/85 (92%)
Frame = +3
Query: 3 TLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIH 182
TLSSS QASIEIDSLFEGIDFYTSITRARFEEL ADLFR TMEPVE+ LRD+K+DKA ++
Sbjct: 271 TLSSSAQASIEIDSLFEGIDFYTSITRARFEELCADLFRKTMEPVERVLRDSKVDKASVN 330
Query: 183 DIVLVGGSTRIPKVQKLLQDFFNGR 257
+IVLVGGSTRIP+VQKL+ DFFNG+
Sbjct: 331 EIVLVGGSTRIPRVQKLVSDFFNGK 355
Score = 74.5 bits (175), Expect = 1e-14
Identities = 44/98 (44%), Positives = 49/98 (50%)
Frame = +2
Query: 215 PQGAEAPARFL*WKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGI 394
P+ + + F KE KSINPDE +L GD SE+ QD GI
Sbjct: 342 PRVQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAVLTGDTSEKTQDLLLLDVAPLSMGI 401
Query: 395 ETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQ 508
ETAGGVMT LIKRN YSDNQPGVLIQ
Sbjct: 402 ETAGGVMTPLIKRNTTIPTKKSEIFSTYSDNQPGVLIQ 439
Score = 64.1 bits (149), Expect = 2e-11
Identities = 28/32 (87%), Positives = 30/32 (93%)
Frame = +1
Query: 508 IFEGERAMTKDNNLLGKFELTGIPPAPRGVPQ 603
+FEGERA TKD NLLGKFEL+GIPPAPRGVPQ
Sbjct: 440 VFEGERARTKDCNLLGKFELSGIPPAPRGVPQ 471
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 145 bits (352), Expect = 4e-36
Identities = 68/85 (80%), Positives = 80/85 (94%)
Frame = +3
Query: 3 TLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIH 182
TLSSS QASIEIDSL+EGIDFYTSITRARFEEL ADLFR+TMEPVEK LRD+K+DK+ ++
Sbjct: 271 TLSSSAQASIEIDSLYEGIDFYTSITRARFEELCADLFRNTMEPVEKVLRDSKIDKSSVN 330
Query: 183 DIVLVGGSTRIPKVQKLLQDFFNGR 257
+IVLVGGSTRIP++QKL+ DFFNG+
Sbjct: 331 EIVLVGGSTRIPRIQKLVSDFFNGK 355
Score = 72.9 bits (171), Expect = 3e-14
Identities = 42/85 (49%), Positives = 44/85 (51%)
Frame = +2
Query: 254 KELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKR 433
KE KSINPDE IL GD SE+ QD GIETAGGVMT LIKR
Sbjct: 355 KEPCKSINPDEAVAYGAAVQAAILVGDTSEKTQDLLLLDVAPLSLGIETAGGVMTPLIKR 414
Query: 434 NXXXXXXXXXXXXXYSDNQPGVLIQ 508
N Y+DNQPGVLIQ
Sbjct: 415 NTTIPTKKSEVFSTYADNQPGVLIQ 439
Score = 64.1 bits (149), Expect = 2e-11
Identities = 28/32 (87%), Positives = 30/32 (93%)
Frame = +1
Query: 508 IFEGERAMTKDNNLLGKFELTGIPPAPRGVPQ 603
+FEGERA TKD NLLGKFEL+GIPPAPRGVPQ
Sbjct: 440 VFEGERARTKDCNLLGKFELSGIPPAPRGVPQ 471
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 122 bits (294), Expect = 4e-29
Identities = 55/85 (64%), Positives = 73/85 (85%)
Frame = +3
Query: 6 LSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHD 185
LSS TQ ++E+DSL GIDF +SITRARFE++NA F++T++PV K L+D+K+ KA +HD
Sbjct: 276 LSSVTQTTVEVDSLSNGIDFSSSITRARFEDINATTFKATIDPVAKVLKDSKVPKADVHD 335
Query: 186 IVLVGGSTRIPKVQKLLQDFFNGRS 260
IVLVGGSTRIPKVQ+L+ DFF+GR+
Sbjct: 336 IVLVGGSTRIPKVQRLVSDFFDGRA 360
Score = 47.2 bits (107), Expect = 2e-06
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = +1
Query: 490 TRSTHPIFEGERAMTKDNNLLGKFELTGIPPAPRG 594
T T P+++GER +N LG+F+LTGIPP PRG
Sbjct: 439 TTVTFPVYQGERVNCAENEPLGEFQLTGIPPMPRG 473
Score = 30.3 bits (65), Expect = 0.23
Identities = 22/83 (26%), Positives = 30/83 (36%), Gaps = 1/83 (1%)
Frame = +2
Query: 254 KELNKSINPDEXXXXXXXXXXXIL-HGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIK 430
+ LNKSINPDE +L + S++ QD G+ G V +
Sbjct: 359 RALNKSINPDEAVAYGAAVQAAVLTNKADSDKTQDLLLLDVVPLSLGVAMEGNVFGVVCP 418
Query: 431 RNXXXXXXXXXXXXXYSDNQPGV 499
RN +DNQ V
Sbjct: 419 RNTPIPTIKKRTFTTVADNQTTV 441
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 107 bits (258), Expect = 1e-24
Identities = 49/90 (54%), Positives = 69/90 (76%)
Frame = +3
Query: 3 TLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIH 182
TLSS IEI+S F G DF +++RA+FEE+N DLF+ T++PVE+ L+D+ + K++I
Sbjct: 303 TLSSQKSVRIEIESFFNGQDFSETLSRAKFEEINMDLFKKTLKPVEQVLKDSNLKKSEID 362
Query: 183 DIVLVGGSTRIPKVQKLLQDFFNGRSSTNL 272
DIVLVGGSTRIPKVQ+LL+ FF ++S +
Sbjct: 363 DIVLVGGSTRIPKVQELLESFFGKKASKGI 392
Score = 64.1 bits (149), Expect = 2e-11
Identities = 26/32 (81%), Positives = 30/32 (93%)
Frame = +1
Query: 508 IFEGERAMTKDNNLLGKFELTGIPPAPRGVPQ 603
++EGER +TKDNNLLGKF+L GIPPAPRGVPQ
Sbjct: 469 VYEGERTLTKDNNLLGKFDLRGIPPAPRGVPQ 500
Score = 43.2 bits (97), Expect = 3e-05
Identities = 29/85 (34%), Positives = 36/85 (42%)
Frame = +2
Query: 254 KELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKR 433
K+ +K INPDE +L G++ + + GIET GGVMT LI R
Sbjct: 386 KKASKGINPDEAVAYGAAVQAGVLSGEEGSD--NIVLLDVIPLTLGIETTGGVMTKLIGR 443
Query: 434 NXXXXXXXXXXXXXYSDNQPGVLIQ 508
N DNQ VLIQ
Sbjct: 444 NTPIPTRKSQIFSTAVDNQNTVLIQ 468
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 67.3 bits (157), Expect = 2e-12
Identities = 31/80 (38%), Positives = 53/80 (66%)
Frame = +3
Query: 6 LSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHD 185
LS++++A I+ L +GIDF ITR+ E L D+ + +EP+ K+L+ A + ++I+
Sbjct: 308 LSANSEAIASIEELADGIDFRLKITRSVLESLCKDMEDAAVEPINKALKKANLTFSEINS 367
Query: 186 IVLVGGSTRIPKVQKLLQDF 245
I+L GG++RIP +Q L D+
Sbjct: 368 IILFGGASRIPFIQSTLADY 387
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 59.7 bits (138), Expect = 3e-10
Identities = 27/81 (33%), Positives = 48/81 (59%)
Frame = +3
Query: 6 LSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHD 185
LS+ T AS +DSL +GIDF++SI R R++ + + V +++ A M+ I +
Sbjct: 298 LSNGTTASAAVDSLADGIDFHSSINRLRYDLAASATLNRMADLVTEAVEKANMEPFDISE 357
Query: 186 IVLVGGSTRIPKVQKLLQDFF 248
++L GG++ PK+ L++ F
Sbjct: 358 VILAGGASNTPKLTSLMESIF 378
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 57.2 bits (132), Expect = 2e-09
Identities = 23/58 (39%), Positives = 44/58 (75%)
Frame = +3
Query: 75 ITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFF 248
I+RA+FE+L L R T++P +++L+DA + ++I++++LVGG TR+P+V + ++ F
Sbjct: 343 ISRAQFEKLVDPLVRRTIDPCKRALKDANLQTSEINEVILVGGMTRMPRVVETVKSIF 400
Score = 50.8 bits (116), Expect = 2e-07
Identities = 19/32 (59%), Positives = 26/32 (81%)
Frame = +1
Query: 508 IFEGERAMTKDNNLLGKFELTGIPPAPRGVPQ 603
+F+GER + +DN L+G F+LTGI PAP+G PQ
Sbjct: 483 VFQGERELVRDNKLIGNFQLTGIAPAPKGQPQ 514
Score = 37.1 bits (82), Expect = 0.002
Identities = 27/85 (31%), Positives = 33/85 (38%)
Frame = +2
Query: 254 KELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKR 433
+E KS+NPDE +L G V+D GIET GGV T LI R
Sbjct: 402 REPAKSVNPDEAVAIGAAIQGGVLSG----HVKDLVLLDVTPLSLGIETLGGVFTRLINR 457
Query: 434 NXXXXXXXXXXXXXYSDNQPGVLIQ 508
N +D Q V I+
Sbjct: 458 NTTIPTRKSQVFSTAADGQTAVEIR 482
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 57.2 bits (132), Expect = 2e-09
Identities = 27/81 (33%), Positives = 48/81 (59%)
Frame = +3
Query: 6 LSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHD 185
LS++ A + ++ + ID + I R+ FEEL L P+EK+L A + K ++
Sbjct: 280 LSANANAPLNVEMIMNDIDASSFIKRSDFEELIKPLLERLTPPIEKALELAGIKKEDLYS 339
Query: 186 IVLVGGSTRIPKVQKLLQDFF 248
I +VGG TR+P V++++ ++F
Sbjct: 340 IEMVGGCTRVPIVKEVIANYF 360
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 26.2 bits (55), Expect = 3.8
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -3
Query: 183 RGFEPYPSWHHGETSPLAP 127
+ +P P+ HG+TSPL+P
Sbjct: 420 KAIKPMPTSIHGQTSPLSP 438
>SPCC584.05 |sec1||SNARE binding protein Sec1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 693
Score = 26.2 bits (55), Expect = 3.8
Identities = 19/79 (24%), Positives = 36/79 (45%)
Frame = -2
Query: 514 QILDEYSGLVIRVGGECLSLFSGDGSVTLDECGHDTSSSLNTEGKGCYIKQQQILHLLRL 335
++ D+YS L + + EC+++F + D S+ N EGK ++L LL
Sbjct: 340 ELRDQYS-LHLTMAQECMNIFEKQQLNLIGAIEQDLSTGSNVEGKVPRSVLSELLPLLDE 398
Query: 334 VTVQDSSLDSCTISYGLVR 278
++S+ + Y + R
Sbjct: 399 GNAEESTKIRLLLLYIIYR 417
>SPCC4G3.18 |||conserved fungal family|Schizosaccharomyces pombe|chr
3|||Manual
Length = 828
Score = 25.8 bits (54), Expect = 5.1
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = -2
Query: 322 DSSLDSCTISYGLVRVNRFVELLPLKKSCRSFCTLGIRVEPPTSTI 185
DS + C S+ + + L L ++ CTL I + PTST+
Sbjct: 472 DSDVMDCCFSFLASILTHSIALPRLLRTKIDLCTLQISLSNPTSTV 517
>SPBC2G2.12 |||histidine-tRNA ligase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 538
Score = 25.8 bits (54), Expect = 5.1
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +3
Query: 42 SLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVG 200
SL G+D+YT I E +A +S+ E +K D + D++ D + VG
Sbjct: 331 SLARGLDYYTGIIYEAVTEASAPKIKSSAE--KKKSADPEADRSN-DDSIGVG 380
>SPCC777.03c |||nifs homolog|Schizosaccharomyces pombe|chr
3|||Manual
Length = 396
Score = 25.8 bits (54), Expect = 5.1
Identities = 10/39 (25%), Positives = 21/39 (53%)
Frame = -2
Query: 301 TISYGLVRVNRFVELLPLKKSCRSFCTLGIRVEPPTSTI 185
T+S G+ R+ F + +PL + + + +PP ++I
Sbjct: 2 TVSEGIARIQAFRKQVPLVEKNENITFFNLSFQPPMNSI 40
>SPAC9.10 |||amino acid permease, unknown 2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 591
Score = 25.4 bits (53), Expect = 6.7
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Frame = +1
Query: 109 ICSGLPWSQ----WRSLSVMPRWIRLKSTILYWW 198
ICS LP + W + S PR+ R S ++ WW
Sbjct: 133 ICSALPAAGSIYLWAAESAGPRFGRFVSFLVAWW 166
>SPBC30D10.14 |||dienelactone hydrolase family|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 249
Score = 25.0 bits (52), Expect = 8.8
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 210 RIPKVQKLLQDFFNGRSSTNL 272
+ P+ QKL DFF+ R S NL
Sbjct: 91 KTPEDQKLCNDFFSTRISPNL 111
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,539,459
Number of Sequences: 5004
Number of extensions: 50513
Number of successful extensions: 172
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 172
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 273658928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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