Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10808
(620 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 138 3e-33
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 136 2e-32
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 132 3e-31
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 117 9e-27
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 77 1e-14
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 67 9e-12
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 9e-12
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 3e-11
SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.011
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_30598| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.43
SB_56121| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_8849| Best HMM Match : F-box (HMM E-Value=0.86) 30 1.7
SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_22339| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_26282| Best HMM Match : Tctex-1 (HMM E-Value=3.1e-14) 29 3.0
SB_53478| Best HMM Match : GASA (HMM E-Value=0.44) 28 5.3
SB_29231| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_31839| Best HMM Match : Exo_endo_phos (HMM E-Value=1.3e-11) 28 5.3
SB_25455| Best HMM Match : DUF948 (HMM E-Value=0.11) 28 5.3
SB_7472| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_54962| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_25894| Best HMM Match : Coatomer_WDAD (HMM E-Value=0) 28 7.0
SB_8228| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 27 9.3
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 138 bits (334), Expect = 3e-33
Identities = 67/87 (77%), Positives = 77/87 (88%), Gaps = 2/87 (2%)
Frame = +3
Query: 3 TLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKM--DKAQ 176
TLSSSTQASIEIDSLFEGIDFYTSITRARFEELN DLF+ T EPVE+++RD+K+ K
Sbjct: 273 TLSSSTQASIEIDSLFEGIDFYTSITRARFEELNQDLFKKTTEPVEQAIRDSKIPGGKES 332
Query: 177 IHDIVLVGGSTRIPKVQKLLQDFFNGR 257
IHDIVLVGGSTRIPK+QK+LQ+ F G+
Sbjct: 333 IHDIVLVGGSTRIPKIQKMLQELFGGK 359
Score = 82.6 bits (195), Expect = 2e-16
Identities = 44/85 (51%), Positives = 47/85 (55%)
Frame = +2
Query: 254 KELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKR 433
KELNKSINPDE ILHGDK + V+D GIETAGGVM+ LIKR
Sbjct: 359 KELNKSINPDEAVAYGAAVQAAILHGDKDDTVKDLLLLDVAPLSMGIETAGGVMSVLIKR 418
Query: 434 NXXXXXXXXXXXXXYSDNQPGVLIQ 508
N YSDNQPGVLIQ
Sbjct: 419 NSTIPTKQTQTFTTYSDNQPGVLIQ 443
Score = 65.3 bits (152), Expect = 4e-11
Identities = 28/32 (87%), Positives = 30/32 (93%)
Frame = +1
Query: 508 IFEGERAMTKDNNLLGKFELTGIPPAPRGVPQ 603
+FEGER+MT NNLLGKFELTGIPPAPRGVPQ
Sbjct: 444 VFEGERSMTAHNNLLGKFELTGIPPAPRGVPQ 475
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 136 bits (328), Expect = 2e-32
Identities = 63/86 (73%), Positives = 80/86 (93%), Gaps = 1/86 (1%)
Frame = +3
Query: 3 TLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMD-KAQI 179
TLSSSTQASIEIDSL++GIDFYTSITRARFEE+NA LF+ T+EPVEK+++D+K++ K +I
Sbjct: 366 TLSSSTQASIEIDSLYDGIDFYTSITRARFEEMNAHLFKKTLEPVEKAIKDSKLESKEKI 425
Query: 180 HDIVLVGGSTRIPKVQKLLQDFFNGR 257
+IV+VGGSTRIPK+Q LLQ+FFNG+
Sbjct: 426 DEIVMVGGSTRIPKIQSLLQNFFNGK 451
Score = 78.6 bits (185), Expect = 4e-15
Identities = 43/85 (50%), Positives = 44/85 (51%)
Frame = +2
Query: 254 KELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKR 433
KELNKSINPDE ILHGDKSE QD G+ETAGGVMT IKR
Sbjct: 451 KELNKSINPDEAVAYGAAVQAAILHGDKSEATQDLLLLDVAPLTLGLETAGGVMTAAIKR 510
Query: 434 NXXXXXXXXXXXXXYSDNQPGVLIQ 508
N YSDNQ VLIQ
Sbjct: 511 NTTIPTKQTQTFTTYSDNQTSVLIQ 535
Score = 66.5 bits (155), Expect = 2e-11
Identities = 27/32 (84%), Positives = 32/32 (100%)
Frame = +1
Query: 508 IFEGERAMTKDNNLLGKFELTGIPPAPRGVPQ 603
++EGER++TKDNNLLGKFEL+GIPPAPRGVPQ
Sbjct: 536 VYEGERSLTKDNNLLGKFELSGIPPAPRGVPQ 567
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 132 bits (318), Expect = 3e-31
Identities = 58/86 (67%), Positives = 77/86 (89%)
Frame = +3
Query: 3 TLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIH 182
TLSSST+ASIE+DSLFEGIDFYT I+RARFE+L +DLF S ++PV K+L DAK K+ IH
Sbjct: 274 TLSSSTEASIEVDSLFEGIDFYTKISRARFEDLCSDLFLSCLDPVNKALSDAKFSKSDIH 333
Query: 183 DIVLVGGSTRIPKVQKLLQDFFNGRS 260
++VLVGGSTR+PK+QK+L+++F+G+S
Sbjct: 334 EVVLVGGSTRVPKIQKMLEEYFSGKS 359
Score = 71.3 bits (167), Expect = 6e-13
Identities = 40/85 (47%), Positives = 44/85 (51%)
Frame = +2
Query: 254 KELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKR 433
K LNKSINPDE IL GDKS+EV+D GIETAG VMT LI+R
Sbjct: 358 KSLNKSINPDEAVAYGAAVQAAILSGDKSDEVKDVLLVDVAPLSLGIETAGEVMTKLIER 417
Query: 434 NXXXXXXXXXXXXXYSDNQPGVLIQ 508
N YSDNQP V I+
Sbjct: 418 NARIPTKATQTFTTYSDNQPAVTIR 442
Score = 62.9 bits (146), Expect = 2e-10
Identities = 26/32 (81%), Positives = 30/32 (93%)
Frame = +1
Query: 508 IFEGERAMTKDNNLLGKFELTGIPPAPRGVPQ 603
+FEGER +TK NNLLGKF+L+GIPPAPRGVPQ
Sbjct: 443 VFEGERPLTKHNNLLGKFDLSGIPPAPRGVPQ 474
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 117 bits (281), Expect = 9e-27
Identities = 54/84 (64%), Positives = 70/84 (83%)
Frame = +3
Query: 6 LSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHD 185
LS+ QA +EI+S FEG DF +TRARFEELNA LF+ST++PV+K L DA + K++IH+
Sbjct: 971 LSTQHQARVEIESFFEGEDFSEMLTRARFEELNAKLFKSTLKPVQKVLEDADLKKSEIHE 1030
Query: 186 IVLVGGSTRIPKVQKLLQDFFNGR 257
IVLVGGSTRIPKVQ+L++DFF G+
Sbjct: 1031 IVLVGGSTRIPKVQQLVKDFFEGK 1054
Score = 62.1 bits (144), Expect = 4e-10
Identities = 27/35 (77%), Positives = 30/35 (85%)
Frame = +1
Query: 499 THPIFEGERAMTKDNNLLGKFELTGIPPAPRGVPQ 603
T +FEGER MTKDN+ LGKF+L GIPPAPRGVPQ
Sbjct: 1134 TIQVFEGERPMTKDNHPLGKFDLNGIPPAPRGVPQ 1168
Score = 43.6 bits (98), Expect = 1e-04
Identities = 29/85 (34%), Positives = 36/85 (42%)
Frame = +2
Query: 254 KELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKR 433
KE ++ INPDE +L G+ E+ + GIET GGVMT LI R
Sbjct: 1054 KEPSRGINPDEAVAYGAAVQAGVLGGE--EDTGEVVLLDVNPLTLGIETVGGVMTKLISR 1111
Query: 434 NXXXXXXXXXXXXXYSDNQPGVLIQ 508
N +DNQ V IQ
Sbjct: 1112 NTVIPTKKSQVFSTAADNQNTVTIQ 1136
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 77.0 bits (181), Expect = 1e-14
Identities = 32/88 (36%), Positives = 60/88 (68%), Gaps = 3/88 (3%)
Frame = +3
Query: 3 TLSSSTQASIEIDSLFEG---IDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKA 173
T ++ + + SL EG + F +I+R FE +N DLF+ ++P+ + L + ++ K
Sbjct: 303 TRTNEVTIKLMLPSLSEGKKIVKFKETISRKMFETINEDLFKKVLQPIRRVLAEVELPKE 362
Query: 174 QIHDIVLVGGSTRIPKVQKLLQDFFNGR 257
++ ++VLVGGSTR+PK+++L+Q+FF+G+
Sbjct: 363 EVDEVVLVGGSTRVPKIRQLIQEFFDGK 390
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 67.3 bits (157), Expect = 9e-12
Identities = 29/58 (50%), Positives = 45/58 (77%)
Frame = +3
Query: 75 ITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFF 248
++R++FE L ADL T+ P +K L+DA+++K +I D++LVGG TR+PKVQ+ +QD F
Sbjct: 53 LSRSKFESLVADLINRTVGPCKKCLQDAEINKGEIGDVLLVGGMTRMPKVQQTVQDIF 110
Score = 36.3 bits (80), Expect = 0.020
Identities = 22/58 (37%), Positives = 27/58 (46%)
Frame = +2
Query: 263 NKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRN 436
+K++NPDE +L GD V+D GIET GGV T LI RN
Sbjct: 115 SKAVNPDEAVAIGAAIQGGVLAGD----VKDVLLLDVTPLSLGIETLGGVFTKLITRN 168
Score = 31.1 bits (67), Expect = 0.75
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +1
Query: 508 IFEGERAMTKDNNLLGKFEL 567
+F+GER M DN LLG+F+L
Sbjct: 193 VFQGEREMAIDNKLLGQFQL 212
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 67.3 bits (157), Expect = 9e-12
Identities = 29/58 (50%), Positives = 45/58 (77%)
Frame = +3
Query: 75 ITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFF 248
++R++FE L ADL T+ P +K L+DA+++K +I D++LVGG TR+PKVQ+ +QD F
Sbjct: 108 LSRSKFESLVADLINRTVGPCKKCLQDAEINKGEIGDVLLVGGMTRMPKVQQTVQDIF 165
Score = 56.0 bits (129), Expect = 2e-08
Identities = 23/32 (71%), Positives = 27/32 (84%)
Frame = +1
Query: 508 IFEGERAMTKDNNLLGKFELTGIPPAPRGVPQ 603
+F+GER M DN LLG+F+L GIPPAPRGVPQ
Sbjct: 248 VFQGEREMAIDNKLLGQFQLVGIPPAPRGVPQ 279
Score = 36.3 bits (80), Expect = 0.020
Identities = 22/58 (37%), Positives = 27/58 (46%)
Frame = +2
Query: 263 NKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRN 436
+K++NPDE +L GD V+D GIET GGV T LI RN
Sbjct: 170 SKAVNPDEAVAIGAAIQGGVLAGD----VKDVLLLDVTPLSLGIETLGGVFTKLITRN 223
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 65.7 bits (153), Expect = 3e-11
Identities = 31/77 (40%), Positives = 45/77 (58%)
Frame = +3
Query: 6 LSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHD 185
LS++ + +I+ +F+G DF +TR EE+ DLF PV ++L+ A M I
Sbjct: 258 LSANNEIFAQIEGVFDGKDFRVKVTREELEEMCQDLFDRVAGPVNRALKSASMTMNDIDS 317
Query: 186 IVLVGGSTRIPKVQKLL 236
+VLVGG R+PKVQ L
Sbjct: 318 VVLVGGGIRVPKVQDAL 334
>SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 37.1 bits (82), Expect = 0.011
Identities = 13/32 (40%), Positives = 26/32 (81%)
Frame = +3
Query: 162 MDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGR 257
+ ++ + ++LVGG+TR PK+Q+LL+++F G+
Sbjct: 35 LKQSSMIQVILVGGATRTPKIQQLLKNYFVGK 66
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 33.5 bits (73), Expect = 0.14
Identities = 18/61 (29%), Positives = 34/61 (55%)
Frame = +3
Query: 9 SSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDI 188
+++++ I I+ E D + + RA+FEEL ADL + P+ +L A+ K + ++
Sbjct: 336 ANTSEIPINIECFMEDKDVHGRMKRAQFEELAADLLKLVEAPLRSAL--AQSGKYSVKNV 393
Query: 189 V 191
V
Sbjct: 394 V 394
>SB_30598| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 809
Score = 31.9 bits (69), Expect = 0.43
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Frame = +3
Query: 81 RARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIP-----KVQKLLQDF 245
+ +E+L+ADL + P+ +L+D D I L+ + I KVQ+LL
Sbjct: 390 QTEWEDLSADLLPLVLNPIISALQDDDDDVRAIAASALLPIAESIVQLAPNKVQELLMTL 449
Query: 246 FNGRSSTNLLTLTRP*LMVQLSRLLSCTVTSL 341
+N + LT + +M+ L+ +L+C S+
Sbjct: 450 WNTLVELDDLTASTNSIMLLLAGILACPSVSM 481
>SB_56121| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 553
Score = 30.3 bits (65), Expect = 1.3
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Frame = +1
Query: 94 RS*TPICSGLPW--SQWRSLSVMPRWIRL--KSTILY--WWVAPLVSPRCRSSCKI-SLM 252
RS P+ S P ++R L ++PRW + KST+L+ V P S R RS + SL
Sbjct: 221 RSSPPVASLDPGVRQEYRPLHMLPRWTLVYGKSTVLFTSCLVGPWCSARVRSPPPVASLD 280
Query: 253 EGAQQIY*P 279
G +Q Y P
Sbjct: 281 PGVRQEYGP 289
Score = 29.5 bits (63), Expect = 2.3
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Frame = +1
Query: 94 RS*TPICSGLPW--SQWRSLSVMPRWIRL--KSTILY--WWVAPLVSPRCRSSCKI-SLM 252
RS P+ S P ++ L ++PRW + KST+L+ V P S R RSS + SL
Sbjct: 371 RSSPPVASLDPGVRQEYGPLHLLPRWTLVYGKSTVLFTSCLVGPWCSARVRSSPPVASLD 430
Query: 253 EGAQQIY*P 279
G +Q Y P
Sbjct: 431 PGVRQEYGP 439
>SB_8849| Best HMM Match : F-box (HMM E-Value=0.86)
Length = 1222
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/45 (33%), Positives = 29/45 (64%)
Frame = -2
Query: 445 DGSVTLDECGHDTSSSLNTEGKGCYIKQQQILHLLRLVTVQDSSL 311
DG+V LDE + +++SL++ G C + ++ + + TV++SSL
Sbjct: 1160 DGAVLLDEWNYGSNASLSSCGSTC--SESRLSYFIGQDTVEESSL 1202
>SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 87
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +3
Query: 174 QIHDIVLVGGSTRIPKVQKLLQDFFNGRSSTNL 272
+I + +VGGSTRIP ++ ++++ F T +
Sbjct: 6 EIDSVEIVGGSTRIPAIKDIIKNVFGKELMTTM 38
>SB_22339| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 29.5 bits (63), Expect = 2.3
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Frame = +1
Query: 94 RS*TPICSGLPW--SQWRSLSVMPRWIRL--KSTILY--WWVAPLVSPRCRSSCKI-SLM 252
RS P+ S P ++ L ++PRW + KST+L+ V P S R RSS + SL
Sbjct: 103 RSSPPVASLDPGVRQEYGPLHLLPRWTLVYGKSTVLFTSCLVGPWCSARVRSSPPVASLD 162
Query: 253 EGAQQIY*P 279
G +Q Y P
Sbjct: 163 PGVRQEYGP 171
>SB_26282| Best HMM Match : Tctex-1 (HMM E-Value=3.1e-14)
Length = 273
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = -2
Query: 391 TEGKGCYIKQQQILHLLRLVTVQDSSLDSCTISYGLVRVNRFVELLPLK 245
T G I+QQQ LRLVT Q + ++ + L ++ FV LL K
Sbjct: 9 TAGAAVAIEQQQDSAYLRLVTPQRTETETYVVLCNLRQLQTFVSLLIAK 57
>SB_53478| Best HMM Match : GASA (HMM E-Value=0.44)
Length = 136
Score = 28.3 bits (60), Expect = 5.3
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -2
Query: 454 FSGDGSVTLDECGHDTSSSLNTEGKGCYI----KQQQILHLLRLVTVQDSSLDSCTISYG 287
F DG V DE G DT + K + K ++ ++ L+ +Q ++ C YG
Sbjct: 13 FDNDGDV--DENGDDTEDDDDDYKKILMVTMMMKMLLMMMIMMLMIIQITNPKKCRARYG 70
Query: 286 LVRVNRFVELLPLKKSCRSF 227
L R + + + KK C F
Sbjct: 71 LDRQHEWCKPCRRKKKCVRF 90
>SB_29231| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2271
Score = 28.3 bits (60), Expect = 5.3
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 535 KDNNLLGKFELTGIPPAPRGVPQN 606
+D NL+G +L + P G+P+N
Sbjct: 1538 QDRNLMGNIQLDPVEPGAEGIPEN 1561
>SB_31839| Best HMM Match : Exo_endo_phos (HMM E-Value=1.3e-11)
Length = 887
Score = 28.3 bits (60), Expect = 5.3
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 535 KDNNLLGKFELTGIPPAPRGVPQN 606
+D NL+G +L + P G+P+N
Sbjct: 198 QDRNLMGNIQLDPVEPGAEGIPEN 221
>SB_25455| Best HMM Match : DUF948 (HMM E-Value=0.11)
Length = 260
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +3
Query: 36 IDSLFEGIDFYTSITRARFEELNAD--LFRSTMEPVEKSLRD 155
+DSL +DF T+ T A F +LN R T+ + SL +
Sbjct: 168 LDSLAVRVDFTTNTTNALFTQLNTTDAAIRDTLSQINSSLSE 209
>SB_7472| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 148
Score = 27.9 bits (59), Expect = 7.0
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 535 KDNNLLGKFELTGIPPAPRGVPQN 606
+D NL+G +L + P G+P+N
Sbjct: 50 QDRNLMGNIKLDPVEPGAEGIPEN 73
>SB_54962| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2211
Score = 27.9 bits (59), Expect = 7.0
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +1
Query: 538 DNNLLGKFELTGIPPAPRGVPQN 606
D NL+G +L + P G+P+N
Sbjct: 178 DRNLMGNIQLDPVEPGAEGIPEN 200
>SB_25894| Best HMM Match : Coatomer_WDAD (HMM E-Value=0)
Length = 1066
Score = 27.9 bits (59), Expect = 7.0
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3
Query: 438 LPSPLNRLRHSPPTLITNP 494
LP N + H+PPT + NP
Sbjct: 760 LPDTANEIEHAPPTTVINP 778
>SB_8228| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 280
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/58 (22%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 69 TSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGG-STRIPKVQKLLQ 239
T ++ARF++ DL T++P+ ++++ D + +++ G R+ + L+Q
Sbjct: 176 TEHSKARFKQQLTDLVIHTLQPIRENIQSLSKDPGLVSNVLETGAEKARLLAEETLVQ 233
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 6 LSSSTQASIEIDSLFEGIDFYTSITR 83
LS+ A+ +DSL EGIDF ++R
Sbjct: 240 LSTLESANCSVDSLCEGIDFQGQVSR 265
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,810,116
Number of Sequences: 59808
Number of extensions: 421081
Number of successful extensions: 3391
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 3289
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3389
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1536271375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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