Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10807X
(401 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 107 2e-24
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 107 2e-24
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 107 3e-24
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 107 3e-24
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 107 3e-24
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 107 3e-24
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 105 1e-23
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 105 1e-23
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 105 1e-23
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 98 2e-21
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 84 4e-17
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 82 2e-16
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 58 2e-09
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 57 4e-09
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 57 5e-09
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 48 3e-06
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 43 9e-05
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 33 0.094
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 30 0.50
At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identica... 29 1.2
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 28 2.0
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 28 2.7
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 3.5
At3g54140.1 68416.m05985 proton-dependent oligopeptide transport... 27 4.7
At4g36790.1 68417.m05219 transporter-related low similarity to s... 27 6.2
At5g65410.1 68418.m08226 zinc finger homeobox family protein / Z... 26 8.2
At5g01400.1 68418.m00053 expressed protein contains low similari... 26 8.2
At4g10350.1 68417.m01700 no apical meristem (NAM) family protein... 26 8.2
At3g48860.2 68416.m05337 expressed protein 26 8.2
At3g48860.1 68416.m05336 expressed protein 26 8.2
At3g07870.1 68416.m00962 F-box family protein contains F-box dom... 26 8.2
At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin ... 26 8.2
At2g41370.1 68415.m05106 ankyrin repeat family protein / BTB/POZ... 26 8.2
At2g21330.1 68415.m02538 fructose-bisphosphate aldolase, putativ... 26 8.2
At1g60060.1 68414.m06766 expressed protein 26 8.2
At1g43245.1 68414.m04985 expressed protein 26 8.2
At1g16690.2 68414.m01999 transcription factor-related similar to... 26 8.2
At1g16690.1 68414.m01998 transcription factor-related similar to... 26 8.2
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 107 bits (258), Expect = 2e-24
Identities = 45/49 (91%), Positives = 49/49 (100%)
Frame = +3
Query: 255 GIGQKDSYVGDEAQSKRGILTLKYPIEHGIVTSWDDMEKIWHHTFYNEL 401
G+GQKD+YVGDEAQSKRGILTLKYPIEHGIV++WDDMEKIWHHTFYNEL
Sbjct: 48 GMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNEL 96
Score = 78.6 bits (185), Expect = 1e-15
Identities = 35/43 (81%), Positives = 38/43 (88%)
Frame = +1
Query: 127 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 255
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMV 47
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 107 bits (258), Expect = 2e-24
Identities = 45/49 (91%), Positives = 49/49 (100%)
Frame = +3
Query: 255 GIGQKDSYVGDEAQSKRGILTLKYPIEHGIVTSWDDMEKIWHHTFYNEL 401
G+GQKD+YVGDEAQSKRGILTLKYPIEHGIV++WDDMEKIWHHTFYNEL
Sbjct: 48 GMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNEL 96
Score = 78.6 bits (185), Expect = 1e-15
Identities = 35/43 (81%), Positives = 38/43 (88%)
Frame = +1
Query: 127 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 255
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMV 47
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 107 bits (257), Expect = 3e-24
Identities = 45/49 (91%), Positives = 48/49 (97%)
Frame = +3
Query: 255 GIGQKDSYVGDEAQSKRGILTLKYPIEHGIVTSWDDMEKIWHHTFYNEL 401
G+GQKD+YVGDEAQSKRGILTLKYPIEHGIV +WDDMEKIWHHTFYNEL
Sbjct: 48 GMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNEL 96
Score = 78.6 bits (185), Expect = 1e-15
Identities = 35/43 (81%), Positives = 38/43 (88%)
Frame = +1
Query: 127 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 255
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMV 47
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 107 bits (257), Expect = 3e-24
Identities = 45/49 (91%), Positives = 48/49 (97%)
Frame = +3
Query: 255 GIGQKDSYVGDEAQSKRGILTLKYPIEHGIVTSWDDMEKIWHHTFYNEL 401
G+GQKD+YVGDEAQSKRGILTLKYPIEHGIV +WDDMEKIWHHTFYNEL
Sbjct: 48 GMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNEL 96
Score = 78.6 bits (185), Expect = 1e-15
Identities = 35/43 (81%), Positives = 38/43 (88%)
Frame = +1
Query: 127 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 255
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMV 47
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 107 bits (257), Expect = 3e-24
Identities = 45/49 (91%), Positives = 48/49 (97%)
Frame = +3
Query: 255 GIGQKDSYVGDEAQSKRGILTLKYPIEHGIVTSWDDMEKIWHHTFYNEL 401
G+GQKD+YVGDEAQSKRGILTLKYPIEHGIV +WDDMEKIWHHTFYNEL
Sbjct: 48 GMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNEL 96
Score = 78.6 bits (185), Expect = 1e-15
Identities = 35/43 (81%), Positives = 38/43 (88%)
Frame = +1
Query: 127 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 255
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMV 47
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 107 bits (257), Expect = 3e-24
Identities = 45/49 (91%), Positives = 48/49 (97%)
Frame = +3
Query: 255 GIGQKDSYVGDEAQSKRGILTLKYPIEHGIVTSWDDMEKIWHHTFYNEL 401
G+GQKD+YVGDEAQSKRGILTLKYPIEHGIV +WDDMEKIWHHTFYNEL
Sbjct: 48 GMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNEL 96
Score = 78.6 bits (185), Expect = 1e-15
Identities = 35/43 (81%), Positives = 38/43 (88%)
Frame = +1
Query: 127 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 255
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMV 47
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 105 bits (251), Expect = 1e-23
Identities = 43/49 (87%), Positives = 48/49 (97%)
Frame = +3
Query: 255 GIGQKDSYVGDEAQSKRGILTLKYPIEHGIVTSWDDMEKIWHHTFYNEL 401
G+ QKD+YVGDEAQSKRGILTLKYPIEHG+V++WDDMEKIWHHTFYNEL
Sbjct: 48 GMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNEL 96
Score = 76.6 bits (180), Expect = 6e-15
Identities = 32/43 (74%), Positives = 38/43 (88%)
Frame = +1
Query: 127 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 255
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMV
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMV 47
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 105 bits (251), Expect = 1e-23
Identities = 43/49 (87%), Positives = 48/49 (97%)
Frame = +3
Query: 255 GIGQKDSYVGDEAQSKRGILTLKYPIEHGIVTSWDDMEKIWHHTFYNEL 401
G+ QKD+YVGDEAQSKRGILTLKYPIEHG+V++WDDMEKIWHHTFYNEL
Sbjct: 48 GMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNEL 96
Score = 76.6 bits (180), Expect = 6e-15
Identities = 32/43 (74%), Positives = 38/43 (88%)
Frame = +1
Query: 127 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 255
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMV
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMV 47
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 105 bits (251), Expect = 1e-23
Identities = 43/49 (87%), Positives = 48/49 (97%)
Frame = +3
Query: 255 GIGQKDSYVGDEAQSKRGILTLKYPIEHGIVTSWDDMEKIWHHTFYNEL 401
G+ QKD+YVGDEAQSKRGILTLKYPIEHG+V++WDDMEKIWHHTFYNEL
Sbjct: 48 GMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNEL 96
Score = 76.6 bits (180), Expect = 6e-15
Identities = 32/43 (74%), Positives = 38/43 (88%)
Frame = +1
Query: 127 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 255
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMV
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMV 47
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 97.9 bits (233), Expect = 2e-21
Identities = 38/49 (77%), Positives = 48/49 (97%)
Frame = +3
Query: 255 GIGQKDSYVGDEAQSKRGILTLKYPIEHGIVTSWDDMEKIWHHTFYNEL 401
G+ +KD++VGDEAQ++RGIL+LKYPIEHG+V++WDDMEKIWHHTFYNEL
Sbjct: 49 GMDEKDTFVGDEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNEL 97
Score = 79.0 bits (186), Expect = 1e-15
Identities = 35/48 (72%), Positives = 41/48 (85%)
Frame = +1
Query: 127 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVV*DRR 270
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMV D +
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEK 53
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 83.8 bits (198), Expect = 4e-17
Identities = 31/49 (63%), Positives = 44/49 (89%)
Frame = +3
Query: 255 GIGQKDSYVGDEAQSKRGILTLKYPIEHGIVTSWDDMEKIWHHTFYNEL 401
G+ + D +VGD+A+++ GILTL YP+EHG+V++WDDMEKIW+HTFY+EL
Sbjct: 3 GMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSEL 51
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 81.8 bits (193), Expect = 2e-16
Identities = 33/49 (67%), Positives = 40/49 (81%)
Frame = +3
Query: 255 GIGQKDSYVGDEAQSKRGILTLKYPIEHGIVTSWDDMEKIWHHTFYNEL 401
G+ +SYVG+E + R ILTLK P+EHGIV +WDDMEKIWH+TFYNEL
Sbjct: 37 GLNPNESYVGEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNEL 85
Score = 52.4 bits (120), Expect = 1e-07
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = +1
Query: 142 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 237
+V D G GM +AGFAGD+AP+ VFP +VGRPR
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPR 35
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 58.4 bits (135), Expect = 2e-09
Identities = 23/45 (51%), Positives = 29/45 (64%)
Frame = +3
Query: 267 KDSYVGDEAQSKRGILTLKYPIEHGIVTSWDDMEKIWHHTFYNEL 401
KD VG+ R L + YP+ +GIV +WDDME +W H FYNEL
Sbjct: 51 KDIVVGETCSELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNEL 95
Score = 45.6 bits (103), Expect = 1e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +1
Query: 142 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 234
+V DNG+G K GFAG++ P +VFP +VGRP
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRP 37
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 57.2 bits (132), Expect = 4e-09
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +1
Query: 127 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 228
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
Score = 39.5 bits (88), Expect = 8e-04
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +3
Query: 261 GQKDSYVGDEAQS-KRGILTLKYPIEHGIVTSWDDMEKIWHHTFYN 395
G++ Y G +A + +R + + P + GIVT WD ++ +W H F N
Sbjct: 65 GKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRN 110
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 56.8 bits (131), Expect = 5e-09
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +1
Query: 127 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 228
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
Score = 39.5 bits (88), Expect = 8e-04
Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +3
Query: 276 YVGDEAQS-KRGILTLKYPIEHGIVTSWDDMEKIWHHTF 389
YVG +A S +R + + PI+ GIV+ WD ++ IW H F
Sbjct: 76 YVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAF 114
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 47.6 bits (108), Expect = 3e-06
Identities = 24/47 (51%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = +3
Query: 270 DSYVGDEAQSK-RGILT--LKYPIEHGIVTSWDDMEKIWHHTFYNEL 401
D Y+GDEA +K R T L YPIEHG V WD ME+ W +N L
Sbjct: 67 DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYL 113
Score = 35.9 bits (79), Expect = 0.010
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +1
Query: 139 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 225
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 42.7 bits (96), Expect = 9e-05
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +1
Query: 142 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 243
+V+DNG+ + G+AG+ PR VF +IV RPRH+
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHK 55
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 32.7 bits (71), Expect = 0.094
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 142 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 234
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 30.3 bits (65), Expect = 0.50
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = -1
Query: 236 RGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 126
RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 298 RGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identical
to gi|3883122|gb|AAC77824; supported by cDNA
gi|3883121|gb|AF082299
Length = 131
Score = 29.1 bits (62), Expect = 1.2
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -1
Query: 257 TTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATS 129
TT+TP LP + T +SP P ++ P P TT+ TS
Sbjct: 29 TTVTPPPTALPPVTAETPSPIASPPVP-VNEPTPAPTTSPTTS 70
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 28.3 bits (60), Expect = 2.0
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 327 PIEHGIVTSWDDMEKIWHHTFYNEL 401
PIE G++ WD ME + + Y L
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGL 81
Score = 27.5 bits (58), Expect = 3.5
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 139 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 231
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 27.9 bits (59), Expect = 2.7
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -2
Query: 373 IFSMSSQLVTIPCSMGYLRVRIPLLLCASS 284
IFS SS+LVT P S+ +R R ++L SS
Sbjct: 10 IFSSSSRLVTTPSSVFPIRQRRRIILVTSS 39
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 3.5
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -1
Query: 239 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 117
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At3g54140.1 68416.m05985 proton-dependent oligopeptide transport
(POT) family protein contains Pfam profile: PF00854 POT
family
Length = 570
Score = 27.1 bits (57), Expect = 4.7
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = -1
Query: 374 NLLHVIPASDDSVFDGVFEGQDTSFALCLISYIRVLLSYTTITP*W 237
NL A+ +S D + +G+ + LC ++ + L S T+ P W
Sbjct: 291 NLKFFDKAAVESQSDSIKDGEVNPWRLCSVTQVEELKSIITLLPVW 336
>At4g36790.1 68417.m05219 transporter-related low similarity to
spinster membrane proteins from [Drosophila
melanogaster] GI:12003976, GI:12003972, GI:12003974,
GI:12003970; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 489
Score = 26.6 bits (56), Expect = 6.2
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -1
Query: 335 FDGVFEGQDTSFALCLISYI-RVLLSYTTITP*WRGLPTIEGNTARGASSPAKPAL 171
FD FEG +SFA L+ + L Y + RG+ ++G++ R A + +K L
Sbjct: 400 FDRAFEGSFSSFAAPLVGILSEKLFGYDS-----RGIDPLKGSSVREADALSKGLL 450
>At5g65410.1 68418.m08226 zinc finger homeobox family protein /
ZF-HD homeobox family protein similar to hypothetical
proteins (GP|4220524)(GP|3184285|)(Arabidopsis); ZP-HD
homeobox family protein GP|13374061 (Flaveria
bidentis);GP:5091602 {Oryza sativa}
Length = 279
Score = 26.2 bits (55), Expect = 8.2
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -3
Query: 288 HLLHKSPSVLYHHHALMAGPSNDRGEH 208
H L KSPS L+HH A P H
Sbjct: 248 HTLGKSPSPLHHHQAPPPPPPQSSFHH 274
>At5g01400.1 68418.m00053 expressed protein contains low similarity to
symplekin SP:Q92797 from [Homo sapiens]
Length = 1467
Score = 26.2 bits (55), Expect = 8.2
Identities = 15/56 (26%), Positives = 23/56 (41%)
Frame = -1
Query: 293 CLISYIRVLLSYTTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 126
CL Y + I R + + N + AS P K A+H+ P+ +SS
Sbjct: 930 CLSLYFALCTKVLRIFTILRLMTNLVFNIYKNASDPVKQAIHLQIPILVRTMGSSS 985
>At4g10350.1 68417.m01700 no apical meristem (NAM) family protein
contains Pfam PF02365: No apical meristem (NAM) domain;
nap gene, Arabidopsis thaliana, gb:AJ222713
Length = 341
Score = 26.2 bits (55), Expect = 8.2
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = -3
Query: 291 PHLLHKSPSVLYHHHALMAGPSNDRGEHGARSIISCETGL 172
P + HK PS+ + + + +A S G + +CE GL
Sbjct: 227 PPIFHKPPSLGFDYSSGLARDSESAASEGLQYQQACEPGL 266
>At3g48860.2 68416.m05337 expressed protein
Length = 577
Score = 26.2 bits (55), Expect = 8.2
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -1
Query: 218 EGNTARGASSPAKPALHIPEPLSTTNAATSSSH 120
E + R AS+ KPA H P +S+T + +S+ +
Sbjct: 82 EDLSLRFASASLKPARHAPSSISSTGSNSSNGN 114
>At3g48860.1 68416.m05336 expressed protein
Length = 494
Score = 26.2 bits (55), Expect = 8.2
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -1
Query: 218 EGNTARGASSPAKPALHIPEPLSTTNAATSSSH 120
E + R AS+ KPA H P +S+T + +S+ +
Sbjct: 82 EDLSLRFASASLKPARHAPSSISSTGSNSSNGN 114
>At3g07870.1 68416.m00962 F-box family protein contains F-box domain
Pfam:PF00646
Length = 417
Score = 26.2 bits (55), Expect = 8.2
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -1
Query: 239 WRGLPTIEGNTARGASSPAKPA--LHIPEPL 153
WR + T G + +SSP KP LH P+
Sbjct: 55 WRSVLTQHGRLSSSSSSPTKPCLLLHCDSPI 85
>At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin
family protein / PAN domain-containing protein contains
Pfam profiles: PF01453 lectin (probable mannose
binding), PF00024 PAN domain
Length = 764
Score = 26.2 bits (55), Expect = 8.2
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 127 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM 252
E++ A + + G G+C A +D + V I GR +GV+
Sbjct: 632 EDLEAKLTEYGFGLCAADKDVEDFGKTVLALITGRYEPEGVV 673
>At2g41370.1 68415.m05106 ankyrin repeat family protein / BTB/POZ
domain-containing protein contains Pfam domain, PF00023:
Ankyrin repeat and Pfam domain, PF00651: BTB/POZ domain
Length = 491
Score = 26.2 bits (55), Expect = 8.2
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3
Query: 288 HLLHKSPSVLYHHH 247
H H+ PS +YHHH
Sbjct: 473 HHHHQDPSTMYHHH 486
>At2g21330.1 68415.m02538 fructose-bisphosphate aldolase, putative
strong similarity to plastidic fructose-bisphosphate
aldolase (EC 4.1.2.13) from Nicotiana paniculata
(NPALDP1) [GI:4827251], Oryza sativa, PIR2:T02057
[SP|Q40677]
Length = 399
Score = 26.2 bits (55), Expect = 8.2
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 333 EHGIVTSWDDMEKIWHHTFY 392
EHGI ++D EK+W F+
Sbjct: 234 EHGIDRTYDVAEKVWAEVFF 253
>At1g60060.1 68414.m06766 expressed protein
Length = 386
Score = 26.2 bits (55), Expect = 8.2
Identities = 12/19 (63%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
Frame = -2
Query: 256 PPSRPDG-GAFQRSRGTRR 203
PP + DG GA+ RSRG RR
Sbjct: 43 PPPKWDGQGAYDRSRGNRR 61
>At1g43245.1 68414.m04985 expressed protein
Length = 558
Score = 26.2 bits (55), Expect = 8.2
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 279 HKSPSVLYHHHALMAGPSNDRGEHGARSIIS 187
H+ ++L +HH LMA PS H A + I+
Sbjct: 99 HRLNNLLTNHHLLMADPSISVAIHHAANFIA 129
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 26.2 bits (55), Expect = 8.2
Identities = 11/39 (28%), Positives = 17/39 (43%)
Frame = +3
Query: 285 DEAQSKRGILTLKYPIEHGIVTSWDDMEKIWHHTFYNEL 401
D A L++KY + H I + W + +IW L
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRL 207
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 26.2 bits (55), Expect = 8.2
Identities = 11/39 (28%), Positives = 17/39 (43%)
Frame = +3
Query: 285 DEAQSKRGILTLKYPIEHGIVTSWDDMEKIWHHTFYNEL 401
D A L++KY + H I + W + +IW L
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRL 207
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,311,431
Number of Sequences: 28952
Number of extensions: 193747
Number of successful extensions: 535
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 535
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 585758608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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