Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10805
(620 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P23396 Cluster: 40S ribosomal protein S3; n=174; Eukary... 200 2e-50
UniRef50_Q8SQM3 Cluster: 40S ribosomal protein S3; n=1; Encephal... 117 2e-25
UniRef50_A2DIM3 Cluster: Ribosomal protein S3, putative; n=1; Tr... 116 5e-25
UniRef50_Q59N00 Cluster: Likely cytosolic ribosomal protein S3; ... 116 5e-25
UniRef50_Q38EW1 Cluster: 40S ribosomal protein S3, putative; n=4... 115 1e-24
UniRef50_A7NTL0 Cluster: Chromosome chr18 scaffold_1, whole geno... 114 2e-24
UniRef50_Q22AV9 Cluster: KH domain containing protein; n=3; Olig... 110 2e-23
UniRef50_Q01BA3 Cluster: Putative ribosomal protein; n=1; Ostreo... 110 3e-23
UniRef50_UPI00005A35DE Cluster: PREDICTED: similar to 40S riboso... 94 2e-18
UniRef50_A7NXL1 Cluster: Chromosome chr5 scaffold_2, whole genom... 87 3e-16
UniRef50_Q7QNT9 Cluster: GLP_157_11435_12088; n=1; Giardia lambl... 80 5e-14
UniRef50_A7NXL5 Cluster: Chromosome chr5 scaffold_2, whole genom... 69 7e-11
UniRef50_A5ATU8 Cluster: Putative uncharacterized protein; n=1; ... 66 5e-10
UniRef50_Q8TRU1 Cluster: 30S ribosomal protein S3P; n=8; Euryarc... 66 5e-10
UniRef50_A7QEK7 Cluster: Chromosome chr17 scaffold_85, whole gen... 66 6e-10
UniRef50_Q8U004 Cluster: 30S ribosomal protein S3P; n=5; Euryarc... 66 6e-10
UniRef50_O28360 Cluster: 30S ribosomal protein S3P; n=1; Archaeo... 66 6e-10
UniRef50_P20281 Cluster: 30S ribosomal protein S3P; n=5; Halobac... 66 8e-10
UniRef50_A6R2L3 Cluster: Predicted protein; n=1; Ajellomyces cap... 65 1e-09
UniRef50_Q8LNX7 Cluster: Putative ribosomal protein S3; n=1; Zin... 64 2e-09
UniRef50_A3CT03 Cluster: 30S ribosomal protein S3P; n=4; Archaea... 64 3e-09
UniRef50_Q8TX35 Cluster: 30S ribosomal protein S3P; n=1; Methano... 62 8e-09
UniRef50_Q6LXE7 Cluster: 30S ribosomal protein S3P; n=5; Methano... 62 1e-08
UniRef50_O26116 Cluster: 30S ribosomal protein S3P; n=3; Methano... 59 1e-07
UniRef50_UPI00015BB204 Cluster: SSU ribosomal protein S3P; n=1; ... 58 1e-07
UniRef50_A1RXG6 Cluster: 30S ribosomal protein S3P; n=2; Thermof... 57 3e-07
UniRef50_Q9UXA0 Cluster: 30S ribosomal protein S3P; n=2; Thermop... 57 3e-07
UniRef50_Q4JB46 Cluster: 30S ribosomal protein S3P; n=3; Sulfolo... 54 3e-06
UniRef50_A5B260 Cluster: Putative uncharacterized protein; n=1; ... 53 5e-06
UniRef50_A0RVX9 Cluster: 30S ribosomal protein S3P; n=2; Thermop... 52 8e-06
UniRef50_Q3LWD3 Cluster: Ribosomal protein S3; n=1; Bigelowiella... 51 3e-05
UniRef50_Q9HIR5 Cluster: 30S ribosomal protein S3P; n=4; Thermop... 48 1e-04
UniRef50_A3DNB3 Cluster: 30S ribosomal protein S3P; n=1; Staphyl... 48 1e-04
UniRef50_Q673S3 Cluster: Ribosomal protein S3; n=2; environmenta... 45 0.001
UniRef50_Q8ZWI0 Cluster: 30S ribosomal protein S3P; n=6; Pyrobac... 45 0.001
UniRef50_A3H696 Cluster: Ribosomal protein S3-like; n=1; Caldivi... 44 0.002
UniRef50_Q74MZ4 Cluster: 30S ribosomal protein S3P; n=2; Nanoarc... 42 0.016
UniRef50_Q9RXJ6 Cluster: 30S ribosomal protein S3; n=2; Deinococ... 38 0.15
UniRef50_A5DF25 Cluster: Putative uncharacterized protein; n=1; ... 38 0.19
UniRef50_Q7MTL9 Cluster: 30S ribosomal protein S3; n=19; Bactero... 38 0.26
UniRef50_Q52188 Cluster: TraC precursor; n=9; root|Rep: TraC pre... 36 1.0
UniRef50_UPI0000DA2268 Cluster: PREDICTED: hypothetical protein;... 34 2.4
UniRef50_Q6KI49 Cluster: 30S ribosomal protein S3; n=9; Mycoplas... 34 3.1
UniRef50_Q9XDW7 Cluster: PsbAa; n=1; Rhodopseudomonas palustris|... 29 4.8
UniRef50_Q3EBB8 Cluster: Uncharacterized protein At3g06190.2; n=... 33 5.5
UniRef50_UPI0000F1F8B1 Cluster: PREDICTED: hypothetical protein;... 33 7.3
UniRef50_A6EHQ8 Cluster: 30S ribosomal protein S3; n=1; Pedobact... 33 7.3
UniRef50_Q5SCB4 Cluster: Cyclin H; n=2; Ostreococcus|Rep: Cyclin... 33 7.3
UniRef50_Q9VWU0 Cluster: CG15046-PA; n=2; Sophophora|Rep: CG1504... 33 7.3
UniRef50_Q5XIY2 Cluster: Transmembrane protein 56; n=8; Euteleos... 33 7.3
UniRef50_Q04G79 Cluster: 30S ribosomal protein S3; n=1; Oenococc... 33 7.3
UniRef50_UPI0000DD794E Cluster: PREDICTED: hypothetical protein;... 32 9.6
UniRef50_A5TX95 Cluster: Triacylglycerol lipase; n=3; Fusobacter... 32 9.6
UniRef50_Q9U982 Cluster: Drosophila dodeca-satellite protein 1; ... 32 9.6
UniRef50_Q20F10 Cluster: Chloroplast 30S ribosomal protein S3; n... 32 9.6
>UniRef50_P23396 Cluster: 40S ribosomal protein S3; n=174;
Eukaryota|Rep: 40S ribosomal protein S3 - Homo sapiens
(Human)
Length = 243
Score = 200 bits (489), Expect = 2e-50
Identities = 99/122 (81%), Positives = 102/122 (83%)
Frame = +3
Query: 255 ELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG 434
ELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRG
Sbjct: 85 ELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRG 144
Query: 435 QRAKSMKFVDGLMIHSGDPCNDYVKLLPDMCFSDKEY*AIKVKIMLPWDQQGKNGPKKPQ 614
QRAKSMKFVDGLMIHSGDP N YV + IKVKIMLPWD GK GPKKP
Sbjct: 145 QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPL 204
Query: 615 PD 620
PD
Sbjct: 205 PD 206
Score = 145 bits (351), Expect = 9e-34
Identities = 73/85 (85%), Positives = 78/85 (91%)
Frame = +1
Query: 1 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 180
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 181 GEKGRRIRELTSVVQKRFNIPEQSV 255
GEKGRRIRELT+VVQKRF PE SV
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSV 84
>UniRef50_Q8SQM3 Cluster: 40S ribosomal protein S3; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S3 -
Encephalitozoon cuniculi
Length = 228
Score = 117 bits (282), Expect = 2e-25
Identities = 56/122 (45%), Positives = 80/122 (65%)
Frame = +3
Query: 255 ELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG 434
E+ EKV +GLCA+ QA +R K++GG+ RRA L+ + A+GC+++VSGKL+G
Sbjct: 96 EIVVEKVHEKGLCALIQANFIREKILGGVQYRRAVNMALKTARHAKAQGCQIIVSGKLKG 155
Query: 435 QRAKSMKFVDGLMIHSGDPCNDYVKLLPDMCFSDKEY*AIKVKIMLPWDQQGKNGPKKPQ 614
QRAKS+KF DG++IHSGD DY+ + + I+V+IMLP+D +G GP P
Sbjct: 156 QRAKSVKFQDGVLIHSGDAVKDYINTGYATVETKQGVIGIQVRIMLPYDPEGVLGPNYPL 215
Query: 615 PD 620
PD
Sbjct: 216 PD 217
Score = 56.4 bits (130), Expect = 5e-07
Identities = 23/81 (28%), Positives = 48/81 (59%)
Frame = +1
Query: 31 KFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIREL 210
+F+ +G+ AEL EF + L +G+S +E+R+ +II+ + +GEK R+R+
Sbjct: 21 RFMKNGLMNAELKEFFEKALVNEGFSTMELRMQETPIKIILKVAKPHEAIGEKKFRLRQF 80
Query: 211 TSVVQKRFNIPEQSVNCMLKR 273
+ +R +P++SV ++++
Sbjct: 81 QHLAAQRLEVPDESVEIVVEK 101
>UniRef50_A2DIM3 Cluster: Ribosomal protein S3, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3,
putative - Trichomonas vaginalis G3
Length = 216
Score = 116 bits (279), Expect = 5e-25
Identities = 55/122 (45%), Positives = 78/122 (63%)
Frame = +3
Query: 255 ELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG 434
E++ +++ +GL A+ Q ESLRYKLI + RRA Y ++RF+M++GARGCEV +SGKLRG
Sbjct: 86 EIFIDRIQRKGLSALNQLESLRYKLIARIPARRAAYSIIRFVMDAGARGCEVAISGKLRG 145
Query: 435 QRAKSMKFVDGLMIHSGDPCNDYVKLLPDMCFSDKEY*AIKVKIMLPWDQQGKNGPKKPQ 614
RA + K+ +G M+ SGD +V + I+V IML D G +GPK+ Q
Sbjct: 146 ARASTSKYKEGYMVKSGDVTKQFVTQAVGHIPMKQATIGIRVLIMLAQDPSGISGPKESQ 205
Query: 615 PD 620
PD
Sbjct: 206 PD 207
Score = 86.6 bits (205), Expect = 4e-16
Identities = 40/91 (43%), Positives = 58/91 (63%)
Frame = +1
Query: 1 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 180
M +K R+ + G+F AELNE LTREL ++GY G EVR TP R+EIII A T+ +
Sbjct: 1 MKAQRCTKVRRIIETGLFYAELNELLTRELTKEGYGGCEVRQTPTRTEIIIKAANTKEFV 60
Query: 181 GEKGRRIRELTSVVQKRFNIPEQSVNCMLKR 273
GRR++E+ ++QKR+ + E S+ + R
Sbjct: 61 DNHGRRLQEVRMMIQKRWRLKEDSLEIFIDR 91
>UniRef50_Q59N00 Cluster: Likely cytosolic ribosomal protein S3;
n=4; Saccharomycetales|Rep: Likely cytosolic ribosomal
protein S3 - Candida albicans (Yeast)
Length = 251
Score = 116 bits (279), Expect = 5e-25
Identities = 57/104 (54%), Positives = 71/104 (68%)
Frame = +3
Query: 258 LYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQ 437
+YAE+V RGL A QAE+L+ KL+ GL +RRA YGVLRF M +GA+G EVV+SGKLR
Sbjct: 87 IYAERVEERGLSAAVQAEALKAKLLSGLPIRRAAYGVLRFAMGAGAKGVEVVISGKLRAA 146
Query: 438 RAKSMKFVDGLMIHSGDPCNDYVKLLPDMCFSDKEY*AIKVKIM 569
RAKS K+ DG MIHSG P D++ + + IKVKIM
Sbjct: 147 RAKSQKYADGFMIHSGQPTRDFIDIAIRHVLMRQGVLGIKVKIM 190
Score = 109 bits (262), Expect = 5e-23
Identities = 51/86 (59%), Positives = 65/86 (75%)
Frame = +1
Query: 16 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 195
+SKK+K V DGVF AELNEF TRELAE GY+GVEVR TP + E+I+ A+ TQ VLGE+GR
Sbjct: 6 LSKKKKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEVIVKASNTQGVLGEQGR 65
Query: 196 RIRELTSVVQKRFNIPEQSVNCMLKR 273
RI ELTS++ KRF + + + +R
Sbjct: 66 RIHELTSLIVKRFKLSPEGIAIYAER 91
>UniRef50_Q38EW1 Cluster: 40S ribosomal protein S3, putative; n=4;
Trypanosoma|Rep: 40S ribosomal protein S3, putative -
Trypanosoma brucei
Length = 266
Score = 115 bits (276), Expect = 1e-24
Identities = 56/107 (52%), Positives = 72/107 (67%)
Frame = +3
Query: 255 ELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG 434
+L+AE+V RGL A+AQAESLR+KL+ L VRRA G++R++MESGA+GCEV + GK++G
Sbjct: 136 QLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIRYVMESGAKGCEVTIGGKIKG 195
Query: 435 QRAKSMKFVDGLMIHSGDPCNDYVKLLPDMCFSDKEY*AIKVKIMLP 575
QRAKSM F DG MI SG +V C + VKIM P
Sbjct: 196 QRAKSMTFRDGYMIKSGTAHKHFVDTATRHCHLRAGTIGVNVKIMRP 242
Score = 109 bits (262), Expect = 5e-23
Identities = 53/86 (61%), Positives = 67/86 (77%)
Frame = +1
Query: 16 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 195
+SKKR V DGVF AEL EFL RELA+DG++GVE RVTP R+EI+I +T+T+ VLGEKGR
Sbjct: 56 LSKKRMMVRDGVFYAELFEFLKRELADDGFAGVEHRVTPTRTEIVIRSTKTREVLGEKGR 115
Query: 196 RIRELTSVVQKRFNIPEQSVNCMLKR 273
RIRELT+ +Q+RFN E + +R
Sbjct: 116 RIRELTACLQQRFNYKEGKLQLFAER 141
>UniRef50_A7NTL0 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 617
Score = 114 bits (274), Expect = 2e-24
Identities = 58/83 (69%), Positives = 67/83 (80%)
Frame = +1
Query: 7 VNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGE 186
V +SKKRKF DGVF A LNE LTREL E+GYSG EVRVTP+ +EIII AT+T +VLGE
Sbjct: 2 VTQMSKKRKFAVDGVFFAGLNEVLTRELVENGYSGDEVRVTPMCTEIIIRATQTHNVLGE 61
Query: 187 KGRRIRELTSVVQKRFNIPEQSV 255
KG++I+ELTSVVQKRF E SV
Sbjct: 62 KGKKIKELTSVVQKRFEFLENSV 84
Score = 76.2 bits (179), Expect = 6e-13
Identities = 55/122 (45%), Positives = 60/122 (49%)
Frame = +3
Query: 255 ELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG 434
EL AEKV RG AIAQAESLRYKL+GGLA+ L
Sbjct: 85 ELCAEKVNNRGFYAIAQAESLRYKLLGGLAM--------------------------LCA 118
Query: 435 QRAKSMKFVDGLMIHSGDPCNDYVKLLPDMCFSDKEY*AIKVKIMLPWDQQGKNGPKKPQ 614
QRAKSMKF DG +I SG P DY+ L IKVKIM WD +GK P
Sbjct: 119 QRAKSMKFKDGYLISSGQPVKDYIDLAVRHVLRQGVL-GIKVKIMFNWDPKGKQSLTTPL 177
Query: 615 PD 620
PD
Sbjct: 178 PD 179
>UniRef50_Q22AV9 Cluster: KH domain containing protein; n=3;
Oligohymenophorea|Rep: KH domain containing protein -
Tetrahymena thermophila SB210
Length = 253
Score = 110 bits (265), Expect = 2e-23
Identities = 53/124 (42%), Positives = 81/124 (65%), Gaps = 2/124 (1%)
Frame = +3
Query: 255 ELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG 434
+++AE + +GLCA AQ E++ YKL+ + VR A +++ +++ GA+GCE+++SGKL+
Sbjct: 98 QIWAEPIKFKGLCASAQVEAMNYKLLKDVPVRLAANYIIKSVIQDGAKGCEIIISGKLKQ 157
Query: 435 QRAKSMKFVDGLMIHSGDPCNDYVKLLPDMCFSDKEY*AIKVKIMLPWDQQ--GKNGPKK 608
QRAK+MKF G MI +G P NDY+ + F + +KVKIMLP++ K G K
Sbjct: 158 QRAKTMKFKQGYMICTGQPKNDYIDVAVRHVFFKQGIMGVKVKIMLPYEPNPAKKFGVKT 217
Query: 609 PQPD 620
P PD
Sbjct: 218 PIPD 221
Score = 88.6 bits (210), Expect = 1e-16
Identities = 39/80 (48%), Positives = 58/80 (72%)
Frame = +1
Query: 16 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 195
I+KK+KFV DGVF AEL+ F ++ L + GY+G+EVR TP ++EI I AT+ Q V+G +G+
Sbjct: 18 INKKKKFVADGVFNAELHSFFSKSLQDAGYAGIEVRRTPTKTEIRIKATKPQQVIGVEGK 77
Query: 196 RIRELTSVVQKRFNIPEQSV 255
+ +ELT +QKRF + +
Sbjct: 78 KHKELTQFLQKRFGYSDDQI 97
>UniRef50_Q01BA3 Cluster: Putative ribosomal protein; n=1;
Ostreococcus tauri|Rep: Putative ribosomal protein -
Ostreococcus tauri
Length = 145
Score = 110 bits (264), Expect = 3e-23
Identities = 54/92 (58%), Positives = 65/92 (70%)
Frame = +3
Query: 345 VRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVKLLPDM 524
VR ACYGVLR+IMESGA+G EVVVSGKLRGQRAK+MKF DG MI SG+P DY+
Sbjct: 30 VRSACYGVLRYIMESGAKGAEVVVSGKLRGQRAKAMKFKDGYMISSGNPVRDYIVSCTRH 89
Query: 525 CFSDKEY*AIKVKIMLPWDQQGKNGPKKPQPD 620
+ ++VKIML D +G++GP P PD
Sbjct: 90 ALLRQGTIGMRVKIMLDHDPKGRDGPSTPIPD 121
>UniRef50_UPI00005A35DE Cluster: PREDICTED: similar to 40S ribosomal
protein S3; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S3 - Canis familiaris
Length = 161
Score = 94.3 bits (224), Expect = 2e-18
Identities = 45/57 (78%), Positives = 51/57 (89%)
Frame = +1
Query: 19 SKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEK 189
SKKR+FV DG+F+AELNEFLTRELAEDG S VEVRVTP + EIII+ TRTQ+VLGEK
Sbjct: 6 SKKRQFVADGIFRAELNEFLTRELAEDGDSRVEVRVTPTKPEIIILTTRTQNVLGEK 62
Score = 60.9 bits (141), Expect = 2e-08
Identities = 29/43 (67%), Positives = 33/43 (76%)
Frame = +3
Query: 378 IMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYV 506
+ ESGA+G E +VSGKL+GQRAKS KFVD MIHS D N YV
Sbjct: 80 VQESGAKGYEAMVSGKLQGQRAKSAKFVDDSMIHSRDCVNHYV 122
>UniRef50_A7NXL1 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_2, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 243
Score = 87.0 bits (206), Expect = 3e-16
Identities = 53/116 (45%), Positives = 66/116 (56%)
Frame = +3
Query: 255 ELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG 434
ELYAEK R AIAQAESLR+KL+GGL VRRA YGVL F+MESG +GCEV
Sbjct: 139 ELYAEKFNNRVFYAIAQAESLRFKLLGGLVVRRAGYGVLSFVMESGTKGCEV-------- 190
Query: 435 QRAKSMKFVDGLMIHSGDPCNDYVKLLPDMCFSDKEY*AIKVKIMLPWDQQGKNGP 602
+ +I SG P DY+ + + +IKVKI++ QG+ GP
Sbjct: 191 --------IGWYIISSGQPVKDYINSVVRHVLLKQGVLSIKVKIIVRLGSQGQAGP 238
Score = 57.6 bits (133), Expect = 2e-07
Identities = 28/45 (62%), Positives = 36/45 (80%)
Frame = +1
Query: 142 EIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVNCMLKRW 276
EIII AT+TQ+VLG+KGR+IRELTSVVQKRF E +V +++
Sbjct: 101 EIIIHATQTQNVLGKKGRKIRELTSVVQKRFEFLENNVELYAEKF 145
>UniRef50_Q7QNT9 Cluster: GLP_157_11435_12088; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_157_11435_12088 - Giardia lamblia
ATCC 50803
Length = 217
Score = 79.8 bits (188), Expect = 5e-14
Identities = 35/78 (44%), Positives = 53/78 (67%)
Frame = +3
Query: 258 LYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQ 437
++ +K+ RGL A ++LR KL + +RRA Y ++R M +GA GCEV+V+GKLR Q
Sbjct: 92 IWVDKIIKRGLSAEIMVDNLRAKLEEAMPIRRAAYSIIRTAMRAGAAGCEVIVAGKLRAQ 151
Query: 438 RAKSMKFVDGLMIHSGDP 491
RA++ KF +G +I +G P
Sbjct: 152 RARANKFKEGCLISTGHP 169
Score = 42.3 bits (95), Expect = 0.009
Identities = 21/76 (27%), Positives = 41/76 (53%)
Frame = +1
Query: 31 KFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIREL 210
K++ D + +AEL+EF +REL + GY+ + T +II + V+G+ R+ ++
Sbjct: 16 KYLNDCIMEAELHEFFSRELVDAGYASCSLCRTIDSICVIIQCAEPEVVMGDNHYRLHKI 75
Query: 211 TSVVQKRFNIPEQSVN 258
++ RF ++ N
Sbjct: 76 EYLLAGRFMCDPKNFN 91
>UniRef50_A7NXL5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_2, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 149
Score = 69.3 bits (162), Expect = 7e-11
Identities = 33/45 (73%), Positives = 39/45 (86%)
Frame = +1
Query: 85 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSV 219
+++EDGYSGV+VRVTP+R EIII ATRTQ+ LGEK RRIREL V
Sbjct: 16 DISEDGYSGVQVRVTPMRMEIIIHATRTQNALGEKRRRIRELILV 60
>UniRef50_A5ATU8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 286
Score = 66.5 bits (155), Expect = 5e-10
Identities = 31/46 (67%), Positives = 38/46 (82%)
Frame = +1
Query: 85 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVV 222
++ EDGYS V+VRVTP+ EII+ ATRTQ+ L EKGRRIRELT V+
Sbjct: 139 DILEDGYSNVKVRVTPMGMEIIVRATRTQNALSEKGRRIRELTLVM 184
>UniRef50_Q8TRU1 Cluster: 30S ribosomal protein S3P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S3P -
Methanosarcina acetivorans
Length = 318
Score = 66.5 bits (155), Expect = 5e-10
Identities = 35/84 (41%), Positives = 50/84 (59%)
Frame = +3
Query: 255 ELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG 434
++ A++V L A A L + G R+A + LR +M +GA GCEVV+SGKL G
Sbjct: 79 QIDAQEVKRPELNAQMMASRLAASIERGWYFRKAGHNTLRAVMNAGALGCEVVISGKLTG 138
Query: 435 QRAKSMKFVDGLMIHSGDPCNDYV 506
R++ KFVDG + HSG+P + V
Sbjct: 139 ARSRVEKFVDGYIKHSGNPVEEVV 162
Score = 62.1 bits (144), Expect = 1e-08
Identities = 30/95 (31%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Frame = +1
Query: 25 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 204
++KFV DG KA ++E+ +L+ GY G+E+ TP+ ++I+I + + V+G+ G+ IR
Sbjct: 4 EKKFVNDGYVKASMDEYFAEQLSRAGYGGMELNRTPMGTQIVIYSEKPGMVIGKAGKVIR 63
Query: 205 ELTSVVQKRFNIPEQSVNCM-LKRWLLVAFALSPR 306
+LT V ++++ ++ +KR L A ++ R
Sbjct: 64 KLTRDVANKYSLENPQIDAQEVKRPELNAQMMASR 98
>UniRef50_A7QEK7 Cluster: Chromosome chr17 scaffold_85, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr17 scaffold_85, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 514
Score = 66.1 bits (154), Expect = 6e-10
Identities = 32/45 (71%), Positives = 37/45 (82%)
Frame = +1
Query: 85 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSV 219
++ EDGYS V+VRVTP+ EIII ATRTQ+ L EKGRRIRELT V
Sbjct: 406 DILEDGYSDVKVRVTPMGMEIIIRATRTQNALSEKGRRIRELTLV 450
Score = 42.7 bits (96), Expect = 0.007
Identities = 19/32 (59%), Positives = 26/32 (81%)
Frame = +1
Query: 85 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 180
++ EDGYS ++V+VT +R EIII ATRTQ+ L
Sbjct: 281 DIPEDGYSDIKVKVTGMRMEIIIHATRTQNAL 312
>UniRef50_Q8U004 Cluster: 30S ribosomal protein S3P; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S3P -
Pyrococcus furiosus
Length = 210
Score = 66.1 bits (154), Expect = 6e-10
Identities = 28/77 (36%), Positives = 50/77 (64%)
Frame = +1
Query: 25 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 204
+R F+ + V + ++EFL +EL GY G++++ TP+ +++II A V+G GRRIR
Sbjct: 4 ERYFIREAVREMLIDEFLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIR 63
Query: 205 ELTSVVQKRFNIPEQSV 255
ELT +++K+F + +
Sbjct: 64 ELTRILEKQFGLENPQI 80
Score = 66.1 bits (154), Expect = 6e-10
Identities = 40/107 (37%), Positives = 54/107 (50%)
Frame = +3
Query: 255 ELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG 434
++ E++ L A QA L L G+ RRA Y LR IM +GARG E+ +SGKL G
Sbjct: 79 QIEVEEIKNPYLNAKVQAVRLAQALERGIHFRRAAYAALRAIMNNGARGVEIRLSGKLTG 138
Query: 435 QRAKSMKFVDGLMIHSGDPCNDYVKLLPDMCFSDKEY*AIKVKIMLP 575
+RAKS++F G + G+P V +KV IM P
Sbjct: 139 ERAKSIRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKVAIMPP 185
>UniRef50_O28360 Cluster: 30S ribosomal protein S3P; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3P -
Archaeoglobus fulgidus
Length = 229
Score = 66.1 bits (154), Expect = 6e-10
Identities = 36/90 (40%), Positives = 51/90 (56%)
Frame = +3
Query: 306 AESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSG 485
A L L G RRA Y L IME+GA+GCE+ +SGKL +RA++ KFV G ++H+G
Sbjct: 95 ASLLARALERGWYFRRAGYRFLYRIMEAGAKGCEIEISGKLVSERARTEKFVAGTIVHTG 154
Query: 486 DPCNDYVKLLPDMCFSDKEY*AIKVKIMLP 575
DP V+ D+ + V+I+ P
Sbjct: 155 DPAESMVQKGFDIAIKKLGVLGVSVRIIPP 184
Score = 48.4 bits (110), Expect = 1e-04
Identities = 25/78 (32%), Positives = 45/78 (57%)
Frame = +1
Query: 25 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 204
+RKFV + + K + E++ E+ G+ GV++ TP+ +++ + R V+G+ GRRI+
Sbjct: 4 ERKFVQERLKKLMVKEWIKDEVRSAGFGGVDILRTPLGTQVTLFVERPGLVIGKGGRRIK 63
Query: 205 ELTSVVQKRFNIPEQSVN 258
LT + K F I V+
Sbjct: 64 ALTEKL-KDFGIENPQVS 80
>UniRef50_P20281 Cluster: 30S ribosomal protein S3P; n=5;
Halobacteriaceae|Rep: 30S ribosomal protein S3P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 304
Score = 65.7 bits (153), Expect = 8e-10
Identities = 25/81 (30%), Positives = 55/81 (67%)
Frame = +1
Query: 16 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 195
++ +++F+ DG+ + +++EF EL GY G++V TP+ ++I++ A + V+G+ G+
Sbjct: 1 MADEQQFIEDGLQRTQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 196 RIRELTSVVQKRFNIPEQSVN 258
IR++T+ ++ RFN+ + V+
Sbjct: 61 NIRKITTELEDRFNLDDPQVD 81
Score = 51.6 bits (118), Expect = 1e-05
Identities = 31/90 (34%), Positives = 48/90 (53%)
Frame = +3
Query: 306 AESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSG 485
A+ L L G R+A + + IMESGA G E+V+SGK+ G R++ KF G + H+G
Sbjct: 96 ADRLANALERGWYFRKAGHTTIDRIMESGALGAEIVLSGKVTGARSRVEKFNRGYVKHNG 155
Query: 486 DPCNDYVKLLPDMCFSDKEY*AIKVKIMLP 575
+P + V + ++VKI+ P
Sbjct: 156 EPAEEIVDSGVGVAVMKLGTIGVRVKIIPP 185
>UniRef50_A6R2L3 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 151
Score = 64.9 bits (151), Expect = 1e-09
Identities = 32/46 (69%), Positives = 37/46 (80%)
Frame = +1
Query: 13 NISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEII 150
+ISK+RKFV GVF A LN F RELAE+GYSGVEVRVTP ++II
Sbjct: 84 DISKRRKFVVGGVFYAGLNGFFLRELAEEGYSGVEVRVTPTGTDII 129
>UniRef50_Q8LNX7 Cluster: Putative ribosomal protein S3; n=1; Zinnia
elegans|Rep: Putative ribosomal protein S3 - Zinnia
elegans (Zinnia)
Length = 143
Score = 64.5 bits (150), Expect = 2e-09
Identities = 32/62 (51%), Positives = 36/62 (58%)
Frame = +3
Query: 435 QRAKSMKFVDGLMIHSGDPCNDYVKLLPDMCFSDKEY*AIKVKIMLPWDQQGKNGPKKPQ 614
QRAKSMKF DG M+ SG P +Y+ + IKVKIML WD GK GPK P
Sbjct: 2 QRAKSMKFKDGYMVSSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPTGKLGPKTPL 61
Query: 615 PD 620
PD
Sbjct: 62 PD 63
>UniRef50_A3CT03 Cluster: 30S ribosomal protein S3P; n=4;
Archaea|Rep: 30S ribosomal protein S3P - Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Length = 234
Score = 64.1 bits (149), Expect = 3e-09
Identities = 37/107 (34%), Positives = 56/107 (52%)
Frame = +3
Query: 255 ELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG 434
++ ++V A AE L L G R+A +R IMESGA GCEV+V+GKL G
Sbjct: 79 QVEVQQVQNPNFNAQIMAERLANALERGWYFRKAGSSTIRRIMESGALGCEVIVAGKLTG 138
Query: 435 QRAKSMKFVDGLMIHSGDPCNDYVKLLPDMCFSDKEY*AIKVKIMLP 575
R+++ KF +G + H G+P V+ + ++VKI+ P
Sbjct: 139 SRSRTQKFTEGYIKHCGEPSETIVEKGYALAIKKLGTIGVQVKIVPP 185
Score = 59.7 bits (138), Expect = 6e-08
Identities = 25/77 (32%), Positives = 48/77 (62%)
Frame = +1
Query: 25 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 204
++KF+ DGV + +FLT+EL GY G+++ TP+ +++ I A + V+G+ G+++R
Sbjct: 4 EKKFITDGVRNVRVEKFLTKELKRAGYGGMDIARTPLGTQVTIFAEKPGIVIGKGGKQVR 63
Query: 205 ELTSVVQKRFNIPEQSV 255
+LT + ++I V
Sbjct: 64 QLTQDLATDYDIESPQV 80
>UniRef50_Q8TX35 Cluster: 30S ribosomal protein S3P; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3P -
Methanopyrus kandleri
Length = 227
Score = 62.5 bits (145), Expect = 8e-09
Identities = 29/67 (43%), Positives = 45/67 (67%)
Frame = +3
Query: 306 AESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSG 485
A L L G+ RRA YG LR IM +GA+G +++SGKL G RA++ KF++G + + G
Sbjct: 104 ARRLASALERGIHFRRAAYGALRRIMNAGAKGAMIILSGKLIGARARTEKFMEGAVKYCG 163
Query: 486 DPCNDYV 506
+P ++Y+
Sbjct: 164 EPGDEYM 170
Score = 58.8 bits (136), Expect = 1e-07
Identities = 28/74 (37%), Positives = 42/74 (56%)
Frame = +1
Query: 13 NISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKG 192
N+ +KFV G+ K EL+E+L EL GY G+ ++ P ++II R +G +G
Sbjct: 7 NVPVHKKFVQYGMLKTELDEYLEEELGRAGYGGMRLQRVPNATKIIAYVERPAIAIGRRG 66
Query: 193 RRIRELTSVVQKRF 234
R IR + VQ+RF
Sbjct: 67 RNIRRVEEEVQERF 80
>UniRef50_Q6LXE7 Cluster: 30S ribosomal protein S3P; n=5;
Methanococcus|Rep: 30S ribosomal protein S3P -
Methanococcus maripaludis
Length = 211
Score = 61.7 bits (143), Expect = 1e-08
Identities = 35/118 (29%), Positives = 58/118 (49%)
Frame = +3
Query: 222 TEAIQHSRAICELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARG 401
T A ++S ++ ++V L + L G+ R+ + +R +M SGA+G
Sbjct: 67 TLATEYSVKNPQIEVKQVENPDLDPAVVGHKIASSLERGMHFRKTAHSAIRRVMGSGAKG 126
Query: 402 CEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVKLLPDMCFSDKEY*AIKVKIMLP 575
++VSGKL G+R+++ KF+DG M H G+P V + + VKIM P
Sbjct: 127 VAIIVSGKLSGERSRTEKFMDGYMKHCGEPAEALVNKSHQLAKLKLGIVGVTVKIMRP 184
Score = 54.4 bits (125), Expect = 2e-06
Identities = 22/77 (28%), Positives = 44/77 (57%)
Frame = +1
Query: 25 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 204
+R FVG+ V + ++E+ +L GYS ++ + TPI + I + A + V+G KG+ ++
Sbjct: 3 ERTFVGENVSETLIDEYFKTKLVRAGYSHIDFKKTPIGTRITVFAEKPGFVIGRKGKMVK 62
Query: 205 ELTSVVQKRFNIPEQSV 255
ELT + +++ +
Sbjct: 63 ELTETLATEYSVKNPQI 79
>UniRef50_O26116 Cluster: 30S ribosomal protein S3P; n=3;
Methanobacteriaceae|Rep: 30S ribosomal protein S3P -
Methanobacterium thermoautotrophicum
Length = 258
Score = 58.8 bits (136), Expect = 1e-07
Identities = 23/77 (29%), Positives = 49/77 (63%)
Frame = +1
Query: 25 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 204
++ FV +G+ + ++E+L +EL GY G++V+VTP+ + +++ A R V+G G+ +R
Sbjct: 3 EKDFVVEGLRRTRIDEYLEKELERAGYGGMDVQVTPMGTMVVVYAERPGMVIGRGGKTVR 62
Query: 205 ELTSVVQKRFNIPEQSV 255
+T ++ +F++ V
Sbjct: 63 AITQKLKNKFDLENPQV 79
Score = 56.4 bits (130), Expect = 5e-07
Identities = 27/68 (39%), Positives = 40/68 (58%)
Frame = +3
Query: 306 AESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSG 485
A + L G+ RR Y +R IM +GA+G EV +SGK+RG R+ + KF DG + G
Sbjct: 95 AHKIAAMLQRGMHFRRVAYTTMRRIMAAGAQGVEVTISGKIRGARSATAKFTDGYIKKCG 154
Query: 486 DPCNDYVK 509
+P +V+
Sbjct: 155 EPSVKHVR 162
>UniRef50_UPI00015BB204 Cluster: SSU ribosomal protein S3P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S3P - Ignicoccus hospitalis KIN4/I
Length = 241
Score = 58.4 bits (135), Expect = 1e-07
Identities = 26/85 (30%), Positives = 54/85 (63%)
Frame = +1
Query: 1 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 180
M+V + K+ F+ + + +++E+L + GYS VE++ TP+ + +II A R+ +++
Sbjct: 1 MSVAKKNIKKYFLEQALTQVKVDEYLAYKFHSVGYSKVELQKTPMGTRVIIYAERSGAII 60
Query: 181 GEKGRRIRELTSVVQKRFNIPEQSV 255
G +G+ I+++T V+++ F IP V
Sbjct: 61 GRRGQTIKQITKVLEEWFGIPNPQV 85
Score = 53.6 bits (123), Expect = 4e-06
Identities = 33/73 (45%), Positives = 41/73 (56%)
Frame = +3
Query: 270 KVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKS 449
KV L A A L L G RRA Y LR IM +GA G +V VSGKLRG+RA+
Sbjct: 89 KVEEPELDARVMAFRLANALQRGFHFRRAAYTTLRRIMGAGAIGAQVKVSGKLRGERARF 148
Query: 450 MKFVDGLMIHSGD 488
K++ G + SG+
Sbjct: 149 EKYIAGKVYKSGN 161
>UniRef50_A1RXG6 Cluster: 30S ribosomal protein S3P; n=2;
Thermofilum pendens Hrk 5|Rep: 30S ribosomal protein S3P
- Thermofilum pendens (strain Hrk 5)
Length = 202
Score = 57.2 bits (132), Expect = 3e-07
Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
Frame = +3
Query: 270 KVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKS 449
+V + L A A + L+ G+ RRA L IM +GARG E+V+SGKL QR ++
Sbjct: 85 EVPNQDLNAKIMAYRVARALVRGVRFRRAALVALNRIMAAGARGAEIVISGKLTSQRHRT 144
Query: 450 MKFVDGLMIHSGDPCNDYV-KLLPDMCFSDKEY*AIKVKIMLP 575
KF G + SG+P + V + + + Y +KV+IM P
Sbjct: 145 EKFTRGYVPKSGEPGEELVDEAIVHVLLKLGMY-GVKVRIMKP 186
Score = 48.0 bits (109), Expect = 2e-04
Identities = 23/77 (29%), Positives = 40/77 (51%)
Frame = +1
Query: 28 RKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRE 207
RK + G+ LNE+L R+L Y + TPI +++I+ A V+G KG I+
Sbjct: 6 RKVISQGLQYMMLNEYLQRQLVRANYVHAQFFKTPIGTKVIVYAGVPGLVIGRKGANIKA 65
Query: 208 LTSVVQKRFNIPEQSVN 258
+ V+++ F I ++
Sbjct: 66 IAEVLEREFGIENPQID 82
>UniRef50_Q9UXA0 Cluster: 30S ribosomal protein S3P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S3P - Sulfolobus
solfataricus
Length = 229
Score = 57.2 bits (132), Expect = 3e-07
Identities = 25/77 (32%), Positives = 44/77 (57%)
Frame = +1
Query: 25 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 204
KR F+ + K +++E+L ++ Y+GVEV TPI + +II A R ++G GR I+
Sbjct: 5 KRYFLEKSIVKVKIDEYLAKQYYNAEYAGVEVLKTPIGTRVIIYAGRPSMIIGRGGRNIK 64
Query: 205 ELTSVVQKRFNIPEQSV 255
+L + +K F + +
Sbjct: 65 QLAQIFEKVFGLENPQI 81
Score = 46.0 bits (104), Expect = 7e-04
Identities = 26/66 (39%), Positives = 37/66 (56%)
Frame = +3
Query: 288 LCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDG 467
L A A L L G RRA + +R IM +GA G E+++SGKL +RA+ K +G
Sbjct: 91 LNARVMAFRLAIALEKGYHFRRAAFISMRRIMNAGALGAEIIISGKLTTERARYEKLKEG 150
Query: 468 LMIHSG 485
++ SG
Sbjct: 151 IVYKSG 156
>UniRef50_Q4JB46 Cluster: 30S ribosomal protein S3P; n=3;
Sulfolobaceae|Rep: 30S ribosomal protein S3P -
Sulfolobus acidocaldarius
Length = 231
Score = 54.0 bits (124), Expect = 3e-06
Identities = 24/77 (31%), Positives = 44/77 (57%)
Frame = +1
Query: 25 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 204
KR F+ K ++E+L ++ Y+GVE+ TPI + +II A R ++G+ G+ I+
Sbjct: 5 KRHFLQKAAIKVMVDEYLAKQFYNAEYAGVEIVKTPIGTRVIIYAGRPPLIIGKGGKTIK 64
Query: 205 ELTSVVQKRFNIPEQSV 255
+L V++K F + +
Sbjct: 65 QLAQVLEKFFGLENPQI 81
Score = 49.2 bits (112), Expect = 8e-05
Identities = 30/66 (45%), Positives = 36/66 (54%)
Frame = +3
Query: 288 LCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDG 467
L A A L L G RRA + +R IM SGA G EV+VSGKL +RAK K +G
Sbjct: 91 LNARVMAFRLAIALEKGYHFRRAAFITIRRIMSSGAVGAEVIVSGKLTSERAKYEKLKEG 150
Query: 468 LMIHSG 485
+ SG
Sbjct: 151 TVYKSG 156
>UniRef50_A5B260 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 414
Score = 53.2 bits (122), Expect = 5e-06
Identities = 25/47 (53%), Positives = 36/47 (76%)
Frame = +1
Query: 85 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 225
++ EDGYS ++V+VT + EIII AT+TQ+ L E GR++RELT V +
Sbjct: 238 DIPEDGYSDIKVKVTGMCMEIIIRATQTQNALIENGRKMRELTLVTR 284
>UniRef50_A0RVX9 Cluster: 30S ribosomal protein S3P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S3P -
Cenarchaeum symbiosum
Length = 261
Score = 52.4 bits (120), Expect = 8e-06
Identities = 26/66 (39%), Positives = 39/66 (59%)
Frame = +1
Query: 61 ELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNI 240
+L EFL + + G+SGVEV P ++I + TR V+G KG IRELT ++K F++
Sbjct: 16 KLREFLRENIKDSGFSGVEVEKNPRGTKITLHVTRPGIVIGRKGVGIRELTERLEKDFDL 75
Query: 241 PEQSVN 258
V+
Sbjct: 76 KSPQVD 81
Score = 38.3 bits (85), Expect = 0.15
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +3
Query: 336 GLAVRRACYGVLRFIMES-GARGCEVVVSGKLRGQRAKSMKFVDGLMIHSG 485
G A RRA ++ IME A G ++ +SGKLRG R+ K G++ +G
Sbjct: 106 GTAFRRATMWTIQQIMEKKDAMGVQITISGKLRGDRSAFEKHTSGILPRAG 156
>UniRef50_Q3LWD3 Cluster: Ribosomal protein S3; n=1; Bigelowiella
natans|Rep: Ribosomal protein S3 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 262
Score = 50.8 bits (116), Expect = 3e-05
Identities = 22/53 (41%), Positives = 32/53 (60%)
Frame = +3
Query: 348 RRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYV 506
R + LRF++ SG RGC + + G R +R K+ KF GL+ HSG ND++
Sbjct: 158 RSIIFNTLRFLINSGVRGCMIKLKGVYRSKRTKTFKFRRGLISHSGIQNNDWI 210
>UniRef50_Q9HIR5 Cluster: 30S ribosomal protein S3P; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S3P -
Thermoplasma acidophilum
Length = 225
Score = 48.4 bits (110), Expect = 1e-04
Identities = 18/73 (24%), Positives = 43/73 (58%)
Frame = +1
Query: 22 KKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRI 201
K+RKF+ + V + + E++ +E G+ + ++ TP + I + R V+G +G ++
Sbjct: 2 KERKFINEAVKRLLVCEYVVKETENAGFGNMVMKRTPFGTNITLYVNRPGLVIGRRGSKV 61
Query: 202 RELTSVVQKRFNI 240
+++T ++K++ I
Sbjct: 62 QQMTDTLEKKYGI 74
Score = 43.6 bits (98), Expect = 0.004
Identities = 21/62 (33%), Positives = 38/62 (61%)
Frame = +3
Query: 306 AESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSG 485
A+ + L G + R+A L +++GA+G + +SGK+ G+RA+ KF+ G + +SG
Sbjct: 95 AKKIALSLEKGWSYRKAGNTSLNRTIQAGAKGVLIKISGKISGERARYQKFIYGNVKYSG 154
Query: 486 DP 491
+P
Sbjct: 155 EP 156
>UniRef50_A3DNB3 Cluster: 30S ribosomal protein S3P; n=1;
Staphylothermus marinus F1|Rep: 30S ribosomal protein
S3P - Staphylothermus marinus (strain ATCC 43588 / DSM
3639 / F1)
Length = 224
Score = 48.4 bits (110), Expect = 1e-04
Identities = 24/53 (45%), Positives = 34/53 (64%)
Frame = +3
Query: 348 RRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYV 506
RR +LR +ME+GA G E+++SGKLR +RA+ K G + +GD DYV
Sbjct: 113 RRVAMAMLRRVMEAGAVGAEIIISGKLRSERARYEKLKAGRIYKAGDMV-DYV 164
Score = 45.6 bits (103), Expect = 0.001
Identities = 22/77 (28%), Positives = 40/77 (51%)
Frame = +1
Query: 25 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 204
K F+ + K L+EFL + GY+G+E+ TP ++I A ++G G IR
Sbjct: 7 KSYFIDYSLKKVMLDEFLANYFKDAGYAGMELYKTPTGYRVVIYAEYPGRIIGRGGSIIR 66
Query: 205 ELTSVVQKRFNIPEQSV 255
+L +++Q F + ++
Sbjct: 67 KLMTIMQTHFGLENVNI 83
>UniRef50_Q673S3 Cluster: Ribosomal protein S3; n=2; environmental
samples|Rep: Ribosomal protein S3 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 307
Score = 45.2 bits (102), Expect = 0.001
Identities = 25/67 (37%), Positives = 36/67 (53%)
Frame = +3
Query: 288 LCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDG 467
L A A L L G RRA + + IM++GARGC +++SGK+ G R + KF G
Sbjct: 94 LNAQVMASRLASSLERGWFFRRAGHSTAQNIMDAGARGCLIILSGKISGPRHRVQKFQQG 153
Query: 468 LMIHSGD 488
+ G+
Sbjct: 154 HIKFCGE 160
Score = 41.9 bits (94), Expect = 0.012
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +1
Query: 28 RKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRE 207
R F+ V + + E+L RE G+ G+E TP +++ + A + V+G +G+ I E
Sbjct: 9 RTFINRNVERHMVREYLLRETERAGFGGLEFNRTPEGTKVTLSAEQVGRVIGRRGKVIHE 68
Query: 208 LTSVVQKRFNI--PEQSVN 258
L ++ F + P VN
Sbjct: 69 LQYRLKSDFKLENPRLEVN 87
>UniRef50_Q8ZWI0 Cluster: 30S ribosomal protein S3P; n=6;
Pyrobaculum|Rep: 30S ribosomal protein S3P - Pyrobaculum
aerophilum
Length = 218
Score = 45.2 bits (102), Expect = 0.001
Identities = 19/77 (24%), Positives = 42/77 (54%)
Frame = +1
Query: 28 RKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRE 207
+K + + K + EFL L++ GY E+ TP+ + I+I A R ++G KG ++E
Sbjct: 12 KKILEENKKKWMIKEFLEYRLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVKE 71
Query: 208 LTSVVQKRFNIPEQSVN 258
+++++ + + ++
Sbjct: 72 ISNILTTKLGVENPQID 88
Score = 42.7 bits (96), Expect = 0.007
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +3
Query: 336 GLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVK 509
G+ RR + +R +ME+GA+G E+VVSGKL +RA+ K G + G + V+
Sbjct: 116 GVRFRRVMFVAIRQLMEAGAKGFEIVVSGKLSTERARFEKQTYGKLYKIGYDAKNRVR 173
>UniRef50_A3H696 Cluster: Ribosomal protein S3-like; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S3-like -
Caldivirga maquilingensis IC-167
Length = 226
Score = 44.4 bits (100), Expect = 0.002
Identities = 20/58 (34%), Positives = 35/58 (60%)
Frame = +3
Query: 336 GLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVK 509
G+ RRA LR + E+ +G EV++SGKL +R++ K+ G++I +G + V+
Sbjct: 104 GIRFRRAAIIALRQLQEANVQGAEVIISGKLTTERSRFEKYTTGIVIKAGQDALEKVQ 161
Score = 41.5 bits (93), Expect = 0.016
Identities = 16/71 (22%), Positives = 40/71 (56%)
Frame = +1
Query: 28 RKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRE 207
++ + D K + E+L L + Y ++ T + + I+I+A + ++G KG++++
Sbjct: 3 KRIIDDNKKKWMIKEYLNIALTRNRYVDSIIQRTTLGTRIVIIAEKKNRIIGRKGQQVKA 62
Query: 208 LTSVVQKRFNI 240
L +++ +FN+
Sbjct: 63 LADILKSKFNL 73
>UniRef50_Q74MZ4 Cluster: 30S ribosomal protein S3P; n=2;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S3P -
Nanoarchaeum equitans
Length = 230
Score = 41.5 bits (93), Expect = 0.016
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = +3
Query: 342 AVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSG 485
A RR L IM +GA G E+V++G+L GQR K+ +F G + +G
Sbjct: 108 AYRRLAQRYLETIMNAGAIGAEIVIAGRLSGQRGKTWRFKAGNLRKTG 155
>UniRef50_Q9RXJ6 Cluster: 30S ribosomal protein S3; n=2;
Deinococcus|Rep: 30S ribosomal protein S3 - Deinococcus
radiodurans
Length = 249
Score = 38.3 bits (85), Expect = 0.15
Identities = 19/43 (44%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Frame = +3
Query: 342 AVRRACYGVLRFIMESGARGCEVVVSGKLRG-QRAKSMKFVDG 467
A RRA + +MESGARG +V++SG+L G ++A++ K ++G
Sbjct: 130 AFRRAMKQAAQRVMESGARGVKVILSGRLGGAEQARTEKVLEG 172
>UniRef50_A5DF25 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 278
Score = 37.9 bits (84), Expect = 0.19
Identities = 21/74 (28%), Positives = 42/74 (56%)
Frame = -1
Query: 500 IIARVSRVDHESIYKLH*FGTLTTQLARYNNFTXTGTRFHDETENTIASTTYSETSDKLV 321
++ ++RVDHE++ L G+ ++Q +N T H ++++T+ +++ +T +L
Sbjct: 105 VVGWLTRVDHETVRVLLRLGSSSSQFTGDDNLHTLSTSSHGKSQHTVGGSSHWQTVQQLG 164
Query: 320 S*RFGLGDSAKATS 279
FGL DS+ TS
Sbjct: 165 FQGFGL-DSSGQTS 177
>UniRef50_Q7MTL9 Cluster: 30S ribosomal protein S3; n=19;
Bacteroidetes|Rep: 30S ribosomal protein S3 -
Porphyromonas gingivalis (Bacteroides gingivalis)
Length = 246
Score = 37.5 bits (83), Expect = 0.26
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +3
Query: 288 LCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG-QRAKSMKFVD 464
L A AE++ +L G +A RRA + M GA G ++ VSG+L G + A+S F +
Sbjct: 110 LDAAIVAENIARQLEGKIAYRRAVKMAIASAMRMGAEGIKIQVSGRLNGAEMARSEMFKE 169
Query: 465 G 467
G
Sbjct: 170 G 170
>UniRef50_Q52188 Cluster: TraC precursor; n=9; root|Rep: TraC
precursor - Enterococcus faecalis (Streptococcus
faecalis)
Length = 545
Score = 35.5 bits (78), Expect = 1.0
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +1
Query: 34 FVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIII 153
FVGDG F+ + EFL +L E+ G++V +TP+ + + +
Sbjct: 397 FVGDGEFEKKAGEFLQGQL-EENLEGLKVNITPVPANVFM 435
>UniRef50_UPI0000DA2268 Cluster: PREDICTED: hypothetical protein;
n=2; Rattus norvegicus|Rep: PREDICTED: hypothetical
protein - Rattus norvegicus
Length = 328
Score = 34.3 bits (75), Expect = 2.4
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 302 PGRISKIQAYRRSRCTSCLLWCSPFHH 382
PGR +A RRSRC+ C W HH
Sbjct: 240 PGRDWSAEASRRSRCSRCCTWSGDIHH 266
>UniRef50_Q6KI49 Cluster: 30S ribosomal protein S3; n=9;
Mycoplasma|Rep: 30S ribosomal protein S3 - Mycoplasma
mobile
Length = 225
Score = 33.9 bits (74), Expect = 3.1
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 288 LCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG-QRAKSMKFVD 464
L AI AE + KL R A +R M+SGA+G + VSG+L G A+S + +
Sbjct: 115 LNAIILAEQIAIKLENRAPFRVAQKFAIRNAMKSGAKGIKTQVSGRLNGVDMARSEGYSE 174
Query: 465 GLM 473
G M
Sbjct: 175 GEM 177
>UniRef50_Q9XDW7 Cluster: PsbAa; n=1; Rhodopseudomonas
palustris|Rep: PsbAa - Rhodopseudomonas palustris
Length = 403
Score = 29.1 bits (62), Expect(2) = 4.8
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +3
Query: 243 RAICELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGA--RGCEVVV 416
R + L KVA L I A +LR +LI G V GV+ + + A RGCEV +
Sbjct: 115 RRLAALEGTKVAVHYLRGIDDALTLRPQLIEGHRVALVGGGVIGLEVAAAALSRGCEVTI 174
Score = 23.0 bits (47), Expect(2) = 4.8
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +3
Query: 396 RGCEVVVSGKLRGQRAKSMKFVDGLMI 476
RG ++ +L GQ+ S+ DG ++
Sbjct: 201 RGAAILCKAELSGQQTHSLTLADGRVV 227
>UniRef50_Q3EBB8 Cluster: Uncharacterized protein At3g06190.2; n=1;
Arabidopsis thaliana|Rep: Uncharacterized protein
At3g06190.2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 295
Score = 33.1 bits (72), Expect = 5.5
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -3
Query: 213 SELTDSASFLSEHTLCPGGHNNDLRADGSD 124
SEL + + LSEH+L GH +L ADG D
Sbjct: 255 SELLEYVARLSEHSLTSSGHRKELFADGCD 284
>UniRef50_UPI0000F1F8B1 Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 499
Score = 32.7 bits (71), Expect = 7.3
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = +2
Query: 26 SENLLEMGFSRQNSMS--SSLGSWPRTATPAW-KCGSLPSARRSLLWPPGHRVCSERKDA 196
S ++ SR NS+ SS R + W +C L RR+LLW PG VC R+D
Sbjct: 218 SVQFMDYKASRSNSVETHSSERRLQRNPSSEWCECEDLLLRRRALLWRPGGSVC-VREDE 276
Query: 197 ESVSS 211
S S
Sbjct: 277 SSPDS 281
>UniRef50_A6EHQ8 Cluster: 30S ribosomal protein S3; n=1; Pedobacter
sp. BAL39|Rep: 30S ribosomal protein S3 - Pedobacter sp.
BAL39
Length = 281
Score = 32.7 bits (71), Expect = 7.3
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +3
Query: 306 AESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG-QRAKSMKFVDG-LMIH 479
AE + +L ++ RRA + M GA G +++ SG+L G + A+S ++ +G + +H
Sbjct: 116 AEGVAKQLEARISFRRAMKSTIAATMRMGAEGIKIMTSGRLGGAEMARSEQYKEGRIPLH 175
Query: 480 SGDPCNDY 503
+ DY
Sbjct: 176 TFRADIDY 183
>UniRef50_Q5SCB4 Cluster: Cyclin H; n=2; Ostreococcus|Rep: Cyclin H
- Ostreococcus tauri
Length = 322
Score = 32.7 bits (71), Expect = 7.3
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Frame = +3
Query: 330 IGGLAVRRACYGVLR----FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMI 476
+ GL R CYG R F+M+ GC+ S +L R K++ VD LM+
Sbjct: 146 LSGLKFRLVCYGATRPLDGFLMDVEDGGCKGATSKQLIECRKKALDIVDRLML 198
>UniRef50_Q9VWU0 Cluster: CG15046-PA; n=2; Sophophora|Rep:
CG15046-PA - Drosophila melanogaster (Fruit fly)
Length = 494
Score = 32.7 bits (71), Expect = 7.3
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 11 TIFQRSENLLEMGFSRQNSMSSSLGSWPRTATPAWKCGSLPS 136
T QRS +L+ +G+ + L P P W CG LP+
Sbjct: 364 TRLQRSGSLVAVGWGKGEDTDCPLFEMPMRLRPTWACGDLPN 405
>UniRef50_Q5XIY2 Cluster: Transmembrane protein 56; n=8;
Euteleostomi|Rep: Transmembrane protein 56 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 264
Score = 32.7 bits (71), Expect = 7.3
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +3
Query: 357 CYGVLRFI-MESGARGCEVVVSGKLRGQRAKSMK 455
C +L I M ARGC V++GKL+G++A S K
Sbjct: 222 CLDILNIIWMYKIARGCYKVITGKLKGRKADSKK 255
>UniRef50_Q04G79 Cluster: 30S ribosomal protein S3; n=1; Oenococcus
oeni PSU-1|Rep: 30S ribosomal protein S3 - Oenococcus
oeni (strain BAA-331 / PSU-1)
Length = 267
Score = 32.7 bits (71), Expect = 7.3
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +3
Query: 339 LAVRRACYGVLRFIMESGARGCEVVVSGKLRG-QRAKSMKFVDG 467
+A RRA G ++ + +GA+G +VSG+L G A+ ++ +G
Sbjct: 135 VAFRRAMRGAIQRVQRAGAKGVRTMVSGRLNGADIARKEQYTEG 178
>UniRef50_UPI0000DD794E Cluster: PREDICTED: hypothetical protein;
n=2; Homo/Pan/Gorilla group|Rep: PREDICTED: hypothetical
protein - Homo sapiens
Length = 324
Score = 32.3 bits (70), Expect = 9.6
Identities = 21/59 (35%), Positives = 28/59 (47%)
Frame = +2
Query: 26 SENLLEMGFSRQNSMSSSLGSWPRTATPAWKCGSLPSARRSLLWPPGHRVCSERKDAES 202
S LL+MG R ++ + G PR C PS R S + PPG RVC + D +
Sbjct: 215 SRCLLQMGSLRLAAVWAFAG--PRRFCGVLGCVCSPSGRGSRIRPPGRRVCPKLGDGRA 271
>UniRef50_A5TX95 Cluster: Triacylglycerol lipase; n=3; Fusobacterium
nucleatum|Rep: Triacylglycerol lipase - Fusobacterium
nucleatum subsp. polymorphum ATCC 10953
Length = 261
Score = 32.3 bits (70), Expect = 9.6
Identities = 21/85 (24%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Frame = +1
Query: 10 NNISKKRKFVGDGVFKAELN-EFLTRELAEDGYSGVEVRVTPIRSEIIIMATR-TQSVLG 183
+ I K +G++ E F+ +LAEDGYS V ++ + +I M + ++
Sbjct: 39 DKIEKDIVITFNGIYGYEKQLRFIDEKLAEDGYSVVNIQYPTVDDKIAEMTDKYIVPIID 98
Query: 184 EKGRRIRELTSVVQKRFNIPEQSVN 258
E ++ ++ ++ +K N+PE +N
Sbjct: 99 EHVEKLNKI-NLERKAKNLPELRIN 122
>UniRef50_Q9U982 Cluster: Drosophila dodeca-satellite protein 1;
n=9; Endopterygota|Rep: Drosophila dodeca-satellite
protein 1 - Drosophila melanogaster (Fruit fly)
Length = 1301
Score = 32.3 bits (70), Expect = 9.6
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 127 TPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQS 252
T ++ + + +LG+ G+R+RE+ V R NIP QS
Sbjct: 167 TQASRQVTVPREHFRVILGKGGQRLREIERVTATRINIPSQS 208
>UniRef50_Q20F10 Cluster: Chloroplast 30S ribosomal protein S3; n=2;
Chlorophyta|Rep: Chloroplast 30S ribosomal protein S3 -
Oltmannsiellopsis viridis (Marine flagellate)
Length = 235
Score = 32.3 bits (70), Expect = 9.6
Identities = 23/74 (31%), Positives = 34/74 (45%)
Frame = +3
Query: 213 FRSTEAIQHSRAICELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESG 392
FR+ + + + L V + AI AE L +L +A RRA VL I
Sbjct: 103 FRAKNGVSPTAKVA-LQVTTVQNKSSEAIVIAEFLVNQLERRIAFRRALRRVLSIIQRDR 161
Query: 393 ARGCEVVVSGKLRG 434
+G ++ VSG+L G
Sbjct: 162 VQGAKIQVSGRLNG 175
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 606,573,855
Number of Sequences: 1657284
Number of extensions: 11649686
Number of successful extensions: 32415
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 31457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32398
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45221970467
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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