Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10805
(620 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3 prot... 200 2e-51
U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3 prot... 200 2e-51
U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3 prot... 200 2e-51
S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein prot... 200 2e-51
BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3 pr... 200 2e-51
BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3 pr... 200 2e-51
BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3 pr... 200 2e-51
BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for IM... 200 2e-51
BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for IM... 200 2e-51
BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3 pr... 200 2e-51
AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3 pr... 200 2e-51
AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3 pr... 200 2e-51
AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3 va... 199 7e-51
X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRN... 198 1e-50
AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3 pr... 198 1e-50
BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for IM... 167 2e-41
L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3 prot... 145 1e-34
BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein. 145 1e-34
AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protei... 117 3e-26
>U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 200 bits (489), Expect = 2e-51
Identities = 99/122 (81%), Positives = 102/122 (83%)
Frame = +3
Query: 255 ELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG 434
ELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRG
Sbjct: 85 ELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRG 144
Query: 435 QRAKSMKFVDGLMIHSGDPCNDYVKLLPDMCFSDKEY*AIKVKIMLPWDQQGKNGPKKPQ 614
QRAKSMKFVDGLMIHSGDP N YV + IKVKIMLPWD GK GPKKP
Sbjct: 145 QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPL 204
Query: 615 PD 620
PD
Sbjct: 205 PD 206
Score = 145 bits (351), Expect = 1e-34
Identities = 73/85 (85%), Positives = 78/85 (91%)
Frame = +1
Query: 1 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 180
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 181 GEKGRRIRELTSVVQKRFNIPEQSV 255
GEKGRRIRELT+VVQKRF PE SV
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSV 84
>U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 200 bits (489), Expect = 2e-51
Identities = 99/122 (81%), Positives = 102/122 (83%)
Frame = +3
Query: 255 ELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG 434
ELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRG
Sbjct: 85 ELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRG 144
Query: 435 QRAKSMKFVDGLMIHSGDPCNDYVKLLPDMCFSDKEY*AIKVKIMLPWDQQGKNGPKKPQ 614
QRAKSMKFVDGLMIHSGDP N YV + IKVKIMLPWD GK GPKKP
Sbjct: 145 QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPL 204
Query: 615 PD 620
PD
Sbjct: 205 PD 206
Score = 145 bits (351), Expect = 1e-34
Identities = 73/85 (85%), Positives = 78/85 (91%)
Frame = +1
Query: 1 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 180
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 181 GEKGRRIRELTSVVQKRFNIPEQSV 255
GEKGRRIRELT+VVQKRF PE SV
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSV 84
>U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 200 bits (489), Expect = 2e-51
Identities = 99/122 (81%), Positives = 102/122 (83%)
Frame = +3
Query: 255 ELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG 434
ELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRG
Sbjct: 85 ELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRG 144
Query: 435 QRAKSMKFVDGLMIHSGDPCNDYVKLLPDMCFSDKEY*AIKVKIMLPWDQQGKNGPKKPQ 614
QRAKSMKFVDGLMIHSGDP N YV + IKVKIMLPWD GK GPKKP
Sbjct: 145 QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPL 204
Query: 615 PD 620
PD
Sbjct: 205 PD 206
Score = 145 bits (351), Expect = 1e-34
Identities = 73/85 (85%), Positives = 78/85 (91%)
Frame = +1
Query: 1 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 180
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 181 GEKGRRIRELTSVVQKRFNIPEQSV 255
GEKGRRIRELT+VVQKRF PE SV
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSV 84
>S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein
protein.
Length = 243
Score = 200 bits (489), Expect = 2e-51
Identities = 99/122 (81%), Positives = 102/122 (83%)
Frame = +3
Query: 255 ELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG 434
ELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRG
Sbjct: 85 ELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRG 144
Query: 435 QRAKSMKFVDGLMIHSGDPCNDYVKLLPDMCFSDKEY*AIKVKIMLPWDQQGKNGPKKPQ 614
QRAKSMKFVDGLMIHSGDP N YV + IKVKIMLPWD GK GPKKP
Sbjct: 145 QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPL 204
Query: 615 PD 620
PD
Sbjct: 205 PD 206
Score = 144 bits (348), Expect = 3e-34
Identities = 72/85 (84%), Positives = 78/85 (91%)
Frame = +1
Query: 1 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 180
MAV ISK+RKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKRRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 181 GEKGRRIRELTSVVQKRFNIPEQSV 255
GEKGRRIRELT+VVQKRF PE SV
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSV 84
>BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 200 bits (489), Expect = 2e-51
Identities = 99/122 (81%), Positives = 102/122 (83%)
Frame = +3
Query: 255 ELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG 434
ELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRG
Sbjct: 85 ELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRG 144
Query: 435 QRAKSMKFVDGLMIHSGDPCNDYVKLLPDMCFSDKEY*AIKVKIMLPWDQQGKNGPKKPQ 614
QRAKSMKFVDGLMIHSGDP N YV + IKVKIMLPWD GK GPKKP
Sbjct: 145 QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPL 204
Query: 615 PD 620
PD
Sbjct: 205 PD 206
Score = 145 bits (351), Expect = 1e-34
Identities = 73/85 (85%), Positives = 78/85 (91%)
Frame = +1
Query: 1 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 180
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 181 GEKGRRIRELTSVVQKRFNIPEQSV 255
GEKGRRIRELT+VVQKRF PE SV
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSV 84
>BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 200 bits (489), Expect = 2e-51
Identities = 99/122 (81%), Positives = 102/122 (83%)
Frame = +3
Query: 255 ELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG 434
ELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRG
Sbjct: 85 ELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRG 144
Query: 435 QRAKSMKFVDGLMIHSGDPCNDYVKLLPDMCFSDKEY*AIKVKIMLPWDQQGKNGPKKPQ 614
QRAKSMKFVDGLMIHSGDP N YV + IKVKIMLPWD GK GPKKP
Sbjct: 145 QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPL 204
Query: 615 PD 620
PD
Sbjct: 205 PD 206
Score = 145 bits (351), Expect = 1e-34
Identities = 73/85 (85%), Positives = 78/85 (91%)
Frame = +1
Query: 1 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 180
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 181 GEKGRRIRELTSVVQKRFNIPEQSV 255
GEKGRRIRELT+VVQKRF PE SV
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSV 84
>BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 200 bits (489), Expect = 2e-51
Identities = 99/122 (81%), Positives = 102/122 (83%)
Frame = +3
Query: 255 ELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG 434
ELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRG
Sbjct: 85 ELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRG 144
Query: 435 QRAKSMKFVDGLMIHSGDPCNDYVKLLPDMCFSDKEY*AIKVKIMLPWDQQGKNGPKKPQ 614
QRAKSMKFVDGLMIHSGDP N YV + IKVKIMLPWD GK GPKKP
Sbjct: 145 QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPL 204
Query: 615 PD 620
PD
Sbjct: 205 PD 206
Score = 145 bits (351), Expect = 1e-34
Identities = 73/85 (85%), Positives = 78/85 (91%)
Frame = +1
Query: 1 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 180
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 181 GEKGRRIRELTSVVQKRFNIPEQSV 255
GEKGRRIRELT+VVQKRF PE SV
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSV 84
>BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for
IMAGE:4347401) protein.
Length = 242
Score = 200 bits (489), Expect = 2e-51
Identities = 99/122 (81%), Positives = 102/122 (83%)
Frame = +3
Query: 255 ELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG 434
ELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRG
Sbjct: 84 ELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRG 143
Query: 435 QRAKSMKFVDGLMIHSGDPCNDYVKLLPDMCFSDKEY*AIKVKIMLPWDQQGKNGPKKPQ 614
QRAKSMKFVDGLMIHSGDP N YV + IKVKIMLPWD GK GPKKP
Sbjct: 144 QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPL 203
Query: 615 PD 620
PD
Sbjct: 204 PD 205
Score = 144 bits (349), Expect = 2e-34
Identities = 70/80 (87%), Positives = 75/80 (93%)
Frame = +1
Query: 16 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 195
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 4 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 63
Query: 196 RIRELTSVVQKRFNIPEQSV 255
RIRELT+VVQKRF PE SV
Sbjct: 64 RIRELTAVVQKRFGFPEGSV 83
>BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for
IMAGE:3544292) protein.
Length = 242
Score = 200 bits (489), Expect = 2e-51
Identities = 99/122 (81%), Positives = 102/122 (83%)
Frame = +3
Query: 255 ELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG 434
ELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRG
Sbjct: 84 ELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRG 143
Query: 435 QRAKSMKFVDGLMIHSGDPCNDYVKLLPDMCFSDKEY*AIKVKIMLPWDQQGKNGPKKPQ 614
QRAKSMKFVDGLMIHSGDP N YV + IKVKIMLPWD GK GPKKP
Sbjct: 144 QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPL 203
Query: 615 PD 620
PD
Sbjct: 204 PD 205
Score = 144 bits (349), Expect = 2e-34
Identities = 70/80 (87%), Positives = 75/80 (93%)
Frame = +1
Query: 16 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 195
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 4 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 63
Query: 196 RIRELTSVVQKRFNIPEQSV 255
RIRELT+VVQKRF PE SV
Sbjct: 64 RIRELTAVVQKRFGFPEGSV 83
>BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 200 bits (489), Expect = 2e-51
Identities = 99/122 (81%), Positives = 102/122 (83%)
Frame = +3
Query: 255 ELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG 434
ELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRG
Sbjct: 85 ELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRG 144
Query: 435 QRAKSMKFVDGLMIHSGDPCNDYVKLLPDMCFSDKEY*AIKVKIMLPWDQQGKNGPKKPQ 614
QRAKSMKFVDGLMIHSGDP N YV + IKVKIMLPWD GK GPKKP
Sbjct: 145 QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPL 204
Query: 615 PD 620
PD
Sbjct: 205 PD 206
Score = 145 bits (351), Expect = 1e-34
Identities = 73/85 (85%), Positives = 78/85 (91%)
Frame = +1
Query: 1 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 180
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 181 GEKGRRIRELTSVVQKRFNIPEQSV 255
GEKGRRIRELT+VVQKRF PE SV
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSV 84
>AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 200 bits (489), Expect = 2e-51
Identities = 99/122 (81%), Positives = 102/122 (83%)
Frame = +3
Query: 255 ELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG 434
ELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRG
Sbjct: 85 ELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRG 144
Query: 435 QRAKSMKFVDGLMIHSGDPCNDYVKLLPDMCFSDKEY*AIKVKIMLPWDQQGKNGPKKPQ 614
QRAKSMKFVDGLMIHSGDP N YV + IKVKIMLPWD GK GPKKP
Sbjct: 145 QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPL 204
Query: 615 PD 620
PD
Sbjct: 205 PD 206
Score = 145 bits (351), Expect = 1e-34
Identities = 73/85 (85%), Positives = 78/85 (91%)
Frame = +1
Query: 1 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 180
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 181 GEKGRRIRELTSVVQKRFNIPEQSV 255
GEKGRRIRELT+VVQKRF PE SV
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSV 84
>AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 200 bits (489), Expect = 2e-51
Identities = 99/122 (81%), Positives = 102/122 (83%)
Frame = +3
Query: 255 ELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG 434
ELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRG
Sbjct: 85 ELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRG 144
Query: 435 QRAKSMKFVDGLMIHSGDPCNDYVKLLPDMCFSDKEY*AIKVKIMLPWDQQGKNGPKKPQ 614
QRAKSMKFVDGLMIHSGDP N YV + IKVKIMLPWD GK GPKKP
Sbjct: 145 QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPL 204
Query: 615 PD 620
PD
Sbjct: 205 PD 206
Score = 145 bits (351), Expect = 1e-34
Identities = 73/85 (85%), Positives = 78/85 (91%)
Frame = +1
Query: 1 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 180
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 181 GEKGRRIRELTSVVQKRFNIPEQSV 255
GEKGRRIRELT+VVQKRF PE SV
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSV 84
>AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3
variant protein.
Length = 243
Score = 199 bits (485), Expect = 7e-51
Identities = 98/122 (80%), Positives = 102/122 (83%)
Frame = +3
Query: 255 ELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG 434
ELYAE+VATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRG
Sbjct: 85 ELYAEEVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRG 144
Query: 435 QRAKSMKFVDGLMIHSGDPCNDYVKLLPDMCFSDKEY*AIKVKIMLPWDQQGKNGPKKPQ 614
QRAKSMKFVDGLMIHSGDP N YV + IKVKIMLPWD GK GPKKP
Sbjct: 145 QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPL 204
Query: 615 PD 620
PD
Sbjct: 205 PD 206
Score = 145 bits (351), Expect = 1e-34
Identities = 73/85 (85%), Positives = 78/85 (91%)
Frame = +1
Query: 1 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 180
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 181 GEKGRRIRELTSVVQKRFNIPEQSV 255
GEKGRRIRELT+VVQKRF PE SV
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSV 84
>X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRNA
for 40S ribosomal protein s3. ).
Length = 243
Score = 198 bits (484), Expect = 1e-50
Identities = 98/122 (80%), Positives = 101/122 (82%)
Frame = +3
Query: 255 ELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG 434
ELYAEKVATRGLCAIAQAE LRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRG
Sbjct: 85 ELYAEKVATRGLCAIAQAECLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRG 144
Query: 435 QRAKSMKFVDGLMIHSGDPCNDYVKLLPDMCFSDKEY*AIKVKIMLPWDQQGKNGPKKPQ 614
QRAKSMKFVDGLMIHSGDP N YV + IKVKIMLPWD GK GPKKP
Sbjct: 145 QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPL 204
Query: 615 PD 620
PD
Sbjct: 205 PD 206
Score = 145 bits (351), Expect = 1e-34
Identities = 73/85 (85%), Positives = 78/85 (91%)
Frame = +1
Query: 1 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 180
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 181 GEKGRRIRELTSVVQKRFNIPEQSV 255
GEKGRRIRELT+VVQKRF PE SV
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSV 84
>AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3
protein.
Length = 158
Score = 198 bits (484), Expect = 1e-50
Identities = 98/121 (80%), Positives = 101/121 (83%)
Frame = +3
Query: 258 LYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQ 437
LYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQ
Sbjct: 1 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 60
Query: 438 RAKSMKFVDGLMIHSGDPCNDYVKLLPDMCFSDKEY*AIKVKIMLPWDQQGKNGPKKPQP 617
RAKSMKFVDGLMIHSGDP N YV + IKVKIMLPWD GK GPKKP P
Sbjct: 61 RAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLP 120
Query: 618 D 620
D
Sbjct: 121 D 121
>BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for
IMAGE:40134452) protein.
Length = 133
Score = 167 bits (407), Expect = 2e-41
Identities = 80/84 (95%), Positives = 82/84 (97%)
Frame = +3
Query: 255 ELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG 434
ELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRG
Sbjct: 29 ELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRG 88
Query: 435 QRAKSMKFVDGLMIHSGDPCNDYV 506
QRAKSMKFVDGLMIHSGDP N YV
Sbjct: 89 QRAKSMKFVDGLMIHSGDPVNYYV 112
Score = 39.5 bits (88), Expect = 0.009
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +1
Query: 187 KGRRIRELTSVVQKRFNIPEQSV 255
+GRRIRELT+VVQKRF PE SV
Sbjct: 6 QGRRIRELTAVVQKRFGFPEGSV 28
>L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3
protein.
Length = 95
Score = 145 bits (351), Expect = 1e-34
Identities = 73/85 (85%), Positives = 78/85 (91%)
Frame = +1
Query: 1 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 180
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 181 GEKGRRIRELTSVVQKRFNIPEQSV 255
GEKGRRIRELT+VVQKRF PE SV
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSV 84
>BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein.
Length = 117
Score = 145 bits (351), Expect = 1e-34
Identities = 73/85 (85%), Positives = 78/85 (91%)
Frame = +1
Query: 1 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 180
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 181 GEKGRRIRELTSVVQKRFNIPEQSV 255
GEKGRRIRELT+VVQKRF PE SV
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSV 84
Score = 67.7 bits (158), Expect = 3e-11
Identities = 32/33 (96%), Positives = 33/33 (100%)
Frame = +3
Query: 255 ELYAEKVATRGLCAIAQAESLRYKLIGGLAVRR 353
ELYAEKVATRGLCAIAQAESLRYKL+GGLAVRR
Sbjct: 85 ELYAEKVATRGLCAIAQAESLRYKLLGGLAVRR 117
>AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protein
S3 protein.
Length = 117
Score = 117 bits (282), Expect = 3e-26
Identities = 58/80 (72%), Positives = 60/80 (75%)
Frame = +3
Query: 381 MESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVKLLPDMCFSDKEY*AIKV 560
MESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV + IKV
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 60
Query: 561 KIMLPWDQQGKNGPKKPQPD 620
KIMLPWD GK GPKKP PD
Sbjct: 61 KIMLPWDPTGKIGPKKPLPD 80
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,193,117
Number of Sequences: 237096
Number of extensions: 1838969
Number of successful extensions: 7977
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 7750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7945
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6691573490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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