Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10799X
(376 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P25398 Cluster: 40S ribosomal protein S12; n=129; Eukar... 91 8e-18
UniRef50_Q5B5V7 Cluster: 40S ribosomal protein S12; n=1; Emerice... 84 7e-16
UniRef50_A2YI73 Cluster: 40S ribosomal protein S12; n=5; Oryza s... 82 4e-15
UniRef50_Q201W7 Cluster: 40S ribosomal protein S12; n=1; Acyrtho... 76 2e-13
UniRef50_Q9SKZ3 Cluster: 40S ribosomal protein S12-2; n=3; Magno... 71 7e-12
UniRef50_Q5DE28 Cluster: 40S ribosomal protein S12; n=2; Platyhe... 70 2e-11
UniRef50_Q8IGF9 Cluster: RH29995p; n=2; Drosophila melanogaster|... 69 3e-11
UniRef50_Q5CFW0 Cluster: 40S ribosomal protein S12; n=4; Apicomp... 67 9e-11
UniRef50_Q54PX9 Cluster: 40S ribosomal protein S12; n=1; Dictyos... 67 1e-10
UniRef50_O97249 Cluster: 40S ribosomal protein S12; n=5; Plasmod... 60 1e-08
UniRef50_P48589 Cluster: 40S ribosomal protein S12; n=13; Saccha... 57 9e-08
UniRef50_Q03253 Cluster: 40S ribosomal protein S12; n=10; Trypan... 56 2e-07
UniRef50_A0EEB1 Cluster: 40S ribosomal protein S12; n=7; Paramec... 52 3e-06
UniRef50_Q22W26 Cluster: 40S ribosomal protein S12; n=1; Tetrahy... 52 5e-06
UniRef50_A7AM93 Cluster: 40S ribosomal protein S12, putative; n=... 51 6e-06
UniRef50_Q7R1B2 Cluster: GLP_306_61647_62024; n=1; Giardia lambl... 46 2e-04
UniRef50_A0C845 Cluster: Chromosome undetermined scaffold_157, w... 44 0.001
UniRef50_UPI0000D633F9 Cluster: UPI0000D633F9 related cluster; n... 41 0.009
UniRef50_UPI00004982F0 Cluster: 40S ribosomal protein S12; n=3; ... 38 0.060
UniRef50_Q3LWI8 Cluster: Ribosomal protein S12; n=1; Bigelowiell... 36 0.18
UniRef50_Q9ABP5 Cluster: General secretion pathway protein L, pu... 35 0.56
UniRef50_Q3W1D8 Cluster: Catalytic domain of components of vario... 34 0.98
UniRef50_Q3SAE1 Cluster: Ribosomal protein L7A; n=2; Naegleria g... 34 0.98
UniRef50_Q2NF97 Cluster: Putative uncharacterized protein; n=1; ... 33 2.3
UniRef50_Q8GZ45 Cluster: Probable threonyl-tRNA synthetase, cyto... 32 3.0
UniRef50_P24522 Cluster: Growth arrest and DNA-damage-inducible ... 32 3.0
UniRef50_Q1X873 Cluster: Fanconi anemia B; n=3; Danio rerio|Rep:... 32 3.9
UniRef50_A7AQR9 Cluster: Membrane protein, putative; n=1; Babesi... 32 3.9
UniRef50_UPI0000EBE800 Cluster: PREDICTED: hypothetical protein;... 31 5.2
UniRef50_Q1IJ83 Cluster: Two component transcriptional regulator... 31 5.2
UniRef50_A3S4U4 Cluster: Putative uncharacterized protein; n=1; ... 31 5.2
UniRef50_Q5U3D7 Cluster: Zgc:103699; n=2; Danio rerio|Rep: Zgc:1... 31 6.9
UniRef50_Q2MFW1 Cluster: KanG; n=3; Streptomyces kanamyceticus|R... 31 6.9
UniRef50_Q6H667 Cluster: Thylakoid lumenal protein-like; n=3; Vi... 31 6.9
UniRef50_Q21ZI9 Cluster: Phage Gp37Gp68; n=5; Bacteria|Rep: Phag... 31 9.1
UniRef50_A7HWJ2 Cluster: Putative uncharacterized protein; n=1; ... 31 9.1
UniRef50_A3V268 Cluster: Flagellar proximal rod protein FlgB; n=... 31 9.1
UniRef50_Q4CL93 Cluster: Putative uncharacterized protein; n=1; ... 31 9.1
>UniRef50_P25398 Cluster: 40S ribosomal protein S12; n=129;
Eukaryota|Rep: 40S ribosomal protein S12 - Homo sapiens
(Human)
Length = 132
Score = 90.6 bits (215), Expect = 8e-18
Identities = 47/80 (58%), Positives = 54/80 (67%)
Frame = +3
Query: 60 ILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCGEAAYKKLV 239
I +G MDVN ALQEVLKTALIH GL G+ EAAKALDKRQA LCV A NC E Y KLV
Sbjct: 6 IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVQASNCDEPMYVKLV 65
Query: 240 QALCNNIRFHWSRLTTTKSL 299
+AL + + ++ K L
Sbjct: 66 EALLAEHQINLIKVDDNKKL 85
Score = 74.1 bits (174), Expect = 7e-13
Identities = 29/39 (74%), Positives = 35/39 (89%)
Frame = +2
Query: 254 QHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCV 370
+HQI L+KVD+NKKLGEW GLCKID++G RK+VGCSCV
Sbjct: 71 EHQINLIKVDDNKKLGEWVGLCKIDREGNPRKVVGCSCV 109
>UniRef50_Q5B5V7 Cluster: 40S ribosomal protein S12; n=1; Emericella
nidulans|Rep: 40S ribosomal protein S12 - Emericella
nidulans (Aspergillus nidulans)
Length = 183
Score = 84.2 bits (199), Expect = 7e-16
Identities = 47/84 (55%), Positives = 56/84 (66%)
Frame = +3
Query: 3 DSQIVTTMADVEVEVPTNPILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQ 182
++Q +A EVEVP +G M V AL+ VL+ ALIH GL GL EAAKALD+RQ
Sbjct: 6 ETQSNPPVAAEEVEVPAESG-AGGQMSVLDALKGVLRIALIHDGLARGLREAAKALDRRQ 64
Query: 183 AVLCVLAENCGEAAYKKLVQALCN 254
A +CVL E C E AYKKLV ALC+
Sbjct: 65 AHMCVLNEGCEEEAYKKLVVALCS 88
Score = 39.1 bits (87), Expect(2) = 1e-05
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +2
Query: 254 QHQIPLVKVDNNKKLGEWAGLC 319
+H+IPL+KV + K LGEW GLC
Sbjct: 89 EHKIPLIKVPDGKMLGEWVGLC 110
Score = 30.7 bits (66), Expect(2) = 1e-05
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +2
Query: 320 KIDKDGKARKIVGCSCV 370
++D++G ARK+V CSCV
Sbjct: 144 QLDREGNARKVVNCSCV 160
>UniRef50_A2YI73 Cluster: 40S ribosomal protein S12; n=5; Oryza
sativa|Rep: 40S ribosomal protein S12 - Oryza sativa
subsp. indica (Rice)
Length = 156
Score = 81.8 bits (193), Expect = 4e-15
Identities = 42/90 (46%), Positives = 56/90 (62%)
Frame = +3
Query: 30 DVEVEVPTNPILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAEN 209
+ +E P P+L G MD+ ALQ V+K + H GLV GL EAAKA++K A LCVLAE+
Sbjct: 4 ETPIETPAAPVL-GEPMDLMTALQLVMKKSSAHDGLVKGLREAAKAIEKHAAQLCVLAED 62
Query: 210 CGEAAYKKLVQALCNNIRFHWSRLTTTKSL 299
C + Y KLV+ALC H + + K+L
Sbjct: 63 CDQPDYVKLVKALCAEHNVHLVTVPSAKTL 92
Score = 48.0 bits (109), Expect = 6e-05
Identities = 27/57 (47%), Positives = 32/57 (56%), Gaps = 18/57 (31%)
Frame = +2
Query: 254 QHQIPLVKVDNNKKLGEWAGL------------------CKIDKDGKARKIVGCSCV 370
+H + LV V + K LGEWAGL CKID +GKARK+VGCSCV
Sbjct: 78 EHNVHLVTVPSAKTLGEWAGLYEKPSCPGFNNTYCHSQLCKIDSEGKARKVVGCSCV 134
>UniRef50_Q201W7 Cluster: 40S ribosomal protein S12; n=1;
Acyrthosiphon pisum|Rep: 40S ribosomal protein S12 -
Acyrthosiphon pisum (Pea aphid)
Length = 136
Score = 75.8 bits (178), Expect = 2e-13
Identities = 39/76 (51%), Positives = 50/76 (65%)
Frame = +3
Query: 24 MADVEVEVPTNPILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLA 203
M+DVE V G + ++ L+EVLK A ++G L+HG+HE KAL+K+ VLCVLA
Sbjct: 1 MSDVEDAVEV-----GEHGEMYNLLKEVLKNAQVNGSLLHGIHEGTKALEKKLGVLCVLA 55
Query: 204 ENCGEAAYKKLVQALC 251
NC EA YKKLV LC
Sbjct: 56 NNCEEAMYKKLVTGLC 71
Score = 67.7 bits (158), Expect = 6e-11
Identities = 26/44 (59%), Positives = 36/44 (81%)
Frame = +2
Query: 239 SGSVQQHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCV 370
+G ++ PL++VD+NK LGEW+GLCK D +G+ARK+VGCSCV
Sbjct: 68 TGLCAENSTPLIEVDSNKTLGEWSGLCKYDNNGQARKVVGCSCV 111
>UniRef50_Q9SKZ3 Cluster: 40S ribosomal protein S12-2; n=3;
Magnoliophyta|Rep: 40S ribosomal protein S12-2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 144
Score = 70.9 bits (166), Expect = 7e-12
Identities = 31/59 (52%), Positives = 45/59 (76%)
Frame = +3
Query: 75 NMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCGEAAYKKLVQALC 251
+MDV+ AL+ ++ + +GG+V GLHE+AK ++KR A LCVLAE+C + Y KLV+ALC
Sbjct: 24 DMDVSTALELTVRKSRAYGGVVRGLHESAKLIEKRNAQLCVLAEDCNQPDYVKLVKALC 82
Score = 62.1 bits (144), Expect = 3e-09
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = +2
Query: 257 HQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVGI 376
H I L+ V + K LGEWAGLCKID +G ARK+VGCSC+ I
Sbjct: 85 HSIKLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCSCLVI 124
>UniRef50_Q5DE28 Cluster: 40S ribosomal protein S12; n=2;
Platyhelminthes|Rep: 40S ribosomal protein S12 -
Schistosoma japonicum (Blood fluke)
Length = 131
Score = 69.7 bits (163), Expect = 2e-11
Identities = 28/39 (71%), Positives = 34/39 (87%)
Frame = +2
Query: 254 QHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCV 370
+H IPLVKV +NKKLGEW+GLCK DK+GKARK+V SC+
Sbjct: 65 EHGIPLVKVPDNKKLGEWSGLCKYDKEGKARKVVSASCI 103
Score = 64.9 bits (151), Expect = 5e-10
Identities = 28/59 (47%), Positives = 42/59 (71%)
Frame = +3
Query: 78 MDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCGEAAYKKLVQALCN 254
MD++ A+Q+VLK A+ G+ GL++ K +++R VLC LA+NC E AY L++ALCN
Sbjct: 6 MDLDSAVQQVLKNAVKCRGICRGLNQCTKLIEQRGVVLCFLADNCNEKAYTTLIEALCN 64
>UniRef50_Q8IGF9 Cluster: RH29995p; n=2; Drosophila
melanogaster|Rep: RH29995p - Drosophila melanogaster
(Fruit fly)
Length = 127
Score = 68.9 bits (161), Expect = 3e-11
Identities = 34/53 (64%), Positives = 43/53 (81%), Gaps = 1/53 (1%)
Frame = +3
Query: 21 TMADVEVEVPTN-PILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDK 176
TMADV+V+VP+ P+L G MD+N ALQEVLK +LI GL+HG+H+A KALDK
Sbjct: 16 TMADVDVDVPSAAPVLDGA-MDINTALQEVLKKSLIADGLIHGIHQACKALDK 67
>UniRef50_Q5CFW0 Cluster: 40S ribosomal protein S12; n=4;
Apicomplexa|Rep: 40S ribosomal protein S12 -
Cryptosporidium hominis
Length = 143
Score = 67.3 bits (157), Expect = 9e-11
Identities = 32/78 (41%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Frame = +3
Query: 24 MADVEVEVPTNPILSGNNM--DVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCV 197
M+DVE++ + + D+ A++ VLK + + GGL+ GL+E ALD ++A +C
Sbjct: 1 MSDVEIDQEGTQVQVEQEVVNDLTTAIRYVLKNSFVRGGLLRGLNEVVLALDSKKAQVCF 60
Query: 198 LAENCGEAAYKKLVQALC 251
LAE+C E YK+LV+ALC
Sbjct: 61 LAESCEEDCYKQLVEALC 78
Score = 52.4 bits (120), Expect = 3e-06
Identities = 21/42 (50%), Positives = 32/42 (76%)
Frame = +2
Query: 251 QQHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVGI 376
++ IPL+ V ++K+LGE AGLCK+D++G RK+VG + V I
Sbjct: 79 RERGIPLIMVPDSKELGEMAGLCKVDREGNPRKVVGAASVAI 120
>UniRef50_Q54PX9 Cluster: 40S ribosomal protein S12; n=1;
Dictyostelium discoideum AX4|Rep: 40S ribosomal protein
S12 - Dictyostelium discoideum AX4
Length = 136
Score = 66.9 bits (156), Expect = 1e-10
Identities = 35/68 (51%), Positives = 45/68 (66%), Gaps = 4/68 (5%)
Frame = +3
Query: 57 PILSGN----NMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCGEAA 224
P+++ N N D VALQ+V+K +L G+ GLHE KALDKR A LCVLA NC E
Sbjct: 6 PVIAANPLEKNTDPMVALQKVIKESLAVQGVARGLHETVKALDKRTARLCVLASNCDEPN 65
Query: 225 YKKLVQAL 248
+ +LV+AL
Sbjct: 66 FVRLVKAL 73
Score = 62.9 bits (146), Expect = 2e-09
Identities = 26/41 (63%), Positives = 33/41 (80%)
Frame = +2
Query: 254 QHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVGI 376
+H IPL++V +NK LGEWAGLCK+DKD ARK+V CS + I
Sbjct: 76 EHNIPLIEVPDNKALGEWAGLCKLDKDLAARKVVACSTLVI 116
>UniRef50_O97249 Cluster: 40S ribosomal protein S12; n=5;
Plasmodium|Rep: 40S ribosomal protein S12 - Plasmodium
falciparum (isolate 3D7)
Length = 141
Score = 60.1 bits (139), Expect = 1e-08
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = +3
Query: 24 MADVEVEVPTNPILSGNNMDVNV-ALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVL 200
M+DVE N ++ + NV A+Q+V+K A +H GL G+ E K+++ ++A +C L
Sbjct: 1 MSDVE-SADNNVVVEEKAVFDNVTAIQKVIKNAHVHDGLKIGIREVIKSIESQEAKVCFL 59
Query: 201 AENCGEAAYKKLVQALC 251
++ C E AYKKL+ LC
Sbjct: 60 SDVCSEPAYKKLITTLC 76
Score = 48.4 bits (110), Expect = 4e-05
Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +2
Query: 254 QHQIPLVKVDNNKK-LGEWAGLCKIDKDGKARKIVGCSCVGI 376
+ IPL V N+ K LG WAGL K+D +G ARKI+G S V +
Sbjct: 78 EKNIPLFMVQNDSKDLGHWAGLFKLDNEGNARKIIGASSVAV 119
>UniRef50_P48589 Cluster: 40S ribosomal protein S12; n=13;
Saccharomycetales|Rep: 40S ribosomal protein S12 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 143
Score = 57.2 bits (132), Expect = 9e-08
Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Frame = +3
Query: 24 MADVE--VEVPTNPILSGN-NMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLC 194
M+DVE VEV ++ + + AL+ VL+TAL+H GL GL E+ KAL + +A+L
Sbjct: 1 MSDVEEVVEVQEETVVEQTAEVTIEDALKVVLRTALVHDGLARGLRESTKALTRGEALLV 60
Query: 195 VLAENCGEAAYKKLVQALCNN 257
VL + EA KLV+ L N+
Sbjct: 61 VLVSSVTEANIIKLVEGLAND 81
Score = 56.0 bits (129), Expect = 2e-07
Identities = 23/39 (58%), Positives = 33/39 (84%)
Frame = +2
Query: 254 QHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCV 370
++++PL+KV + K+LGEWAGL KID++G ARK+VG S V
Sbjct: 83 ENKVPLIKVADAKQLGEWAGLGKIDREGNARKVVGASVV 121
>UniRef50_Q03253 Cluster: 40S ribosomal protein S12; n=10;
Trypanosomatidae|Rep: 40S ribosomal protein S12 -
Trypanosoma brucei brucei
Length = 144
Score = 56.0 bits (129), Expect = 2e-07
Identities = 40/87 (45%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Frame = +3
Query: 93 ALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCGEAAYKKLVQALC--NNIRF 266
AL+ VL A GL+ GL E +ALD+R A LCVLA++C + YKKLV AL NNI
Sbjct: 32 ALRIVLMKARETNGLICGLSEVTRALDRRTAHLCVLADDCEDEEYKKLVTALAKQNNI-- 89
Query: 267 HWSRLTTTKSLENGLVSARLTRMARRG 347
L + E A LTRMA G
Sbjct: 90 ---DLVSMDEREKLAQWAGLTRMAADG 113
Score = 47.2 bits (107), Expect = 1e-04
Identities = 18/42 (42%), Positives = 28/42 (66%)
Frame = +2
Query: 251 QQHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVGI 376
+Q+ I LV +D +KL +WAGL ++ DG RK + CSC+ +
Sbjct: 85 KQNNIDLVSMDEREKLAQWAGLTRMAADGSVRKTLKCSCLAV 126
>UniRef50_A0EEB1 Cluster: 40S ribosomal protein S12; n=7; Paramecium
tetraurelia|Rep: 40S ribosomal protein S12 - Paramecium
tetraurelia
Length = 129
Score = 52.4 bits (120), Expect = 3e-06
Identities = 24/56 (42%), Positives = 36/56 (64%)
Frame = +3
Query: 96 LQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCGEAAYKKLVQALCNNIR 263
L+ V++T+L G L G+HE KA++ +QA VLA++C E YKKL+ AL +
Sbjct: 14 LKRVVQTSLHRGLLAKGVHEVCKAIESKQAKFVVLADDCTEDTYKKLIVALAKQFQ 69
Score = 33.5 bits (73), Expect = 1.3
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +2
Query: 251 QQHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVGI 376
+Q QIP+ KV+ LGEW G+ K K K CS V +
Sbjct: 66 KQFQIPVWKVEKGALLGEWIGISKFLTKTKKIKSRKCSSVAL 107
>UniRef50_Q22W26 Cluster: 40S ribosomal protein S12; n=1;
Tetrahymena thermophila SB210|Rep: 40S ribosomal protein
S12 - Tetrahymena thermophila SB210
Length = 126
Score = 51.6 bits (118), Expect = 5e-06
Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Frame = +3
Query: 63 LSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCGEAAYKKLVQ 242
++ N +N L +V+K++ + GLHE + ++ +QA+ +AE+C + Y KLV+
Sbjct: 1 MADQNQQLNEVLAKVIKSSNCQDAISKGLHEVLRTIEAKQALFVCVAEDCDQGNYVKLVK 60
Query: 243 ALC--NNIRF 266
ALC N I++
Sbjct: 61 ALCAKNEIKY 70
>UniRef50_A7AM93 Cluster: 40S ribosomal protein S12, putative; n=1;
Babesia bovis|Rep: 40S ribosomal protein S12, putative -
Babesia bovis
Length = 167
Score = 51.2 bits (117), Expect = 6e-06
Identities = 21/43 (48%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Frame = +2
Query: 251 QQHQIPLVKVD-NNKKLGEWAGLCKIDKDGKARKIVGCSCVGI 376
++H +P ++ + +++K+GEWAGLCK D +G ARKIVG + V I
Sbjct: 103 KEHGVPCIETEFDSEKIGEWAGLCKYDIEGVARKIVGATSVAI 145
Score = 50.0 bits (114), Expect = 1e-05
Identities = 21/52 (40%), Positives = 34/52 (65%)
Frame = +3
Query: 96 LQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCGEAAYKKLVQALC 251
LQ +L A+ +G L+ G+H+ KA++ + A CV++ E AY KL++ALC
Sbjct: 51 LQRLLHLAMANGCLLRGIHQVTKAIEAKNARACVVSTQTSEEAYLKLIRALC 102
>UniRef50_Q7R1B2 Cluster: GLP_306_61647_62024; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_306_61647_62024 - Giardia lamblia
ATCC 50803
Length = 125
Score = 46.0 bits (104), Expect = 2e-04
Identities = 22/68 (32%), Positives = 36/68 (52%)
Frame = +3
Query: 96 LQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCGEAAYKKLVQALCNNIRFHWS 275
L+E K GLV G + K L++++A +C LA +C E Y +V+ LC + H
Sbjct: 10 LKETFKRIHNMDGLVTGHRQVFKYLERKRAKICFLASDCEEKQYADIVECLCKEYKVHLC 69
Query: 276 RLTTTKSL 299
+ T ++L
Sbjct: 70 KKFTRRTL 77
>UniRef50_A0C845 Cluster: Chromosome undetermined scaffold_157,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_157,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 779
Score = 43.6 bits (98), Expect = 0.001
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +3
Query: 153 EAAKALDKRQAVLCVLAENCGEAAYKKLVQALCNNIRFH-WSRLTTTKSLENGLV-SARL 326
++AKA++ +QA VLA++C E YKKLV AL + W LENGL + L
Sbjct: 52 KSAKAIESKQAKFIVLADDCSEDTYKKLVIALAKQFQIPVWKVEKGVLYLENGLAFQSSL 111
Query: 327 TRMARRGRLSA 359
R R + +A
Sbjct: 112 LRQRRSNQENA 122
>UniRef50_UPI0000D633F9 Cluster: UPI0000D633F9 related cluster; n=1;
Mus musculus|Rep: UPI0000D633F9 UniRef100 entry - Mus
musculus
Length = 132
Score = 40.7 bits (91), Expect = 0.009
Identities = 16/39 (41%), Positives = 26/39 (66%)
Frame = +2
Query: 254 QHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCV 370
+HQI L+K D+ + L EW + D++GK+ K+V C+ V
Sbjct: 71 EHQISLIKDDDKRNLREWGRPLQTDQEGKSNKVVVCNSV 109
Score = 31.9 bits (69), Expect = 3.9
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +3
Query: 60 ILSGNNMDVNVALQEVLKTALIHGG-LVHGLHEAAKALDKRQAVLCVLAENCGEAAYKKL 236
+L + +D+N L +VL A H G LV + A A L NC E Y KL
Sbjct: 6 LLGESKIDINTDLGDVLTYAPSHDGKLVQDTNTAKLPRPSTSAKLS-FPVNCNEPMYVKL 64
Query: 237 VQALC 251
V+A C
Sbjct: 65 VKAHC 69
>UniRef50_UPI00004982F0 Cluster: 40S ribosomal protein S12; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S12 - Entamoeba histolytica HM-1:IMSS
Length = 136
Score = 37.9 bits (84), Expect = 0.060
Identities = 14/52 (26%), Positives = 29/52 (55%)
Frame = +3
Query: 96 LQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCGEAAYKKLVQALC 251
++ +L A L G+ + K ++ ++A+ C +AE+C Y L++A+C
Sbjct: 26 IKAILYQARAQNALTKGIRQCLKVIEAKKALYCFIAEDCDNDKYTGLLKAIC 77
Score = 36.3 bits (80), Expect = 0.18
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 251 QQHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSC 367
++ + +V V +LGEW CKI +DG A +I CSC
Sbjct: 78 KEQGVKIVMVPQKIQLGEWTNQCKI-RDGAAVRIAKCSC 115
>UniRef50_Q3LWI8 Cluster: Ribosomal protein S12; n=1; Bigelowiella
natans|Rep: Ribosomal protein S12 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 110
Score = 36.3 bits (80), Expect = 0.18
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +3
Query: 78 MDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCGEAAYKKLVQALC 251
M + L+ ++K A +V G+ E K + + C+LA+NC + YK ++ LC
Sbjct: 1 MIIEKFLKILIKEATKKNLIVKGIKETIKFIIRGYGYACILAKNCNKKQYKIAIKTLC 58
>UniRef50_Q9ABP5 Cluster: General secretion pathway protein L,
putative; n=1; Caulobacter vibrioides|Rep: General
secretion pathway protein L, putative - Caulobacter
crescentus (Caulobacter vibrioides)
Length = 368
Score = 34.7 bits (76), Expect = 0.56
Identities = 20/55 (36%), Positives = 24/55 (43%)
Frame = -1
Query: 367 TGAADNLPRLAILVNLAETSPFSKLFVVVNLDQWNLMLLHRA*TSFLYAASPQFS 203
TG L RLAIL A SP + + DQW L R T + +PQ S
Sbjct: 214 TGGRGGLRRLAILTAAAVLSPLLLMIAQIAHDQWTARALERQATKLAVSLAPQAS 268
>UniRef50_Q3W1D8 Cluster: Catalytic domain of components of various
dehydrogenase complexes; n=4; Actinomycetales|Rep:
Catalytic domain of components of various dehydrogenase
complexes - Frankia sp. EAN1pec
Length = 294
Score = 33.9 bits (74), Expect = 0.98
Identities = 21/61 (34%), Positives = 29/61 (47%)
Frame = +3
Query: 81 DVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCGEAAYKKLVQALCNNI 260
D N AL+ L+T + H VHG K LD R+ VL + N E + +QA +
Sbjct: 110 DANAALRGGLRTRVAHYPFVHGKLTLDKVLDGRRVVLGTVVPNLHEVGLAE-IQAHLERV 168
Query: 261 R 263
R
Sbjct: 169 R 169
>UniRef50_Q3SAE1 Cluster: Ribosomal protein L7A; n=2; Naegleria
gruberi|Rep: Ribosomal protein L7A - Naegleria gruberi
Length = 258
Score = 33.9 bits (74), Expect = 0.98
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +3
Query: 135 LVHGLHEAAKALDKRQAVLCVLAENCGEAAYKKLVQALCNNI 260
L+HG++E KA++++QA L V+A + + ALC +
Sbjct: 135 LIHGINEVVKAVERKQASLVVIAHDVEPIELVLFLPALCKKL 176
>UniRef50_Q2NF97 Cluster: Putative uncharacterized protein; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: Putative
uncharacterized protein - Methanosphaera stadtmanae
(strain DSM 3091)
Length = 288
Score = 32.7 bits (71), Expect = 2.3
Identities = 20/69 (28%), Positives = 38/69 (55%)
Frame = +3
Query: 33 VEVEVPTNPILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENC 212
V++ V N I+ ++ + ++E++K L ++ + + KAL + VL LA+NC
Sbjct: 103 VKIAVAGN-IIDFGALEESTNMEELIKEQLKRQPSINHIDKLDKALQTAKTVL-YLADNC 160
Query: 213 GEAAYKKLV 239
GE + KL+
Sbjct: 161 GEIVFDKLL 169
>UniRef50_Q8GZ45 Cluster: Probable threonyl-tRNA synthetase,
cytoplasmic; n=2; Arabidopsis thaliana|Rep: Probable
threonyl-tRNA synthetase, cytoplasmic - Arabidopsis
thaliana (Mouse-ear cress)
Length = 458
Score = 32.3 bits (70), Expect = 3.0
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = +3
Query: 168 LDKRQAVLCVLAENCGEAAYKKLVQALCNNIRFHWSRLTTTKSLENGLVSAR 323
L RQA++C L+E+C ++Y K VQ N + ++ + +SL + AR
Sbjct: 355 LSPRQAIVCSLSEDC--SSYAKQVQKQINEVGYYVDIDESDRSLRKKVADAR 404
>UniRef50_P24522 Cluster: Growth arrest and DNA-damage-inducible
protein GADD45 alpha; n=72; Euteleostomi|Rep: Growth
arrest and DNA-damage-inducible protein GADD45 alpha -
Homo sapiens (Human)
Length = 165
Score = 32.3 bits (70), Expect = 3.0
Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +3
Query: 84 VNVALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLA 203
V AL+EVL AL + G++EAAK L D VLC+LA
Sbjct: 19 VGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLA 60
>UniRef50_Q1X873 Cluster: Fanconi anemia B; n=3; Danio rerio|Rep:
Fanconi anemia B - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 807
Score = 31.9 bits (69), Expect = 3.9
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Frame = +3
Query: 156 AAKALDKRQAVLCVLAENCGE--AAYKKLVQALCNNIRFH 269
AA KRQ V CVL C + +A+K ++ ++CN+++ H
Sbjct: 70 AALDQQKRQKVPCVLLRLCKKRASAFKYMLYSICNDLKLH 109
>UniRef50_A7AQR9 Cluster: Membrane protein, putative; n=1; Babesia
bovis|Rep: Membrane protein, putative - Babesia bovis
Length = 1708
Score = 31.9 bits (69), Expect = 3.9
Identities = 24/88 (27%), Positives = 39/88 (44%)
Frame = +3
Query: 72 NNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCGEAAYKKLVQALC 251
+N V + ++ V+ + G H L + K LD ++ CV+ E G K++V+
Sbjct: 665 SNASVPIEIRRVIGVMFVTPGRAHSLWKTHKLLDPKRVKYCVIDEYDGLLQLKRVVK--- 721
Query: 252 NNIRFHWSRLTTTKSLENGLVSARLTRM 335
+T+K LEN V A L M
Sbjct: 722 ----------STSKELENSSVKAVLDAM 739
>UniRef50_UPI0000EBE800 Cluster: PREDICTED: hypothetical protein;
n=2; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 806
Score = 31.5 bits (68), Expect = 5.2
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -2
Query: 222 RLHHSSQPKHIVLLASCQEL*RLREDRAQDHHGLKLSLAPLAV--LHSRPC 76
+L H P + +L SC+ ++RE + HHGLK A V RPC
Sbjct: 252 KLSHCPPPPELRILTSCK---KIRESKTSGHHGLKTFKAGKCVDTWIQRPC 299
>UniRef50_Q1IJ83 Cluster: Two component transcriptional regulator,
LuxR family; n=2; Acidobacteria bacterium Ellin345|Rep:
Two component transcriptional regulator, LuxR family -
Acidobacteria bacterium (strain Ellin345)
Length = 233
Score = 31.5 bits (68), Expect = 5.2
Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 1/117 (0%)
Frame = +3
Query: 12 IVTTMADVEVEVPTNPILSGNNMDVNVALQEVLKTALI-HGGLVHGLHEAAKALDKRQAV 188
+V T A EV +L G +E++ +L H LV H K D+++ V
Sbjct: 122 LVKTSAASEVVASVREVLRGKTYVSPTIPREMIDLSLWQHKKLVDETH---KLTDRQREV 178
Query: 189 LCVLAENCGEAAYKKLVQALCNNIRFHWSRLTTTKSLENGLVSARLTRMARRGRLSA 359
L +LAE G ++ + FH R+ +N +A L + A R R+++
Sbjct: 179 LQLLAEGKGMKEVAAILNMTTRTVAFHKYRIMEVLGTKN---NADLVKYAVRNRMTS 232
>UniRef50_A3S4U4 Cluster: Putative uncharacterized protein; n=1;
Prochlorococcus marinus str. MIT 9211|Rep: Putative
uncharacterized protein - Prochlorococcus marinus str.
MIT 9211
Length = 195
Score = 31.5 bits (68), Expect = 5.2
Identities = 12/36 (33%), Positives = 25/36 (69%)
Frame = +3
Query: 33 VEVEVPTNPILSGNNMDVNVALQEVLKTALIHGGLV 140
+ + +P + +L+G N D+++ L++ LK +I GGL+
Sbjct: 93 ISLNIP-DIVLTGTNYDIDIILEKPLKDGIIAGGLI 127
>UniRef50_Q5U3D7 Cluster: Zgc:103699; n=2; Danio rerio|Rep:
Zgc:103699 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 167
Score = 31.1 bits (67), Expect = 6.9
Identities = 21/70 (30%), Positives = 31/70 (44%)
Frame = +3
Query: 162 KALDKRQAVLCVLAENCGEAAYKKLVQALCNNIRFHWSRLTTTKSLENGLVSARLTRMAR 341
+ LD + VL L + GEA + +++ NN+ RLT KSL+ V
Sbjct: 73 RELDLQGNVLTTLPDAIGEAQHLQIINISRNNLSVFPERLTDVKSLKQISVEENQITELP 132
Query: 342 RGRLSAAPVL 371
+LS P L
Sbjct: 133 MQKLSLMPAL 142
>UniRef50_Q2MFW1 Cluster: KanG; n=3; Streptomyces kanamyceticus|Rep:
KanG - Streptomyces kanamyceticus
Length = 373
Score = 31.1 bits (67), Expect = 6.9
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -3
Query: 101 LQCYIHVHVVTRQDGVGGDLDFNISHGCDYLTV 3
L C +HV + R+ G D D ++SHG D + +
Sbjct: 302 LACLLHVALRARRTGAAKDFDASLSHGWDSVNI 334
>UniRef50_Q6H667 Cluster: Thylakoid lumenal protein-like; n=3;
Viridiplantae|Rep: Thylakoid lumenal protein-like -
Oryza sativa subsp. japonica (Rice)
Length = 277
Score = 31.1 bits (67), Expect = 6.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 108 APLAVLHSRPCCYPTRWGWWGPRLQHQP 25
+PLA +RPC +PT W P L+ P
Sbjct: 7 SPLAAAAARPCAFPTPWRCRSPPLRRLP 34
>UniRef50_Q21ZI9 Cluster: Phage Gp37Gp68; n=5; Bacteria|Rep: Phage
Gp37Gp68 - Rhodoferax ferrireducens (strain DSM 15236 /
ATCC BAA-621 / T118)
Length = 310
Score = 30.7 bits (66), Expect = 9.1
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 50 HQPHLVG*QHGRECSTARGAKDSFNPWWSC 139
HQ H+ G + + +T +FNPWW C
Sbjct: 14 HQLHIAGLANMGKETTIEWTHHTFNPWWGC 43
>UniRef50_A7HWJ2 Cluster: Putative uncharacterized protein; n=1;
Parvibaculum lavamentivorans DS-1|Rep: Putative
uncharacterized protein - Parvibaculum lavamentivorans
DS-1
Length = 104
Score = 30.7 bits (66), Expect = 9.1
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +1
Query: 157 PLKLLTRGK-QYYVFWLRTVVKPHTRNLFRLCATTSDSTXXXXXXXKAWRMGW 312
PL L+ RG ++Y +++ ++ P R+L T SD T AWR GW
Sbjct: 5 PLSLIMRGLIRFYQWFISPLIGPKCRHL----PTCSDYTMQAIERHGAWRGGW 53
>UniRef50_A3V268 Cluster: Flagellar proximal rod protein FlgB; n=2;
Proteobacteria|Rep: Flagellar proximal rod protein FlgB
- Loktanella vestfoldensis SKA53
Length = 105
Score = 30.7 bits (66), Expect = 9.1
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 3 DSQIVTTMADVEVEVPTNPILSGNNMDVNVALQEVLKTAL 122
D+ T+ DV+ VP NP L GN ++++V E + +L
Sbjct: 43 DNLAGTSGVDVQYRVPLNPSLDGNTVELSVEQMEFSENSL 82
>UniRef50_Q4CL93 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 243
Score = 30.7 bits (66), Expect = 9.1
Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Frame = +3
Query: 156 AAKALDKRQAVLCVLAENCGEAAY---KKLVQALCN 254
+A L+ RQ V CVL E+ EAA +KLV +LC+
Sbjct: 59 SAYYLNVRQVVFCVLQEHASEAALLTREKLVSSLCD 94
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 388,595,317
Number of Sequences: 1657284
Number of extensions: 6982375
Number of successful extensions: 20923
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 20440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20917
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 14019197511
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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