Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10799X
(376 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1685.02c |rps1202|rps12-2|40S ribosomal protein S12|Schizosa... 80 1e-16
SPCC962.04 |rps1201|rps12-1, rps12|40S ribosomal protein S12|Sch... 79 2e-16
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 28 0.42
SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase Ub... 25 2.9
SPCC320.08 |||membrane transporter |Schizosaccharomyces pombe|ch... 25 3.9
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 25 5.1
SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3 |Sch... 25 5.1
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 25 5.1
SPBC725.06c |ppk31|mug25|serine/threonine protein kinase Ppk31 |... 25 5.1
SPACUNK4.15 |||2',3'-cyclic-nucleotide 3'-phosphodiesterase |Sch... 24 6.8
SPCC63.04 |mok14||alpha-1,3-glucan synthase Mok14|Schizosaccharo... 24 9.0
SPAC25H1.06 |||histone acetyltransferase complex subunit |Schizo... 24 9.0
SPCC576.17c |||membrane transporter|Schizosaccharomyces pombe|ch... 24 9.0
SPBC14C8.13 |||SRR1 family protein|Schizosaccharomyces pombe|chr... 24 9.0
SPBC13G1.15c |||dubious|Schizosaccharomyces pombe|chr 2|||Manual 24 9.0
SPAC24H6.01c ||SPAPB21F2.01|membrane bound O-acyltransferase, MB... 24 9.0
>SPBC1685.02c |rps1202|rps12-2|40S ribosomal protein
S12|Schizosaccharomyces pombe|chr 2|||Manual
Length = 148
Score = 79.8 bits (188), Expect = 1e-16
Identities = 40/81 (49%), Positives = 56/81 (69%)
Frame = +3
Query: 9 QIVTTMADVEVEVPTNPILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAV 188
+++ T+ VE E ++P+ V +L+EVLK AL+H GL G+ EA+KALD+RQA
Sbjct: 13 EVIETVEVVEEETGSSPL------SVEDSLKEVLKRALVHDGLARGIREASKALDRRQAH 66
Query: 189 LCVLAENCGEAAYKKLVQALC 251
LCVL E+C + AY KLV+ALC
Sbjct: 67 LCVLCESCDQEAYVKLVEALC 87
Score = 65.7 bits (153), Expect = 2e-12
Identities = 27/41 (65%), Positives = 33/41 (80%)
Frame = +2
Query: 254 QHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVGI 376
+ Q PLVKV + K LGEWAGLC +D+DG ARK+VGCSCV +
Sbjct: 89 ESQTPLVKVADPKILGEWAGLCVLDRDGNARKVVGCSCVAV 129
>SPCC962.04 |rps1201|rps12-1, rps12|40S ribosomal protein
S12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 145
Score = 79.0 bits (186), Expect = 2e-16
Identities = 42/79 (53%), Positives = 53/79 (67%)
Frame = +3
Query: 15 VTTMADVEVEVPTNPILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLC 194
V + +VEVE +S V AL+EVLK AL+H GL G+ EA+KALD+RQA LC
Sbjct: 11 VDVVEEVEVEAAAPETVS-----VEDALKEVLKRALVHDGLARGIREASKALDRRQAHLC 65
Query: 195 VLAENCGEAAYKKLVQALC 251
VL E+C + AY KLV+ALC
Sbjct: 66 VLCESCDQEAYVKLVEALC 84
Score = 64.5 bits (150), Expect = 5e-12
Identities = 25/41 (60%), Positives = 33/41 (80%)
Frame = +2
Query: 254 QHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVGI 376
+ + PL+KV + K LGEWAGLC +D+DG ARK+VGCSCV +
Sbjct: 86 ESETPLIKVADPKVLGEWAGLCVLDRDGNARKVVGCSCVAV 126
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 28.3 bits (60), Expect = 0.42
Identities = 19/75 (25%), Positives = 29/75 (38%)
Frame = -1
Query: 238 TSFLYAASPQFSAKTHSTACXXXXXXXXXXRPCTRPPWIKAVFSTSCSATFTSMLLPDKM 59
TS Y ++P S +T C P T P +TS S +TS +
Sbjct: 454 TSVPYTSTPVTSTPLTTTNCTTSTSIPYTSTPVTSTPLTTTNCTTSTSVPYTSTPVTSSN 513
Query: 58 GLVGTSTSTSAMVVT 14
+ +ST ++ VT
Sbjct: 514 YTISSSTPVTSTPVT 528
Score = 24.6 bits (51), Expect = 5.1
Identities = 19/71 (26%), Positives = 27/71 (38%), Gaps = 1/71 (1%)
Frame = -1
Query: 238 TSFLYAASPQFSAKTHSTACXXXXXXXXXXRPCTRPPWIKAVFSTSCSATFTSM-LLPDK 62
TS Y ++P S +T C P T P +TS S +TS +
Sbjct: 431 TSVPYTSTPVTSTPLATTNCTTSTSVPYTSTPVTSTPLTTTNCTTSTSIPYTSTPVTSTP 490
Query: 61 MGLVGTSTSTS 29
+ +TSTS
Sbjct: 491 LTTTNCTTSTS 501
Score = 24.2 bits (50), Expect = 6.8
Identities = 16/70 (22%), Positives = 27/70 (38%)
Frame = -1
Query: 223 AASPQFSAKTHSTACXXXXXXXXXXRPCTRPPWIKAVFSTSCSATFTSMLLPDKMGLVGT 44
+++P S +T C P T P +TS S +TS + + +
Sbjct: 518 SSTPVTSTPVTTTNCTTSTSVLYTSTPVTSTPLATTNCTTSTSVPYTSTPVTSSNYTISS 577
Query: 43 STSTSAMVVT 14
ST ++ VT
Sbjct: 578 STPVTSTPVT 587
>SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase
Ubp21|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1129
Score = 25.4 bits (53), Expect = 2.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 39 VEVPTNPILSGNNMDVNVALQEVLKTALIHGGLVHGLH 152
+E+ P LS D + + VL L+HGG +HG H
Sbjct: 445 LEIDLEPYLS-ETADKSESHVYVLHGVLVHGGDLHGGH 481
>SPCC320.08 |||membrane transporter |Schizosaccharomyces pombe|chr
3|||Manual
Length = 505
Score = 25.0 bits (52), Expect = 3.9
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 258 IRFHWSRLTTTKSLENGLVSARLTRMARRGRLSA 359
+R+HWS++ + GLV ++ + RG SA
Sbjct: 258 VRYHWSQILGVVACIGGLVLLVVSDVISRGDYSA 291
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 24.6 bits (51), Expect = 5.1
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = -2
Query: 228 CMRLHHSSQPKHIVLLASCQEL*RLREDRAQDHHGLKLSLAPLAVLHSRPCCYPT 64
C+ S +HIV A L +D +DH G+ L ++P V + P+
Sbjct: 517 CVLCTTSESGEHIVAGAGELHLEICLKDLQEDHAGIPLKISPPVVSYRESVSEPS 571
>SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1133
Score = 24.6 bits (51), Expect = 5.1
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -2
Query: 135 DHHGLKLSLAPLAVLHSRPC 76
D GL ++ L+++HSRPC
Sbjct: 529 DEMGLGKTIEVLSLIHSRPC 548
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 24.6 bits (51), Expect = 5.1
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = -2
Query: 228 CMRLHHSSQPKHIVLLASCQEL*RLREDRAQDHHGLKLSLAPLAVLHSRPCCYPT 64
C+ S +HIV A L +D +DH G+ L ++P V + P+
Sbjct: 517 CVLCTTSESGEHIVAGAGELHLEICLKDLQEDHAGIPLKISPPVVSYRESVSEPS 571
>SPBC725.06c |ppk31|mug25|serine/threonine protein kinase Ppk31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1032
Score = 24.6 bits (51), Expect = 5.1
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 212 W*SRIQETCSGSVQQHQIPLVKVDNNKKLG 301
W R++E+CS L+ D NK+LG
Sbjct: 835 WTKRVKESCSKEAVDLITKLMDPDCNKRLG 864
>SPACUNK4.15 |||2',3'-cyclic-nucleotide 3'-phosphodiesterase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 208
Score = 24.2 bits (50), Expect = 6.8
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -3
Query: 221 GFTTVLSQNT*YCLPLVKSFSGFVKTVHKTTMD 123
GF V S++ YC+ LV + S ++ ++T +D
Sbjct: 18 GFAEVSSEDHCYCVWLVPAISSDIELRYRTFVD 50
>SPCC63.04 |mok14||alpha-1,3-glucan synthase
Mok14|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1369
Score = 23.8 bits (49), Expect = 9.0
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 272 VKVDNNKKLGEWAGLCKIDKDGKARKIVG 358
V+ +N +K EWAGL ID + VG
Sbjct: 527 VRKENKRKAQEWAGL-TIDDEADLLVFVG 554
>SPAC25H1.06 |||histone acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 408
Score = 23.8 bits (49), Expect = 9.0
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 121 KAVFSTSCSATFTSMLLPDKMGLVGTSTSTS 29
K+VF+TS + + +P ++ L GTS S S
Sbjct: 309 KSVFNTSEDLSDNRLKVPSRLTLGGTSLSWS 339
>SPCC576.17c |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 525
Score = 23.8 bits (49), Expect = 9.0
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = -2
Query: 102 LAVLHSRPCCYPTRWGWW 49
LA + + +P WGWW
Sbjct: 61 LAGISNEHPAHPQNWGWW 78
>SPBC14C8.13 |||SRR1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 251
Score = 23.8 bits (49), Expect = 9.0
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 49 PPTPSCRVTTWT*M*HC 99
PPTPSC T M HC
Sbjct: 133 PPTPSCLKYTLLYMPHC 149
>SPBC13G1.15c |||dubious|Schizosaccharomyces pombe|chr 2|||Manual
Length = 111
Score = 23.8 bits (49), Expect = 9.0
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 197 NT*YCLPLVKSFSGFVKTVHKT 132
N YCLP +F FVK + +T
Sbjct: 90 NRLYCLPFCNAFIEFVKKLTET 111
>SPAC24H6.01c ||SPAPB21F2.01|membrane bound O-acyltransferase, MBOAT
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 588
Score = 23.8 bits (49), Expect = 9.0
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = -2
Query: 234 VSCMRLHHSSQPKH 193
++C ++H+ S PKH
Sbjct: 72 IACFKIHYVSSPKH 85
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,561,873
Number of Sequences: 5004
Number of extensions: 28232
Number of successful extensions: 106
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 106
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 120195862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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