Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10799X
(376 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0360 + 2646279-2646283,2647113-2647398,2648043-2648108,264... 82 1e-16
07_01_0875 - 7265529-7265588,7265681-7265746,7266008-7266293,726... 82 2e-16
02_05_0105 + 25874155-25874495,25874586-25874615,25875327-258754... 31 0.29
08_02_0101 + 12374476-12376683 30 0.68
11_01_0570 - 4529901-4529962,4530725-4530800,4531247-4531306,453... 29 0.90
10_08_0046 + 14411844-14413154,14413753-14413800,14413879-144139... 28 2.7
02_05_1017 - 33521135-33522604,33522727-33522976,33523078-33524255 28 2.7
01_05_0740 - 24809951-24810394,24810622-24810700,24811651-248118... 28 2.7
08_02_1034 + 23823194-23823307,23823399-23823620,23823984-238243... 27 3.6
07_03_1037 - 23438205-23441219,23443509-23444513,23444627-23446708 27 3.6
11_06_0013 - 19252779-19252805,19252947-19253090,19253572-192536... 27 4.8
11_01_0681 - 5568312-5568328,5569057-5569213,5569321-5569482,556... 27 4.8
09_02_0084 + 4106803-4106851,4108165-4108460 27 4.8
11_03_0180 - 11294527-11294823,11295847-11295852 27 6.3
06_03_0493 + 21402536-21404599 27 6.3
05_07_0269 - 28837918-28838075,28840443-28840551,28840774-28841910 26 8.4
04_04_0152 - 23137101-23137112,23138084-23138488 26 8.4
01_05_0142 - 18564697-18564792,18564824-18564928,18565606-185656... 26 8.4
>07_01_0360 +
2646279-2646283,2647113-2647398,2648043-2648108,
2648199-2648258
Length = 138
Score = 82.2 bits (194), Expect = 1e-16
Identities = 43/90 (47%), Positives = 56/90 (62%)
Frame = +3
Query: 30 DVEVEVPTNPILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAEN 209
+ VE P P+L G MD+ ALQ V+K + H GLV GL EAAKA++K A LCVLAE+
Sbjct: 4 ETPVETPAAPVL-GEPMDLMTALQLVMKKSSAHDGLVKGLREAAKAIEKHAAQLCVLAED 62
Query: 210 CGEAAYKKLVQALCNNIRFHWSRLTTTKSL 299
C + Y KLV+ALC H + + K+L
Sbjct: 63 CDQPDYVKLVKALCAEHNVHLVTVPSAKTL 92
Score = 66.1 bits (154), Expect = 8e-12
Identities = 27/39 (69%), Positives = 32/39 (82%)
Frame = +2
Query: 254 QHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCV 370
+H + LV V + K LGEWAGLCKID +GKARK+VGCSCV
Sbjct: 78 EHNVHLVTVPSAKTLGEWAGLCKIDSEGKARKVVGCSCV 116
>07_01_0875 -
7265529-7265588,7265681-7265746,7266008-7266293,
7267138-7267142
Length = 138
Score = 81.8 bits (193), Expect = 2e-16
Identities = 43/90 (47%), Positives = 56/90 (62%)
Frame = +3
Query: 30 DVEVEVPTNPILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAEN 209
+ VE P P+L G MD+ ALQ V+K + H GLV GL EAAKA++K A LCVLAE+
Sbjct: 4 ETPVEAPPAPVL-GEPMDLMTALQLVMKKSSAHDGLVKGLREAAKAIEKHAAQLCVLAED 62
Query: 210 CGEAAYKKLVQALCNNIRFHWSRLTTTKSL 299
C + Y KLV+ALC H + + K+L
Sbjct: 63 CDQPDYVKLVKALCAEHNVHLVTVPSAKTL 92
Score = 66.1 bits (154), Expect = 8e-12
Identities = 27/39 (69%), Positives = 32/39 (82%)
Frame = +2
Query: 254 QHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCV 370
+H + LV V + K LGEWAGLCKID +GKARK+VGCSCV
Sbjct: 78 EHNVHLVTVPSAKTLGEWAGLCKIDSEGKARKVVGCSCV 116
>02_05_0105 +
25874155-25874495,25874586-25874615,25875327-25875433,
25875884-25875918,25876310-25876438,25877103-25877294
Length = 277
Score = 31.1 bits (67), Expect = 0.29
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 108 APLAVLHSRPCCYPTRWGWWGPRLQHQP 25
+PLA +RPC +PT W P L+ P
Sbjct: 7 SPLAAAAARPCAFPTPWRCRSPPLRRLP 34
>08_02_0101 + 12374476-12376683
Length = 735
Score = 29.9 bits (64), Expect = 0.68
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = +3
Query: 84 VNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCG--EAAYKKLVQALCNN 257
V + L+ L+TA + L+HGL A + + + A++C Y +V LC
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEA 190
Query: 258 IRFHWSRLTTTKSLENG 308
R + + +++ NG
Sbjct: 191 GRTEEAEVLLEEAMSNG 207
>11_01_0570 -
4529901-4529962,4530725-4530800,4531247-4531306,
4533797-4533959,4534037-4534091,4534314-4534366,
4534881-4534980,4535556-4535703,4535964-4536056
Length = 269
Score = 29.5 bits (63), Expect = 0.90
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = -3
Query: 101 LQCYIHVHVVTRQDGVGGDLDF 36
++CY H H++T+ +G GGD +
Sbjct: 213 IECYEHNHLITKVEGDGGDSSY 234
>10_08_0046 +
14411844-14413154,14413753-14413800,14413879-14413992,
14414218-14414496,14414602-14414715,14415210-14415282,
14415973-14416073
Length = 679
Score = 27.9 bits (59), Expect = 2.7
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +3
Query: 105 VLKTALIHGGLVHG-LHEAAKALDKRQAVLCVLAENCGEAAYKKLVQALCN-NIRFHWSR 278
+++ +L+HG VHG EA + LD ++ L G ++ + LC+ N++F+ S
Sbjct: 209 IVQRSLLHGWCVHGNAKEARRVLDDIKSSCTPL----GLPSFNDYLHCLCHRNLKFNPSA 264
Query: 279 LTT 287
L T
Sbjct: 265 LVT 267
>02_05_1017 - 33521135-33522604,33522727-33522976,33523078-33524255
Length = 965
Score = 27.9 bits (59), Expect = 2.7
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Frame = +3
Query: 54 NPILSGNNMDVNVALQEVL----KTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCGEA 221
NP+L G+ +DV+ +QEV+ + L + ++ E +D +A L + GEA
Sbjct: 217 NPVLVGDTVDVDAVVQEVVTMIQRQRLGNARVISFQREFGDLVDLDRAELAAKIKELGEA 276
Query: 222 AYKKLV 239
+L+
Sbjct: 277 IRSELL 282
>01_05_0740 - 24809951-24810394,24810622-24810700,24811651-24811809,
24812083-24812246,24812436-24812624,24813151-24813408,
24813463-24813951,24814062-24814262,24814368-24814639,
24814661-24814685,24814776-24814937,24815065-24815104,
24815244-24815353,24815812-24815898,24816013-24816507
Length = 1057
Score = 27.9 bits (59), Expect = 2.7
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = +3
Query: 192 CVLAENCGEAAYKKLVQALCNNIRFHWSRLTTTKSLENGLVSARLTRMARRGRLS 356
C+L+ + + Y ++++ + N FH SR E G + + RRG++S
Sbjct: 904 CILSLHRDQHCYSRVLELIVNVWAFHSSRRMVYVDPETGAMQEQHLLNGRRGQMS 958
>08_02_1034 +
23823194-23823307,23823399-23823620,23823984-23824309,
23824648-23824777,23825145-23825441,23825550-23825815,
23827835-23828333,23828902-23828993,23829571-23829735,
23829817-23830204,23830275-23830393,23830494-23830524,
23830675-23830880,23830970-23831014,23831120-23831201,
23832210-23832398,23834499-23834602,23834669-23834759,
23835097-23835225,23835425-23835556,23835779-23835949,
23836143-23836171,23836214-23836301,23836313-23836391,
23836666-23836844
Length = 1390
Score = 27.5 bits (58), Expect = 3.6
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +3
Query: 81 DVNVALQEVLKTALIHGGLVHGLHEAAKALD 173
D+ V L + L++ I GLV +H+AA++++
Sbjct: 554 DIRVKLVKALQSEDISTGLVQSIHDAARSIE 584
>07_03_1037 - 23438205-23441219,23443509-23444513,23444627-23446708
Length = 2033
Score = 27.5 bits (58), Expect = 3.6
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +3
Query: 249 CNNIRFHWSRLTTTKSLENGL---VSARLTRMARRGRLSAAP 365
C N+ W ++T++ LE+G+ + R T ++ RG AP
Sbjct: 669 CRNVEAPWRIVSTSRDLEDGMDCSIELRTTPISYRGGRRDAP 710
>11_06_0013 -
19252779-19252805,19252947-19253090,19253572-19253663,
19253757-19253835,19253965-19254031,19254163-19254254,
19254986-19255102,19255254-19255365,19255479-19255594,
19255680-19255756,19255912-19255993,19256077-19256214,
19258806-19259009
Length = 448
Score = 27.1 bits (57), Expect = 4.8
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +3
Query: 120 LIHGGLVHGLHEAAKALDKRQAVLCVLAENCGEAAYKKLVQALC 251
++ GG HG+HE +D R+ L + + AY LV ALC
Sbjct: 139 ILQGGFFHGIHELTYGVDIRKIRLMGVLQRIA-IAY--LVVALC 179
>11_01_0681 -
5568312-5568328,5569057-5569213,5569321-5569482,
5569524-5570546
Length = 452
Score = 27.1 bits (57), Expect = 4.8
Identities = 19/79 (24%), Positives = 29/79 (36%)
Frame = +3
Query: 84 VNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCGEAAYKKLVQALCNNIR 263
VN Q + + G + G E + +LC A +C + L N
Sbjct: 287 VNYMNQSPVFEGIPSGSFITG-QEVGVVSSGTRCMLCTYAFSCTASTCAFLDHMFTFNFE 345
Query: 264 FHWSRLTTTKSLENGLVSA 320
+W R T L+ L+SA
Sbjct: 346 MYWQRCPTFSKLKTLLISA 364
>09_02_0084 + 4106803-4106851,4108165-4108460
Length = 114
Score = 27.1 bits (57), Expect = 4.8
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +3
Query: 81 DVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCGEAAYKKLVQAL 248
D+ A +L A+ GL +A + DK Q L +N EAA K QAL
Sbjct: 42 DIANAAAPILN-AIFQNGLGSSFDDAVELFDKLQCALDKYYKNIAEAATKWASQAL 96
>11_03_0180 - 11294527-11294823,11295847-11295852
Length = 100
Score = 26.6 bits (56), Expect = 6.3
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -2
Query: 225 MRLHHSSQPKHIVLLASCQEL*RLREDRAQ 136
+RLHH S I +LA C++ L+E+R +
Sbjct: 3 VRLHHWSDEDCIKILAQCKKAVPLQEERGK 32
>06_03_0493 + 21402536-21404599
Length = 687
Score = 26.6 bits (56), Expect = 6.3
Identities = 22/74 (29%), Positives = 33/74 (44%)
Frame = +3
Query: 90 VALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCGEAAYKKLVQALCNNIRFH 269
V E+L T LIHG ++ E A L + + + Y L+Q LCN +
Sbjct: 394 VRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDI---SLYGALIQGLCNVHKLD 450
Query: 270 WSRLTTTKSLENGL 311
++ TK E+GL
Sbjct: 451 EAKSLLTKMDESGL 464
>05_07_0269 - 28837918-28838075,28840443-28840551,28840774-28841910
Length = 467
Score = 26.2 bits (55), Expect = 8.4
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 84 VNVALQEVLKTALIHGGLVHGLHEAAKAL 170
+ +A EV TAL+HG HG E AL
Sbjct: 67 LGLAPNEVTYTALMHGYFTHGQREKGFAL 95
>04_04_0152 - 23137101-23137112,23138084-23138488
Length = 138
Score = 26.2 bits (55), Expect = 8.4
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 84 VNVALQEVLKTALIHGGLVHGLHEAAKAL 170
+ +A EV TAL+HG HG E AL
Sbjct: 67 LGLAPNEVTYTALMHGYFTHGQREKGFAL 95
>01_05_0142 -
18564697-18564792,18564824-18564928,18565606-18565678,
18566262-18567637
Length = 549
Score = 26.2 bits (55), Expect = 8.4
Identities = 11/44 (25%), Positives = 19/44 (43%)
Frame = +3
Query: 216 EAAYKKLVQALCNNIRFHWSRLTTTKSLENGLVSARLTRMARRG 347
E Y+ + + CN+I HW ++ + +V A L G
Sbjct: 450 EEHYQSRINSECNSIVTHWRKMINLLNFPTSVVKASLINAPPHG 493
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,935,368
Number of Sequences: 37544
Number of extensions: 206083
Number of successful extensions: 698
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 698
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 600754600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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