Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10799X
         (376 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_39846| Best HMM Match : SIR2 (HMM E-Value=1.4013e-45)              100   3e-22
SB_54602| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   6.5  
SB_6388| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   6.5  
SB_13922| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   8.7  

>SB_39846| Best HMM Match : SIR2 (HMM E-Value=1.4013e-45)
          Length = 427

 Score =  100 bits (240), Expect = 3e-22
 Identities = 48/76 (63%), Positives = 57/76 (75%)
 Frame = +3

Query: 24  MADVEVEVPTNPILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLA 203
           M+D E +  T    +G  MD+N ALQEVLKTALIH GL  GLHEAAK+LDKR+A LC+L+
Sbjct: 1   MSDAEGDDTTQQPAAGGAMDINTALQEVLKTALIHDGLSRGLHEAAKSLDKREAHLCILS 60

Query: 204 ENCGEAAYKKLVQALC 251
            NC EA Y KLV+ALC
Sbjct: 61  NNCDEAMYVKLVEALC 76



 Score = 79.0 bits (186), Expect = 1e-15
 Identities = 32/39 (82%), Positives = 38/39 (97%)
 Frame = +2

Query: 254 QHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCV 370
           +H IPL+KVD++KKLGEWAGLCKIDK+GKARK+VGCSCV
Sbjct: 78  EHGIPLLKVDDSKKLGEWAGLCKIDKEGKARKVVGCSCV 116


>SB_54602| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 450

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -2

Query: 234 VSCMRLHHSSQPKHIVLLASCQEL*RLREDRAQDHHGLK 118
           VSC +LH S+  KH   LA   E   L E+  +    LK
Sbjct: 358 VSCQKLHWSTHKKHCQRLAKEYEQELLMEEEIKRQEELK 396


>SB_6388| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1520

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 15/52 (28%), Positives = 26/52 (50%)
 Frame = +2

Query: 191  MCFG*ELW*SRIQETCSGSVQQHQIPLVKVDNNKKLGEWAGLCKIDKDGKAR 346
            +CF  EL  + +    S ++Q   IP+V  +      +W+ LC  D+D + R
Sbjct: 1326 LCFRYELAPTVVMVQTSCNLQPRPIPVVDPEEGSVQEDWSWLC-ADEDPRGR 1376


>SB_13922| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1012

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = -3

Query: 107  HLLQCYIHVHVVTRQDGVGGDLDFNISHGCDYLT 6
            H L+ ++ V  VT+Q+GV  D+ F +     Y++
Sbjct: 935  HNLKLWLKVDGVTKQEGVTSDMMFTVPFLISYIS 968


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,440,776
Number of Sequences: 59808
Number of extensions: 237545
Number of successful extensions: 605
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 605
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 619783250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)