Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10799X
(376 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC095424-1|AAH95424.1| 132|Homo sapiens ribosomal protein S12 p... 97 2e-20
BC071930-1|AAH71930.1| 132|Homo sapiens ribosomal protein S12 p... 97 2e-20
BC017321-1|AAH17321.1| 132|Homo sapiens ribosomal protein S12 p... 97 2e-20
AL137783-3|CAC12946.1| 132|Homo sapiens ribosomal protein S12 p... 97 2e-20
AB061840-1|BAB79478.1| 132|Homo sapiens ribosomal protein S12 p... 97 2e-20
X53505-1|CAA37582.1| 132|Homo sapiens ribosomal protein S12 pro... 91 1e-18
M60974-1|AAA35863.1| 165|Homo sapiens growth arrest and DNA-dam... 32 0.53
L24498-1|AAA72045.1| 165|Homo sapiens gadd45 protein. 32 0.53
BC011757-1|AAH11757.1| 165|Homo sapiens growth arrest and DNA-d... 32 0.53
AY135686-1|AAM88884.1| 165|Homo sapiens growth arrest and DNA-d... 32 0.53
AL136120-2|CAI23494.1| 165|Homo sapiens growth arrest and DNA-d... 32 0.53
BC041085-1|AAH41085.1| 865|Homo sapiens leucine-rich repeats an... 29 6.5
>BC095424-1|AAH95424.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 97.1 bits (231), Expect = 2e-20
Identities = 49/80 (61%), Positives = 56/80 (70%)
Frame = +3
Query: 60 ILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCGEAAYKKLV 239
I +G MDVN ALQEVLKTALIH GL G+ EAAKALDKRQA LCVLA NC E Y KLV
Sbjct: 6 IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLV 65
Query: 240 QALCNNIRFHWSRLTTTKSL 299
+ALC + + ++ K L
Sbjct: 66 EALCAEHQINLIKVDDNKKL 85
Score = 76.2 bits (179), Expect = 3e-14
Identities = 30/39 (76%), Positives = 36/39 (92%)
Frame = +2
Query: 254 QHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCV 370
+HQI L+KVD+NKKLGEW GLCKID++GK RK+VGCSCV
Sbjct: 71 EHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCV 109
>BC071930-1|AAH71930.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 97.1 bits (231), Expect = 2e-20
Identities = 49/80 (61%), Positives = 56/80 (70%)
Frame = +3
Query: 60 ILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCGEAAYKKLV 239
I +G MDVN ALQEVLKTALIH GL G+ EAAKALDKRQA LCVLA NC E Y KLV
Sbjct: 6 IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLV 65
Query: 240 QALCNNIRFHWSRLTTTKSL 299
+ALC + + ++ K L
Sbjct: 66 EALCAEHQINLIKVDDNKKL 85
Score = 76.2 bits (179), Expect = 3e-14
Identities = 30/39 (76%), Positives = 36/39 (92%)
Frame = +2
Query: 254 QHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCV 370
+HQI L+KVD+NKKLGEW GLCKID++GK RK+VGCSCV
Sbjct: 71 EHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCV 109
>BC017321-1|AAH17321.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 97.1 bits (231), Expect = 2e-20
Identities = 49/80 (61%), Positives = 56/80 (70%)
Frame = +3
Query: 60 ILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCGEAAYKKLV 239
I +G MDVN ALQEVLKTALIH GL G+ EAAKALDKRQA LCVLA NC E Y KLV
Sbjct: 6 IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLV 65
Query: 240 QALCNNIRFHWSRLTTTKSL 299
+ALC + + ++ K L
Sbjct: 66 EALCAEHQINLIKVDDNKKL 85
Score = 76.2 bits (179), Expect = 3e-14
Identities = 30/39 (76%), Positives = 36/39 (92%)
Frame = +2
Query: 254 QHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCV 370
+HQI L+KVD+NKKLGEW GLCKID++GK RK+VGCSCV
Sbjct: 71 EHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCV 109
>AL137783-3|CAC12946.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 97.1 bits (231), Expect = 2e-20
Identities = 49/80 (61%), Positives = 56/80 (70%)
Frame = +3
Query: 60 ILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCGEAAYKKLV 239
I +G MDVN ALQEVLKTALIH GL G+ EAAKALDKRQA LCVLA NC E Y KLV
Sbjct: 6 IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLV 65
Query: 240 QALCNNIRFHWSRLTTTKSL 299
+ALC + + ++ K L
Sbjct: 66 EALCAEHQINLIKVDDNKKL 85
Score = 76.2 bits (179), Expect = 3e-14
Identities = 30/39 (76%), Positives = 36/39 (92%)
Frame = +2
Query: 254 QHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCV 370
+HQI L+KVD+NKKLGEW GLCKID++GK RK+VGCSCV
Sbjct: 71 EHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCV 109
>AB061840-1|BAB79478.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 97.1 bits (231), Expect = 2e-20
Identities = 49/80 (61%), Positives = 56/80 (70%)
Frame = +3
Query: 60 ILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCGEAAYKKLV 239
I +G MDVN ALQEVLKTALIH GL G+ EAAKALDKRQA LCVLA NC E Y KLV
Sbjct: 6 IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLV 65
Query: 240 QALCNNIRFHWSRLTTTKSL 299
+ALC + + ++ K L
Sbjct: 66 EALCAEHQINLIKVDDNKKL 85
Score = 76.2 bits (179), Expect = 3e-14
Identities = 30/39 (76%), Positives = 36/39 (92%)
Frame = +2
Query: 254 QHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCV 370
+HQI L+KVD+NKKLGEW GLCKID++GK RK+VGCSCV
Sbjct: 71 EHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCV 109
>X53505-1|CAA37582.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 90.6 bits (215), Expect = 1e-18
Identities = 47/80 (58%), Positives = 54/80 (67%)
Frame = +3
Query: 60 ILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCGEAAYKKLV 239
I +G MDVN ALQEVLKTALIH GL G+ EAAKALDKRQA LCV A NC E Y KLV
Sbjct: 6 IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVQASNCDEPMYVKLV 65
Query: 240 QALCNNIRFHWSRLTTTKSL 299
+AL + + ++ K L
Sbjct: 66 EALLAEHQINLIKVDDNKKL 85
Score = 74.1 bits (174), Expect = 1e-13
Identities = 29/39 (74%), Positives = 35/39 (89%)
Frame = +2
Query: 254 QHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCV 370
+HQI L+KVD+NKKLGEW GLCKID++G RK+VGCSCV
Sbjct: 71 EHQINLIKVDDNKKLGEWVGLCKIDREGNPRKVVGCSCV 109
>M60974-1|AAA35863.1| 165|Homo sapiens growth arrest and
DNA-damage-inducible protein protein.
Length = 165
Score = 32.3 bits (70), Expect = 0.53
Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +3
Query: 84 VNVALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLA 203
V AL+EVL AL + G++EAAK L D VLC+LA
Sbjct: 19 VGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLA 60
>L24498-1|AAA72045.1| 165|Homo sapiens gadd45 protein.
Length = 165
Score = 32.3 bits (70), Expect = 0.53
Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +3
Query: 84 VNVALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLA 203
V AL+EVL AL + G++EAAK L D VLC+LA
Sbjct: 19 VGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLA 60
>BC011757-1|AAH11757.1| 165|Homo sapiens growth arrest and
DNA-damage-inducible, alpha protein.
Length = 165
Score = 32.3 bits (70), Expect = 0.53
Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +3
Query: 84 VNVALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLA 203
V AL+EVL AL + G++EAAK L D VLC+LA
Sbjct: 19 VGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLA 60
>AY135686-1|AAM88884.1| 165|Homo sapiens growth arrest and
DNA-damage-inducible, alpha protein.
Length = 165
Score = 32.3 bits (70), Expect = 0.53
Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +3
Query: 84 VNVALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLA 203
V AL+EVL AL + G++EAAK L D VLC+LA
Sbjct: 19 VGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLA 60
>AL136120-2|CAI23494.1| 165|Homo sapiens growth arrest and
DNA-damage-inducible, alpha protein.
Length = 165
Score = 32.3 bits (70), Expect = 0.53
Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +3
Query: 84 VNVALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLA 203
V AL+EVL AL + G++EAAK L D VLC+LA
Sbjct: 19 VGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLA 60
>BC041085-1|AAH41085.1| 865|Homo sapiens leucine-rich repeats and
IQ motif containing 2 protein.
Length = 865
Score = 28.7 bits (61), Expect = 6.5
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +3
Query: 63 LSGNNMDVNVALQEV--LKTALIHGGLVHGLHEAAKALDKRQAVLCVLAEN 209
LS NN+ L ++ LKT L+HG ++ L A L + A+L LAEN
Sbjct: 131 LSDNNISQIGDLSKLVSLKTLLLHGNIITSLRMAPAYLPRSLAILS-LAEN 180
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,143,179
Number of Sequences: 237096
Number of extensions: 1141357
Number of successful extensions: 2541
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2541
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2479134298
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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