Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10798
         (335 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    24   0.37 
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    23   1.1  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   1.5  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   2.6  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    20   6.0  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    20   8.0  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    20   8.0  

>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
          protein.
          Length = 377

 Score = 24.2 bits (50), Expect = 0.37
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 95 TSSIFCVMDSWWERRPGN 42
          T  + C   SW  +RPGN
Sbjct: 22 TDKVICYYASWGAQRPGN 39


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
          protein.
          Length = 377

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = -1

Query: 95 TSSIFCVMDSWWERRPGN 42
          +  I C   SW   RPGN
Sbjct: 20 SDKIICYYASWGANRPGN 37


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.2 bits (45), Expect = 1.5
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -1

Query: 86  IFCVMDSWWERRPG 45
           + C + SW ++RPG
Sbjct: 524 VLCYITSWSQKRPG 537


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +3

Query: 123 EGVVSFCSSWPCGHDS**ACSECASFHQLPC 215
           E  V+FC++ PC +     C+   + H+  C
Sbjct: 336 ESKVNFCATSPCQNGG--VCTTIHAGHKCTC 364


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -2

Query: 85  SSASWTPGGRED 50
           SS  W+P G E+
Sbjct: 83  SSVGWSPAGHEE 94


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +3

Query: 213 CVTAQETLAECP 248
           CV  Q+ L +CP
Sbjct: 48  CVNGQQELYDCP 59


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +1

Query: 172 DELAQNVHLSINFLVSLLKK 231
           DE+ +N  L+ N+L  +L+K
Sbjct: 30  DEILKNDRLTKNYLDCILEK 49


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,925
Number of Sequences: 336
Number of extensions: 1931
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6579502
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)