Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10798
(335 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 24 0.57
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 24 0.57
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 2.3
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 2.3
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 2.3
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 2.3
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 2.3
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 2.3
AF393495-1|AAL60420.1| 136|Apis mellifera odorant binding prote... 21 3.0
AF393492-1|AAL60417.1| 136|Apis mellifera odorant binding prote... 21 3.0
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 4.0
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 21 5.3
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 21 5.3
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 20 7.0
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 20 7.0
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 20 7.0
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 20 9.2
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 20 9.2
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 23.8 bits (49), Expect = 0.57
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 25 LNKAGKFPGLLSHQE 69
LNK GK P L++H+E
Sbjct: 573 LNKIGKNPNLVAHRE 587
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 23.8 bits (49), Expect = 0.57
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 25 LNKAGKFPGLLSHQE 69
LNK GK P L++H+E
Sbjct: 541 LNKIGKNPNLVAHRE 555
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 2.3
Identities = 10/26 (38%), Positives = 11/26 (42%)
Frame = +2
Query: 197 FPSTSLCHCSRNTGRMSDHSYEINDG 274
F TS CH R D + NDG
Sbjct: 224 FQRTSSCHSRYEDSRHEDRNSYRNDG 249
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 2.3
Identities = 10/26 (38%), Positives = 11/26 (42%)
Frame = +2
Query: 197 FPSTSLCHCSRNTGRMSDHSYEINDG 274
F TS CH R D + NDG
Sbjct: 224 FQRTSSCHSRYEDSRHEDRNSYRNDG 249
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 2.3
Identities = 10/26 (38%), Positives = 11/26 (42%)
Frame = +2
Query: 197 FPSTSLCHCSRNTGRMSDHSYEINDG 274
F TS CH R D + NDG
Sbjct: 224 FQRTSSCHSRYEDSRHEDRNSYRNDG 249
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 2.3
Identities = 10/26 (38%), Positives = 11/26 (42%)
Frame = +2
Query: 197 FPSTSLCHCSRNTGRMSDHSYEINDG 274
F TS CH R D + NDG
Sbjct: 224 FQRTSSCHSRYEDSRHEDRNSYRNDG 249
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.8 bits (44), Expect = 2.3
Identities = 10/26 (38%), Positives = 11/26 (42%)
Frame = +2
Query: 197 FPSTSLCHCSRNTGRMSDHSYEINDG 274
F TS CH R D + NDG
Sbjct: 224 FQRTSSCHSRYEDSRHEDRNSYRNDG 249
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.8 bits (44), Expect = 2.3
Identities = 10/26 (38%), Positives = 11/26 (42%)
Frame = +2
Query: 197 FPSTSLCHCSRNTGRMSDHSYEINDG 274
F TS CH R D + NDG
Sbjct: 224 FQRTSSCHSRYEDSRHEDRNSYRNDG 249
>AF393495-1|AAL60420.1| 136|Apis mellifera odorant binding protein
ASP4 protein.
Length = 136
Score = 21.4 bits (43), Expect = 3.0
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +1
Query: 151 GHVDMTPDELAQNVHLSINFLVS 219
G ++TPD+ ++VH I VS
Sbjct: 79 GTRELTPDDFTEDVHEIIEQCVS 101
>AF393492-1|AAL60417.1| 136|Apis mellifera odorant binding protein
ASP4 protein.
Length = 136
Score = 21.4 bits (43), Expect = 3.0
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +1
Query: 151 GHVDMTPDELAQNVHLSINFLVS 219
G ++TPD+ ++VH I VS
Sbjct: 79 GTRELTPDDFTEDVHEIIEQCVS 101
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 4.0
Identities = 10/26 (38%), Positives = 11/26 (42%)
Frame = +2
Query: 197 FPSTSLCHCSRNTGRMSDHSYEINDG 274
F TS CH R D + NDG
Sbjct: 224 FQRTSSCHSRYEDSRHEDGNSYRNDG 249
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 20.6 bits (41), Expect = 5.3
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +3
Query: 9 FVGSRFEQSW*IPWSSLPP 65
+ G+RF + IP LPP
Sbjct: 432 YYGNRFSGEYEIPAHGLPP 450
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 20.6 bits (41), Expect = 5.3
Identities = 5/18 (27%), Positives = 10/18 (55%)
Frame = +1
Query: 205 NFLVSLLKKHWQNVRSFI 258
N+L + ++W R F+
Sbjct: 338 NYLTKFVSEYWMETRGFL 355
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 20.2 bits (40), Expect = 7.0
Identities = 8/30 (26%), Positives = 14/30 (46%)
Frame = -1
Query: 140 ERHNTFFIWNLMVPLTSSIFCVMDSWWERR 51
+RH +F+ + VP + S+W R
Sbjct: 241 QRHTGYFLIQVYVPCVLIVVLSWVSFWIHR 270
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 7.0
Identities = 10/26 (38%), Positives = 11/26 (42%)
Frame = +2
Query: 197 FPSTSLCHCSRNTGRMSDHSYEINDG 274
F TS CH R D + NDG
Sbjct: 224 FQRTSSCHSRYEDLRHEDRNSYRNDG 249
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 20.2 bits (40), Expect = 7.0
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 13 LGPGLNKAGKF 45
L PG NK GKF
Sbjct: 238 LEPGTNKNGKF 248
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 19.8 bits (39), Expect = 9.2
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = -3
Query: 96 DFINLLRHGLL 64
+F+ LL+HG+L
Sbjct: 79 EFMQLLKHGML 89
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 19.8 bits (39), Expect = 9.2
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = -3
Query: 96 DFINLLRHGLL 64
+F+ LL+HG+L
Sbjct: 79 EFMQLLKHGML 89
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,520
Number of Sequences: 438
Number of extensions: 2163
Number of successful extensions: 18
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 7591023
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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