Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10793
(413 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC3D6.15 |rps2501|rps25-1|40S ribosomal protein S25|Schizosacc... 46 3e-06
SPAC694.05c |rps2502|rps25-2, rps25|40S ribosomal protein S25|Sc... 46 3e-06
SPAPB1E7.08c |||membrane transporter|Schizosaccharomyces pombe|c... 28 0.50
SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomy... 28 0.66
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 27 0.87
SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein Ph... 27 1.2
SPAC821.05 |||translation initiation factor eIF3h|Schizosaccharo... 27 1.2
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 25 3.5
SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyc... 25 4.7
SPAC2G11.13 |atg22||autophagy associated protein Atg22 |Schizosa... 25 4.7
SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated protei... 25 6.1
SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual 24 8.1
SPCC1753.04 |tol1||3'|Schizosaccharomyces pombe|chr 3|||Manual 24 8.1
SPAC25A8.01c ||snf2SR|fun thirty related protein Fft3|Schizosacc... 24 8.1
>SPBC3D6.15 |rps2501|rps25-1|40S ribosomal protein
S25|Schizosaccharomyces pombe|chr 2|||Manual
Length = 88
Score = 45.6 bits (103), Expect = 3e-06
Identities = 19/46 (41%), Positives = 33/46 (71%)
Frame = +3
Query: 135 LFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALSSLGKK 272
+FDK +++ KEVP +K I+ +V+ +R+K+ GSLAR A+ L ++
Sbjct: 21 VFDKSIIDRINKEVPAFKFISVSVLVDRMKINGSLARIAIRDLAER 66
Score = 30.7 bits (66), Expect = 0.094
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +2
Query: 257 ELREKGLIKQVVQHHGQVIYTRA 325
+L E+G+I++V QH Q IYTRA
Sbjct: 62 DLAERGVIQKVDQHSKQAIYTRA 84
>SPAC694.05c |rps2502|rps25-2, rps25|40S ribosomal protein
S25|Schizosaccharomyces pombe|chr 1|||Manual
Length = 89
Score = 45.6 bits (103), Expect = 3e-06
Identities = 19/46 (41%), Positives = 33/46 (71%)
Frame = +3
Query: 135 LFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALSSLGKK 272
+FDK +++ KEVP +K I+ +V+ +R+K+ GSLAR A+ L ++
Sbjct: 21 VFDKSIIDRINKEVPAFKFISVSVLVDRMKINGSLARIAIRDLAER 66
Score = 29.1 bits (62), Expect = 0.29
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +2
Query: 257 ELREKGLIKQVVQHHGQVIYTR 322
+L E+G+I++V QH Q IYTR
Sbjct: 62 DLAERGVIQKVDQHSKQAIYTR 83
>SPAPB1E7.08c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 554
Score = 28.3 bits (60), Expect = 0.50
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -2
Query: 223 FNLSDTTAGVISLYCGTSLYSFSYVGLSNNTWLFNLSRTFPLDHFFFL-ALP 71
FNL+ GV ++ G S +F+ + + + W F + P+D FL ALP
Sbjct: 151 FNLTFLFTGVFAVIAGASP-NFASICVFDALWSFGVGGNLPVDSAIFLEALP 201
>SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 613
Score = 27.9 bits (59), Expect = 0.66
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Frame = -2
Query: 286 LFDETFFPKLESALLAREPRTFN--LSDTTAGVISLYCGTSLYSFSYVGLSNNT---WLF 122
+F+ F+ + + + + FN LSD VIS G + Y F V LS+ T W
Sbjct: 198 VFNAHFYSSIMNEVAEKANAGFNISLSDYWGRVISRTLGDTTYGFPNVSLSSITSQEWYR 257
Query: 121 NLSRTFPLDHF 89
N + +P+ F
Sbjct: 258 NANFPYPIITF 268
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 27.5 bits (58), Expect = 0.87
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -2
Query: 163 SFSYVGLSNNTWLFNLSRTFPLDHFFFLALPPP 65
SF Y L NN++L +S + ++ F++ PPP
Sbjct: 1008 SFIYGSLQNNSFLSRVSPSSLEENVFYIQHPPP 1040
>SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein
Phf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 538
Score = 27.1 bits (57), Expect = 1.2
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +1
Query: 37 KKHRRRRKDPVAAKPRRRSGPKEKFVTS*TTRC 135
K HR DP+ P RR GP + V + +C
Sbjct: 203 KVHRPNHFDPLVKLPTRRRGPGRRPVVALAMKC 235
>SPAC821.05 |||translation initiation factor
eIF3h|Schizosaccharomyces pombe|chr 1|||Manual
Length = 357
Score = 27.1 bits (57), Expect = 1.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -3
Query: 144 YQTTPGCSTCHELFLWTTSSSWLCRHRILPSSSV 43
YQ TP HE WT SS L H + PS+ +
Sbjct: 156 YQLTPEFMAAHEEKTWTASS--LNSHNLTPSNVI 187
>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 732
Score = 25.4 bits (53), Expect = 3.5
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +3
Query: 198 PAVVSERLKVR-GSLARRALSSLGK--KVSSNR*SNTMG 305
P S+R+ V+ G R + S G SSNR SNTMG
Sbjct: 677 PPSTSKRISVQLGKKQARPVDSWGSTPNTSSNRNSNTMG 715
>SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 150
Score = 25.0 bits (52), Expect = 4.7
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = -2
Query: 196 VISLYCGTSLYSFSYV-GLSNNTWLFNLSRTFPLDHFFFLALPPP 65
V+ + C +L F ++ G+ N T P +F+ L PPP
Sbjct: 37 VVVIICIAALIFFFFIIGIINRRRTKKGQATIPFTNFYPLTAPPP 81
>SPAC2G11.13 |atg22||autophagy associated protein Atg22
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 529
Score = 25.0 bits (52), Expect = 4.7
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = -3
Query: 357 IVYATGSSPLVARV*ITCPWCWTTCLMRP 271
I+Y T ++P++ + +T CW L P
Sbjct: 260 ILYKTNNNPIILPITVTVCSCWWLILSTP 288
>SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1462
Score = 24.6 bits (51), Expect = 6.1
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -2
Query: 328 GRTCVDHLPMVLDYLFDETFFPKLESALLA 239
G C+D+LP +L L +T P + ALL+
Sbjct: 309 GNACIDYLPELLSVL--KTLLPGILLALLS 336
>SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual
Length = 503
Score = 24.2 bits (50), Expect = 8.1
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 142 SNNTWLFNLSRTFPLDHFFFLAL 74
S N+W+F L TF F+L+L
Sbjct: 316 SRNSWIFTLLLTFTQLTIFYLSL 338
>SPCC1753.04 |tol1||3'|Schizosaccharomyces pombe|chr 3|||Manual
Length = 353
Score = 24.2 bits (50), Expect = 8.1
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +2
Query: 227 PRFPGEKSTLELREKGLIKQVVQHHGQVIYTRATKGDDPV 346
P P + + E KG+I V++HG Y+ + +PV
Sbjct: 170 PNLPYDFNQPETSPKGIIMSAVRNHGCFQYSLHNEKLEPV 209
>SPAC25A8.01c ||snf2SR|fun thirty related protein
Fft3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 922
Score = 24.2 bits (50), Expect = 8.1
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -2
Query: 268 FPKLESALLAREPR 227
FP LESAL+ ++PR
Sbjct: 273 FPDLESALVVKQPR 286
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,549,597
Number of Sequences: 5004
Number of extensions: 31429
Number of successful extensions: 134
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 134
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 144287194
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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