Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10793
(413 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M64716-1|AAA16105.1| 125|Homo sapiens ribosomal protein protein. 81 2e-15
BC004986-1|AAH04986.1| 125|Homo sapiens ribosomal protein S25 p... 81 2e-15
BC004294-1|AAH04294.1| 125|Homo sapiens ribosomal protein S25 p... 81 2e-15
BC003537-1|AAH03537.1| 125|Homo sapiens ribosomal protein S25 p... 81 2e-15
AB061844-1|BAB79482.1| 125|Homo sapiens ribosomal protein S25 p... 81 2e-15
AK097034-1|BAC04932.1| 120|Homo sapiens protein ( Homo sapiens ... 31 2.0
AB083591-1|BAB89304.1| 233|Homo sapiens putative G-protein coup... 29 8.1
>M64716-1|AAA16105.1| 125|Homo sapiens ribosomal protein protein.
Length = 125
Score = 80.6 bits (190), Expect = 2e-15
Identities = 40/51 (78%), Positives = 42/51 (82%)
Frame = +3
Query: 120 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALSSLGKK 272
LNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL L K
Sbjct: 44 LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSK 94
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/31 (64%), Positives = 21/31 (67%)
Frame = +2
Query: 257 ELREKGLIKQVVQHHGQVIYTRATKGDDPVA 349
EL KGLIK V +H QVIYTR TKG D A
Sbjct: 90 ELLSKGLIKLVSKHRAQVIYTRNTKGGDAPA 120
>BC004986-1|AAH04986.1| 125|Homo sapiens ribosomal protein S25
protein.
Length = 125
Score = 80.6 bits (190), Expect = 2e-15
Identities = 40/51 (78%), Positives = 42/51 (82%)
Frame = +3
Query: 120 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALSSLGKK 272
LNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL L K
Sbjct: 44 LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSK 94
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/31 (64%), Positives = 21/31 (67%)
Frame = +2
Query: 257 ELREKGLIKQVVQHHGQVIYTRATKGDDPVA 349
EL KGLIK V +H QVIYTR TKG D A
Sbjct: 90 ELLSKGLIKLVSKHRAQVIYTRNTKGGDAPA 120
>BC004294-1|AAH04294.1| 125|Homo sapiens ribosomal protein S25
protein.
Length = 125
Score = 80.6 bits (190), Expect = 2e-15
Identities = 40/51 (78%), Positives = 42/51 (82%)
Frame = +3
Query: 120 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALSSLGKK 272
LNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL L K
Sbjct: 44 LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSK 94
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/31 (64%), Positives = 21/31 (67%)
Frame = +2
Query: 257 ELREKGLIKQVVQHHGQVIYTRATKGDDPVA 349
EL KGLIK V +H QVIYTR TKG D A
Sbjct: 90 ELLSKGLIKLVSKHRAQVIYTRNTKGGDAPA 120
>BC003537-1|AAH03537.1| 125|Homo sapiens ribosomal protein S25
protein.
Length = 125
Score = 80.6 bits (190), Expect = 2e-15
Identities = 40/51 (78%), Positives = 42/51 (82%)
Frame = +3
Query: 120 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALSSLGKK 272
LNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL L K
Sbjct: 44 LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSK 94
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/31 (64%), Positives = 21/31 (67%)
Frame = +2
Query: 257 ELREKGLIKQVVQHHGQVIYTRATKGDDPVA 349
EL KGLIK V +H QVIYTR TKG D A
Sbjct: 90 ELLSKGLIKLVSKHRAQVIYTRNTKGGDAPA 120
>AB061844-1|BAB79482.1| 125|Homo sapiens ribosomal protein S25
protein.
Length = 125
Score = 80.6 bits (190), Expect = 2e-15
Identities = 40/51 (78%), Positives = 42/51 (82%)
Frame = +3
Query: 120 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALSSLGKK 272
LNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL L K
Sbjct: 44 LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSK 94
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/31 (64%), Positives = 21/31 (67%)
Frame = +2
Query: 257 ELREKGLIKQVVQHHGQVIYTRATKGDDPVA 349
EL KGLIK V +H QVIYTR TKG D A
Sbjct: 90 ELLSKGLIKLVSKHRAQVIYTRNTKGGDAPA 120
>AK097034-1|BAC04932.1| 120|Homo sapiens protein ( Homo sapiens
cDNA FLJ39715 fis, clone SMINT2013228. ).
Length = 120
Score = 30.7 bits (66), Expect = 2.0
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 180 VGLPCTVSHTWVYQTTPGCSTCH 112
+GL T +HTW Y+ P CS C+
Sbjct: 20 LGLLHTHTHTWYYRCEPTCSACY 42
>AB083591-1|BAB89304.1| 233|Homo sapiens putative G-protein coupled
receptor protein.
Length = 233
Score = 28.7 bits (61), Expect = 8.1
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = -3
Query: 273 PFSLSSRVLFSPGNLGPLIFQIRQQV*LACTVGLPCTVSHT-WVYQTTP 130
P + + +L SP I + L CT+GL C+ SH W+ T P
Sbjct: 174 PKTQACLLLLSPAGTSCYISLLGALAFLPCTLGLGCSFSHVGWLLWTQP 222
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,130,781
Number of Sequences: 237096
Number of extensions: 1334895
Number of successful extensions: 2856
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2853
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3087725076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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