Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10790X
(366 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4GXI8 Cluster: Ribomsomal protein L13Ae; n=2; Neoptera... 48 4e-05
UniRef50_Q1HR63 Cluster: 60S ribosomal protein L13a; n=2; Aedes ... 44 0.001
UniRef50_P93099 Cluster: 60S ribosomal protein L13a; n=4; Eukary... 42 0.005
UniRef50_Q9VNE9 Cluster: 60S ribosomal protein L13A; n=127; Euka... 41 0.006
UniRef50_Q6RH10 Cluster: 60S ribosomal protein L13a; n=5; Magnol... 40 0.011
UniRef50_UPI0000EB39CE Cluster: UPI0000EB39CE related cluster; n... 36 0.17
UniRef50_Q75J15 Cluster: Putative ribosomal protein L13a; n=1; O... 34 0.70
UniRef50_Q245E7 Cluster: Ribosomal protein L13 containing protei... 33 1.2
UniRef50_UPI0000DA43CF Cluster: PREDICTED: similar to filaggrin ... 33 1.6
UniRef50_A4S5V9 Cluster: Ribosomal protein L13a, component of cy... 33 1.6
UniRef50_Q53K43 Cluster: Retrotransposon protein, putative, uncl... 33 2.1
UniRef50_A6S2I2 Cluster: Putative uncharacterized protein; n=2; ... 32 3.7
UniRef50_Q7R0D6 Cluster: GLP_608_8346_8939; n=1; Giardia lamblia... 31 4.9
>UniRef50_Q4GXI8 Cluster: Ribomsomal protein L13Ae; n=2;
Neoptera|Rep: Ribomsomal protein L13Ae - Cicindela
campestris (Green tiger beetle)
Length = 78
Score = 48.4 bits (110), Expect = 4e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +1
Query: 259 KPGRYFCHVGTLSRDIGWIYRDVVRTLEDKR 351
KPGR +CHVG LS ++GW Y+ V+ +LE KR
Sbjct: 6 KPGRKYCHVGRLSHEVGWKYQKVIESLEHKR 36
>UniRef50_Q1HR63 Cluster: 60S ribosomal protein L13a; n=2; Aedes
aegypti|Rep: 60S ribosomal protein L13a - Aedes aegypti
(Yellowfever mosquito)
Length = 236
Score = 43.6 bits (98), Expect = 0.001
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +1
Query: 259 KPGRYFCHVGTLSRDIGWIYRDVVRTLEDKR 351
+P R FC VG ++ ++GW YRDVV LE KR
Sbjct: 132 RPDRKFCDVGRVAHEVGWKYRDVVNNLEAKR 162
Score = 39.5 bits (88), Expect = 0.019
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +2
Query: 137 PHNTERGKXALRRLRTYNGCPPPFD 211
PH T+RG AL+RL+ Y G P PFD
Sbjct: 91 PHKTKRGHNALKRLKVYEGIPSPFD 115
>UniRef50_P93099 Cluster: 60S ribosomal protein L13a; n=4;
Eukaryota|Rep: 60S ribosomal protein L13a - Cyanophora
paradoxa
Length = 200
Score = 41.5 bits (93), Expect = 0.005
Identities = 16/31 (51%), Positives = 23/31 (74%)
Frame = +1
Query: 259 KPGRYFCHVGTLSRDIGWIYRDVVRTLEDKR 351
KPGR FC +G L+ ++GW + D+V LE+KR
Sbjct: 129 KPGRKFCVLGRLATEVGWRHSDLVTRLEEKR 159
Score = 38.3 bits (85), Expect = 0.043
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +2
Query: 137 PHNTERGKXALRRLRTYNGCPPPFD 211
PH T RG AL RL+ + G PPP+D
Sbjct: 88 PHKTPRGAAALERLKAFEGVPPPYD 112
>UniRef50_Q9VNE9 Cluster: 60S ribosomal protein L13A; n=127;
Eukaryota|Rep: 60S ribosomal protein L13A - Drosophila
melanogaster (Fruit fly)
Length = 205
Score = 41.1 bits (92), Expect = 0.006
Identities = 15/28 (53%), Positives = 22/28 (78%)
Frame = +1
Query: 268 RYFCHVGTLSRDIGWIYRDVVRTLEDKR 351
R +C VG LS ++GW Y+DV+++LE KR
Sbjct: 135 RKYCQVGRLSHEVGWHYQDVIKSLERKR 162
Score = 37.9 bits (84), Expect = 0.057
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +2
Query: 137 PHNTERGKXALRRLRTYNGCPPPFD 211
PH T+RG+ AL RLR ++G P P+D
Sbjct: 91 PHKTKRGQAALARLRVFDGIPSPYD 115
>UniRef50_Q6RH10 Cluster: 60S ribosomal protein L13a; n=5;
Magnoliophyta|Rep: 60S ribosomal protein L13a - Capsicum
annuum (Bell pepper)
Length = 220
Score = 40.3 bits (90), Expect = 0.011
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +2
Query: 137 PHNTERGKXALRRLRTYNGCPPPFD 211
PH T+RG AL RL+ Y G PPP+D
Sbjct: 94 PHKTKRGAAALARLKVYEGVPPPYD 118
Score = 37.1 bits (82), Expect = 0.099
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 265 GRYFCHVGTLSRDIGWIYRDVVRTLEDKRSGNA 363
G +C +G LS ++GW + D ++ LEDKR A
Sbjct: 137 GHKYCLLGKLSSEVGWNHYDTIKELEDKRKERA 169
>UniRef50_UPI0000EB39CE Cluster: UPI0000EB39CE related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB39CE UniRef100
entry - Canis familiaris
Length = 172
Score = 36.3 bits (80), Expect = 0.17
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +1
Query: 259 KPGRYFCHVGTLSRDIGWIYRDVVRTLEDKRSGNA 363
KP R F ++G L+ +GW Y+ V TLE+ R A
Sbjct: 99 KPTRKFAYLGRLAHKVGWKYQAVTATLEENRKEKA 133
>UniRef50_Q75J15 Cluster: Putative ribosomal protein L13a; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
ribosomal protein L13a - Oryza sativa subsp. japonica
(Rice)
Length = 172
Score = 34.3 bits (75), Expect = 0.70
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2
Query: 137 PHNTERGKXALRRLRTYNGCPPPFD 211
PH T+RG+ AL RL+ Y PP+D
Sbjct: 68 PHKTKRGEAALARLKAYEVVTPPYD 92
Score = 34.3 bits (75), Expect = 0.70
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +1
Query: 259 KPGRYFCHVGTLSRDIGWIYRDVVR 333
+PG +C +G LS+++GW Y D +R
Sbjct: 109 QPGHKYCLLGQLSKEVGWNYYDTIR 133
>UniRef50_Q245E7 Cluster: Ribosomal protein L13 containing protein;
n=16; Alveolata|Rep: Ribosomal protein L13 containing
protein - Tetrahymena thermophila SB210
Length = 270
Score = 33.5 bits (73), Expect = 1.2
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 137 PHNTERGKXALRRLRTYNGCPPPFD 211
PH T +G AL RL+ + G P P+D
Sbjct: 160 PHKTPKGAAALERLKIFEGIPTPYD 184
>UniRef50_UPI0000DA43CF Cluster: PREDICTED: similar to filaggrin 2;
n=1; Rattus norvegicus|Rep: PREDICTED: similar to
filaggrin 2 - Rattus norvegicus
Length = 242
Score = 33.1 bits (72), Expect = 1.6
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = -3
Query: 340 QAYEQHHGISIQYHGTVCPHDRNNGQVSEEDT*SSRHYNTPTGIKGRRAPIICT 179
Q Y QH G+S + T R+ G + S++ Y+ TG+ II T
Sbjct: 152 QEYHQHTGVSSAHRSTGTQEHRHTGASAHRSIISTQEYHQHTGVSSAHRSIIST 205
>UniRef50_A4S5V9 Cluster: Ribosomal protein L13a, component of
cytosolic 80S ribosome and 60S large subunit; n=2;
Ostreococcus|Rep: Ribosomal protein L13a, component of
cytosolic 80S ribosome and 60S large subunit -
Ostreococcus lucimarinus CCE9901
Length = 199
Score = 33.1 bits (72), Expect = 1.6
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 137 PHNTERGKXALRRLRTYNGCPPPFD 211
PH T RG A R + Y G P P+D
Sbjct: 87 PHKTVRGAAAFERFKAYEGIPAPYD 111
>UniRef50_Q53K43 Cluster: Retrotransposon protein, putative,
unclassified; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Retrotransposon protein, putative,
unclassified - Oryza sativa subsp. japonica (Rice)
Length = 512
Score = 32.7 bits (71), Expect = 2.1
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2
Query: 152 RGKXALRRLRTYNGCPPPFD 211
RG+ AL RL+ Y G PPP+D
Sbjct: 9 RGEAALARLKAYEGVPPPYD 28
>UniRef50_A6S2I2 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 554
Score = 31.9 bits (69), Expect = 3.7
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -3
Query: 325 HHGISIQYHGTVCPHDRNNGQVSEEDT*SSRHYNTPTGIKGRRAP 191
HH S HG + PH +N VS E + + ++T + I ++ P
Sbjct: 7 HHYPSTSRHGQLSPHQKNESTVSHEPSDTYSIHSTSSSIPSQQPP 51
>UniRef50_Q7R0D6 Cluster: GLP_608_8346_8939; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_608_8346_8939 - Giardia lamblia ATCC
50803
Length = 197
Score = 31.5 bits (68), Expect = 4.9
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 137 PHNTERGKXALRRLRTYNGCPP 202
P+ T RG A+ RLR Y+G PP
Sbjct: 86 PYKTVRGSDAMSRLRVYDGIPP 107
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 242,868,962
Number of Sequences: 1657284
Number of extensions: 3789279
Number of successful extensions: 8159
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 8030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8158
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 13220924981
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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