Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10790X
         (366 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   3.0  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   3.9  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   5.2  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   5.2  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    20   9.1  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    20   9.1  

>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.4 bits (43), Expect = 3.0
 Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
 Frame = -3

Query: 316 ISIQYHGTVCPHDRNNGQVSEEDT*SSRHYNTPTGIK--GRR 197
           +S  +  +  P  RN G VS E     +HY     +   GRR
Sbjct: 1   MSSYFANSYMPDMRNGGVVSAEHPHQHQHYGAAVQVPQGGRR 42


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 protein.
          Length = 980

 Score = 21.0 bits (42), Expect = 3.9
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -1

Query: 348  LVFKRTNNITVYPSNITGQCAH 283
            LVF    N+  +P N+ G   H
Sbjct: 951  LVFNPDQNVCDWPENVEGCMQH 972


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 20.6 bits (41), Expect = 5.2
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 304 YHGTVCPHDRNNGQVSEED 248
           YHG    +  NNG+ + ED
Sbjct: 25  YHGIWSTYRLNNGKFTVED 43


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 20.6 bits (41), Expect = 5.2
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -3

Query: 316 ISIQYHGTVCPHDRNNGQVSEEDT*SSRHY 227
           +S  +  +  P  RN G VS E     +HY
Sbjct: 1   MSSYFANSYMPDMRNGGVVSAEHPHQHQHY 30


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 19.8 bits (39), Expect = 9.1
 Identities = 6/27 (22%), Positives = 16/27 (59%)
 Frame = +2

Query: 251 FF*NLAVISVMWAHCPVILDGYTVMLF 331
           F  N  ++ +++++CP++  G   + F
Sbjct: 148 FVENEPILYLIFSYCPIVTTGIIKIQF 174


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 19.8 bits (39), Expect = 9.1
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -3

Query: 289 CPHDRNNGQVSEE 251
           CP  R NG+  EE
Sbjct: 493 CPVKRGNGRCDEE 505


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,286
Number of Sequences: 336
Number of extensions: 974
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7510735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)