Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10790X
(366 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein. 41 0.001
X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protei... 40 0.003
BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a ... 40 0.003
BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a ... 40 0.003
BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a ... 40 0.003
BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a ... 40 0.003
BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein. 40 0.003
BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a ... 40 0.003
BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a ... 40 0.003
BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a ... 40 0.003
AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA seq... 40 0.003
AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a ... 40 0.003
AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a ... 40 0.003
AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a ... 40 0.003
BC067891-1|AAH67891.1| 102|Homo sapiens Unknown (protein for MG... 32 0.49
>BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein.
Length = 142
Score = 41.1 bits (92), Expect = 0.001
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = +1
Query: 259 KPGRYFCHVGTLSRDIGWIYRDVVRTLEDKRSGNA 363
KP R F ++G L+ ++GW Y+ V TLEDKR A
Sbjct: 69 KPTRKFAYLGRLAHEVGWKYQAVTATLEDKRKEKA 103
Score = 39.5 bits (88), Expect = 0.003
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +2
Query: 137 PHNTERGKXALRRLRTYNGCPPPFD 211
PH T+RG+ AL RL+ ++G PPP+D
Sbjct: 28 PHKTKRGQAALDRLKVFDGIPPPYD 52
>X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protein
protein.
Length = 203
Score = 39.5 bits (88), Expect = 0.003
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +2
Query: 137 PHNTERGKXALRRLRTYNGCPPPFD 211
PH T+RG+ AL RL+ ++G PPP+D
Sbjct: 89 PHKTKRGQAALDRLKVFDGIPPPYD 113
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +1
Query: 259 KPGRYFCHVGTLSRDIGWIYRDVVRTLEDKRSGNA 363
KP R F ++G L+ ++GW Y+ V TLE+KR A
Sbjct: 130 KPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA 164
>BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 39.5 bits (88), Expect = 0.003
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +2
Query: 137 PHNTERGKXALRRLRTYNGCPPPFD 211
PH T+RG+ AL RL+ ++G PPP+D
Sbjct: 89 PHKTKRGQAALDRLKVFDGIPPPYD 113
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +1
Query: 259 KPGRYFCHVGTLSRDIGWIYRDVVRTLEDKRSGNA 363
KP R F ++G L+ ++GW Y+ V TLE+KR A
Sbjct: 130 KPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA 164
>BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 39.5 bits (88), Expect = 0.003
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +2
Query: 137 PHNTERGKXALRRLRTYNGCPPPFD 211
PH T+RG+ AL RL+ ++G PPP+D
Sbjct: 89 PHKTKRGQAALDRLKVFDGIPPPYD 113
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +1
Query: 259 KPGRYFCHVGTLSRDIGWIYRDVVRTLEDKRSGNA 363
KP R F ++G L+ ++GW Y+ V TLE+KR A
Sbjct: 130 KPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA 164
>BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 39.5 bits (88), Expect = 0.003
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +2
Query: 137 PHNTERGKXALRRLRTYNGCPPPFD 211
PH T+RG+ AL RL+ ++G PPP+D
Sbjct: 89 PHKTKRGQAALDRLKVFDGIPPPYD 113
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +1
Query: 259 KPGRYFCHVGTLSRDIGWIYRDVVRTLEDKRSGNA 363
KP R F ++G L+ ++GW Y+ V TLE+KR A
Sbjct: 130 KPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA 164
>BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 39.5 bits (88), Expect = 0.003
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +2
Query: 137 PHNTERGKXALRRLRTYNGCPPPFD 211
PH T+RG+ AL RL+ ++G PPP+D
Sbjct: 89 PHKTKRGQAALDRLKVFDGIPPPYD 113
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +1
Query: 259 KPGRYFCHVGTLSRDIGWIYRDVVRTLEDKRSGNA 363
KP R F ++G L+ ++GW Y+ V TLE+KR A
Sbjct: 130 KPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA 164
>BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein.
Length = 201
Score = 39.5 bits (88), Expect = 0.003
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +2
Query: 137 PHNTERGKXALRRLRTYNGCPPPFD 211
PH T+RG+ AL RL+ ++G PPP+D
Sbjct: 87 PHKTKRGQAALDRLKVFDGIPPPYD 111
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +1
Query: 259 KPGRYFCHVGTLSRDIGWIYRDVVRTLEDKRSGNA 363
KP R F ++G L+ ++GW Y+ V TLE+KR A
Sbjct: 128 KPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA 162
>BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 39.5 bits (88), Expect = 0.003
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +2
Query: 137 PHNTERGKXALRRLRTYNGCPPPFD 211
PH T+RG+ AL RL+ ++G PPP+D
Sbjct: 89 PHKTKRGQAALDRLKVFDGIPPPYD 113
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +1
Query: 259 KPGRYFCHVGTLSRDIGWIYRDVVRTLEDKRSGNA 363
KP R F ++G L+ ++GW Y+ V TLE+KR A
Sbjct: 130 KPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA 164
>BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 39.5 bits (88), Expect = 0.003
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +2
Query: 137 PHNTERGKXALRRLRTYNGCPPPFD 211
PH T+RG+ AL RL+ ++G PPP+D
Sbjct: 89 PHKTKRGQAALDRLKVFDGIPPPYD 113
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +1
Query: 259 KPGRYFCHVGTLSRDIGWIYRDVVRTLEDKRSGNA 363
KP R F ++G L+ ++GW Y+ V TLE+KR A
Sbjct: 130 KPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA 164
>BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 39.5 bits (88), Expect = 0.003
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +2
Query: 137 PHNTERGKXALRRLRTYNGCPPPFD 211
PH T+RG+ AL RL+ ++G PPP+D
Sbjct: 89 PHKTKRGQAALDRLKVFDGIPPPYD 113
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +1
Query: 259 KPGRYFCHVGTLSRDIGWIYRDVVRTLEDKRSGNA 363
KP R F ++G L+ ++GW Y+ V TLE+KR A
Sbjct: 130 KPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA 164
>AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA
sequence from clone RP11-365K22 on chromosome 13
Contains a novel gene similar to ribosomal protein L13a
(RPL13A). ).
Length = 203
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +1
Query: 259 KPGRYFCHVGTLSRDIGWIYRDVVRTLEDKRSGNA 363
KP R F ++G L+ ++GW Y+ V TLE+KR A
Sbjct: 130 KPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA 164
Score = 37.5 bits (83), Expect = 0.013
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +2
Query: 137 PHNTERGKXALRRLRTYNGCPPPFD 211
PH T+RG+ AL RL+ +G PPP+D
Sbjct: 89 PHKTKRGQAALDRLKVSDGIPPPYD 113
>AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a
variant protein.
Length = 203
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +1
Query: 259 KPGRYFCHVGTLSRDIGWIYRDVVRTLEDKRSGNA 363
KP R F ++G L+ ++GW Y+ V TLE+KR A
Sbjct: 130 KPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA 164
Score = 37.5 bits (83), Expect = 0.013
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +2
Query: 137 PHNTERGKXALRRLRTYNGCPPPFD 211
PH T+RG+ AL L+ ++G PPP+D
Sbjct: 89 PHKTKRGQAALDHLKVFDGIPPPYD 113
>AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a
protein.
Length = 142
Score = 39.5 bits (88), Expect = 0.003
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +2
Query: 137 PHNTERGKXALRRLRTYNGCPPPFD 211
PH T+RG+ AL RL+ ++G PPP+D
Sbjct: 28 PHKTKRGQAALDRLKVFDGIPPPYD 52
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +1
Query: 259 KPGRYFCHVGTLSRDIGWIYRDVVRTLEDKRSGNA 363
KP R F ++G L+ ++GW Y+ V TLE+KR A
Sbjct: 69 KPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA 103
>AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 39.5 bits (88), Expect = 0.003
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +2
Query: 137 PHNTERGKXALRRLRTYNGCPPPFD 211
PH T+RG+ AL RL+ ++G PPP+D
Sbjct: 89 PHKTKRGQAALDRLKVFDGIPPPYD 113
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +1
Query: 259 KPGRYFCHVGTLSRDIGWIYRDVVRTLEDKRSGNA 363
KP R F ++G L+ ++GW Y+ V TLE+KR A
Sbjct: 130 KPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA 164
>BC067891-1|AAH67891.1| 102|Homo sapiens Unknown (protein for
MGC:87657) protein.
Length = 102
Score = 32.3 bits (70), Expect = 0.49
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 259 KPGRYFCHVGTLSRDIGWIYRDVVRTLEDKRSGNA 363
KP R F +G ++++ W Y+ V TLE+KR A
Sbjct: 44 KPTRKFALLGRQAQEVRWKYQAVTATLEEKRKEKA 78
Score = 31.5 bits (68), Expect = 0.86
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 140 HNTERGKXALRRLRTYNGCPPPFD 211
H T+RG +L L+ ++G PPP+D
Sbjct: 4 HKTKRGHASLDCLKVFDGIPPPYD 27
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,435,605
Number of Sequences: 237096
Number of extensions: 606823
Number of successful extensions: 4773
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4773
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2306171440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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