Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10790X
         (366 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051640-1|AAK93064.1|  205|Drosophila melanogaster GM13948p pro...    41   4e-04
AE014297-307|AAF51987.1|  205|Drosophila melanogaster CG1475-PB ...    41   4e-04

>AY051640-1|AAK93064.1|  205|Drosophila melanogaster GM13948p
           protein.
          Length = 205

 Score = 41.1 bits (92), Expect = 4e-04
 Identities = 15/28 (53%), Positives = 22/28 (78%)
 Frame = +1

Query: 268 RYFCHVGTLSRDIGWIYRDVVRTLEDKR 351
           R +C VG LS ++GW Y+DV+++LE KR
Sbjct: 135 RKYCQVGRLSHEVGWHYQDVIKSLERKR 162



 Score = 37.9 bits (84), Expect = 0.004
 Identities = 14/25 (56%), Positives = 19/25 (76%)
 Frame = +2

Query: 137 PHNTERGKXALRRLRTYNGCPPPFD 211
           PH T+RG+ AL RLR ++G P P+D
Sbjct: 91  PHKTKRGQAALARLRVFDGIPSPYD 115


>AE014297-307|AAF51987.1|  205|Drosophila melanogaster CG1475-PB
           protein.
          Length = 205

 Score = 41.1 bits (92), Expect = 4e-04
 Identities = 15/28 (53%), Positives = 22/28 (78%)
 Frame = +1

Query: 268 RYFCHVGTLSRDIGWIYRDVVRTLEDKR 351
           R +C VG LS ++GW Y+DV+++LE KR
Sbjct: 135 RKYCQVGRLSHEVGWHYQDVIKSLERKR 162



 Score = 37.9 bits (84), Expect = 0.004
 Identities = 14/25 (56%), Positives = 19/25 (76%)
 Frame = +2

Query: 137 PHNTERGKXALRRLRTYNGCPPPFD 211
           PH T+RG+ AL RLR ++G P P+D
Sbjct: 91  PHKTKRGQAALARLRVFDGIPSPYD 115


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,383,805
Number of Sequences: 53049
Number of extensions: 200370
Number of successful extensions: 458
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 458
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 943048980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)