Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10778
(537 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces pomb... 50 2e-07
SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces po... 40 2e-04
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 38 0.001
SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 37 0.002
SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces po... 37 0.002
SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces po... 33 0.027
SPCC24B10.20 |||short chain dehydrogenase |Schizosaccharomyces p... 32 0.062
SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 29 0.44
SPCC16C4.16c |||conserved fungal protein|Schizosaccharomyces pom... 29 0.44
SPBC1709.07 |erg27||3-keto sterol reductase |Schizosaccharomyces... 28 0.77
SPACUNK4.16c |||alpha,alpha-trehalose-phosphate synthase |Schizo... 28 0.77
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 27 1.3
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 27 1.8
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 26 3.1
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 26 3.1
SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces po... 26 3.1
SPBC1604.21c |ptr3|uba1, SPBC211.09|ubiquitin activating enzyme ... 26 4.1
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 25 5.4
SPBC1709.08 |cft1||cleavage factor one Cft1 |Schizosaccharomyces... 25 7.2
SPCC1902.02 |mug72|SPCC663.16c|ketopantoate reductase |Schizosac... 25 9.5
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 25 9.5
SPBC20F10.05 |||DuF1740 family protein|Schizosaccharomyces pombe... 25 9.5
SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16 |S... 25 9.5
>SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 339
Score = 50.0 bits (114), Expect = 2e-07
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Frame = +1
Query: 271 LLKANMRVIIGIRNPELVHKLSESMENG---QNLEAYKLDLKSLKSVKEFADNVLHKYPK 441
L + +V + RN E K+ + + + + +LDL +SV + A++ + K K
Sbjct: 62 LARKGAKVYLAGRNEEKYQKVMKQIHDEVRHSKIRFLRLDLLDFESVYQAAESFIAKEEK 121
Query: 442 INLLVNNAGIMYGKYELTTDGFD 510
+++LVNNAGIM +ELT DG++
Sbjct: 122 LHILVNNAGIMNPPFELTKDGYE 144
>SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 39.9 bits (89), Expect = 2e-04
Identities = 21/62 (33%), Positives = 32/62 (51%)
Frame = +1
Query: 292 VIIGIRNPELVHKLSESMENGQNLEAYKLDLKSLKSVKEFADNVLHKYPKINLLVNNAGI 471
V R PE +L E ++ N+ KLD+ SL+S E A V K+++L N+GI
Sbjct: 33 VFASARKPEAATELQEWSKSHSNVHIIKLDISSLESANEAAQEVAKAVGKVDVLWVNSGI 92
Query: 472 MY 477
+
Sbjct: 93 FH 94
>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 37.9 bits (84), Expect = 0.001
Identities = 18/69 (26%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Frame = +1
Query: 280 ANMRVIIGIRNPELVHKLSESMENGQNLEAY--KLDLKSLKSVKEFADNVLHKYPKINLL 453
A +++I+ R V ++++ +E+ + KLD+ LKS+ +++ ++ I++L
Sbjct: 30 AKVKLILAARRFSTVEEIAKELESKYEVSVLPLKLDVSDLKSIPGVIESLPKEFADIDVL 89
Query: 454 VNNAGIMYG 480
+NNAG+ G
Sbjct: 90 INNAGLALG 98
>SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 236
Score = 36.7 bits (81), Expect = 0.002
Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +1
Query: 355 QNLEAYKLDLKSLKSVKEFADNVLHKYPKINLLVNNAGI-MYGKYELTTDGFDHN 516
+N+ +LD+ + S+K+ + + + +I++L+NNAG +Y E TT+ HN
Sbjct: 14 ENVLVTQLDVNNFSSIKKSVEKAISHFGRIDVLLNNAGYSVYSPLESTTEEQIHN 68
>SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 236
Score = 36.7 bits (81), Expect = 0.002
Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +1
Query: 355 QNLEAYKLDLKSLKSVKEFADNVLHKYPKINLLVNNAGI-MYGKYELTTDGFDHN 516
+N+ +LD+ + S+K+ + + + +I++L+NNAG +Y E TT+ HN
Sbjct: 14 ENVLVTQLDVNNFSSIKKSVEKAISHFGRIDVLLNNAGYSVYSPLESTTEEQIHN 68
>SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 33.1 bits (72), Expect = 0.027
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +1
Query: 292 VIIGIRNPELVHKLSESMENGQNLEAYKLDLKSLKSVKEFADNVLHKYPKINLLVNNAGI 471
V R P KL E ++ N+ KLD+ SL+S E A V +++L N+ +
Sbjct: 33 VFASARKPGAATKLQEWSKSHSNVHIIKLDVSSLESANEAAQEVTKVVDAVDVLWVNSAV 92
Query: 472 MY 477
+
Sbjct: 93 FH 94
>SPCC24B10.20 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 254
Score = 31.9 bits (69), Expect = 0.062
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +1
Query: 277 KANMRVIIGIRNPELVHKLSESMENGQNLEAYKLDLKSLKSVKEFADNVLHKYPKINLLV 456
K + V R P +L + + N+ KLD+ SL+S K+ A V I++L
Sbjct: 29 KEGVTVFASARGPGSASELKDWSKTHSNVHIIKLDVTSLRSAKDAAMQVEKVVKCIDVLW 88
Query: 457 NNAGI 471
N+GI
Sbjct: 89 VNSGI 93
>SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 292
Score = 29.1 bits (62), Expect = 0.44
Identities = 12/40 (30%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = +1
Query: 373 KLDLKSLKSVKEFADNVLHKYPKINLLVNNAGI-MYGKYE 489
KLD+ +KSV+ + ++ +++++NNAG + G++E
Sbjct: 53 KLDVTDVKSVETAFKDAKRRFGNVDIVINNAGYGLVGEFE 92
>SPCC16C4.16c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 161
Score = 29.1 bits (62), Expect = 0.44
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -2
Query: 191 SVPRHVNPVVNKATRPSALHVQRVPNLFQYMLDWFITVYIP 69
S P V + R +ALH+ V NL + + FI+ Y P
Sbjct: 20 STPLETEVVADTTLRKTALHLAGVDNLSEEQVKGFISAYAP 60
>SPBC1709.07 |erg27||3-keto sterol reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 338
Score = 28.3 bits (60), Expect = 0.77
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +1
Query: 361 LEAYKLDLKSLKSVKEFADNVLHKYPKINLLVNNAG 468
LE LDL ++ SV+ ++ ++PK++ + NAG
Sbjct: 69 LEYVLLDLSNMASVEAAVQDIATRFPKLDFVYLNAG 104
>SPACUNK4.16c |||alpha,alpha-trehalose-phosphate synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 944
Score = 28.3 bits (60), Expect = 0.77
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +1
Query: 250 RQEVIKGLLKANMRVIIGIRNPELVHKLSESMENGQNLEAYKLDLKSLKS 399
RQE++KG+L AN I+G + PE + ++ N++ K + S ++
Sbjct: 370 RQEILKGMLGAN---ILGFQIPEFAYHFLQTCSRLVNIDIRKNGVVSFEN 416
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 27.5 bits (58), Expect = 1.3
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +1
Query: 331 LSESMENGQNLEAYKLDLKSLKSVKEFA-DNVLHKYPKI 444
L+ES + G NLE LD + L+ VKE + DN K+ ++
Sbjct: 899 LAESQKQGVNLEVQTLD-RLLQKVKEHSEDNTKEKHQQL 936
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 27.1 bits (57), Expect = 1.8
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -2
Query: 536 PQVIHSEL*SKPSVVN-SYFPYIIPALLTSKFIFGYLCSTLSANSLTDFND 387
P+ H+ SK + + F + P T +F +C+ L A+SL + ND
Sbjct: 37 PEDSHAYRVSKSKTLEKASFTKVFPPSCTQLDVFSTICAPLIADSLVNMND 87
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 26.2 bits (55), Expect = 3.1
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 169 GLTCRGTELRYQMRPEKLRSLPAEEGHRQE 258
G R +EL+Y + PE RS+P EE +E
Sbjct: 426 GNYARASELQYAIIPELERSVPKEEKTLEE 455
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 26.2 bits (55), Expect = 3.1
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 313 PELVHKLSESMENGQNLEAYKLDLKSLKSVKEFADNVLHK 432
PE++ +LSE +++ + EA DL + V D +HK
Sbjct: 495 PEIIARLSEKLKDREESEAVTEDLIE-EVVNRLRDKAIHK 533
>SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 261
Score = 26.2 bits (55), Expect = 3.1
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = +1
Query: 316 ELVHKLSESMENGQNLEAYKLDLKSLKSVKEFADNVLHKYPKINLLVNNAGIMY 477
E KL+E E G + K+D+ +V+ + + + +I+++V NAG+ +
Sbjct: 59 EKAKKLAE--ETGVQVHTLKIDISRSDTVEAGVEEIQKIFKEIHVVVANAGMPF 110
>SPBC1604.21c |ptr3|uba1, SPBC211.09|ubiquitin activating enzyme
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1012
Score = 25.8 bits (54), Expect = 4.1
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = -2
Query: 509 SKPSVVNSYFPYIIPALLTSKFIFGYLCSTLSANSLT---DFNDF 384
SK + +N Y P + L+++++ + C ++ SLT + NDF
Sbjct: 98 SKLAELNQYVPVSVVDELSTEYLKNFKCVVVTETSLTKQLEINDF 142
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 25.4 bits (53), Expect = 5.4
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -2
Query: 245 PSSAGNDRNFSGRIW*RNSVPRHVNPVVNKATRP 144
P S GN +FSG+ W R+++P N VV T P
Sbjct: 35 PQSWGN--SFSGQAWLRDTIPSLSN-VVESQTIP 65
>SPBC1709.08 |cft1||cleavage factor one Cft1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1441
Score = 25.0 bits (52), Expect = 7.2
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = +1
Query: 352 GQNLEAYKLDLKSLKSVKEFADNVLHKYPKINLLVNNAGIMYGK 483
G + YK+DLKS + +K N L +L+ ++ ++ K
Sbjct: 678 GGGIALYKMDLKSQRLIKTDLQNRLSDVKTASLVSPDSSALFAK 721
>SPCC1902.02 |mug72|SPCC663.16c|ketopantoate reductase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 574
Score = 24.6 bits (51), Expect = 9.5
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -2
Query: 320 NSGLRIPMITRMFALSKPLMTSCRCPSSAGNDRNFSGRI 204
NS +IP + M LS PL+TS + G F GR+
Sbjct: 403 NSIYKIPSAS-MVNLSSPLVTSPSGLNPTGRPSRFGGRV 440
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 24.6 bits (51), Expect = 9.5
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +3
Query: 129 DMQGAGAGGLIDDWINVSRNRIALPD 206
D +G AGG+ +W+ V ++ PD
Sbjct: 2906 DEEGVDAGGVTREWLQVLARQMFNPD 2931
>SPBC20F10.05 |||DuF1740 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 972
Score = 24.6 bits (51), Expect = 9.5
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +1
Query: 148 RVALLTTGLTCRGTELRYQMRPEKLRSLPAEEGHRQEVIKGLLKANM 288
R+ L L GTE + + L S P +G +VI LLK M
Sbjct: 886 RIYLKILNLRLNGTEWVSAITTKALASCPCNKGVCMDVIDLLLKKEM 932
>SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 672
Score = 24.6 bits (51), Expect = 9.5
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -3
Query: 181 DTLIQSSIRPPAPAPCMSN 125
DTL S+IRP P+P N
Sbjct: 416 DTLSSSAIRPRTPSPSAEN 434
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,180,188
Number of Sequences: 5004
Number of extensions: 42738
Number of successful extensions: 120
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 120
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 222442660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -