Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10778
(537 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_14553| Best HMM Match : adh_short (HMM E-Value=4.2e-08) 56 2e-08
SB_52724| Best HMM Match : adh_short (HMM E-Value=5.1e-08) 54 6e-08
SB_56681| Best HMM Match : adh_short (HMM E-Value=0.035) 48 5e-06
SB_47084| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_6722| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 1e-05
SB_28806| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 2e-04
SB_21622| Best HMM Match : adh_short (HMM E-Value=3.1e-05) 40 0.001
SB_35940| Best HMM Match : adh_short (HMM E-Value=0.00021) 40 0.001
SB_44870| Best HMM Match : adh_short (HMM E-Value=5.4e-11) 37 0.009
SB_39237| Best HMM Match : adh_short (HMM E-Value=1.6e-11) 37 0.009
SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34) 36 0.028
SB_11966| Best HMM Match : adh_short (HMM E-Value=4.1e-32) 33 0.11
SB_9401| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_8042| Best HMM Match : DUF803 (HMM E-Value=0) 32 0.34
SB_26063| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.60
SB_44869| Best HMM Match : adh_short (HMM E-Value=5.4e-23) 30 1.0
SB_3252| Best HMM Match : adh_short (HMM E-Value=4.8e-10) 30 1.4
SB_34916| Best HMM Match : adh_short (HMM E-Value=4.8e-06) 29 1.8
SB_24494| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_37752| Best HMM Match : MFS_1 (HMM E-Value=0.11) 27 9.7
SB_24643| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_17844| Best HMM Match : Fibrinogen_C (HMM E-Value=0) 27 9.7
>SB_14553| Best HMM Match : adh_short (HMM E-Value=4.2e-08)
Length = 319
Score = 55.6 bits (128), Expect = 2e-08
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Frame = +1
Query: 235 AEEGHRQEVIKGLLKANMRVIIGIRNPELVHKLS---ESMENGQNLEAYKLDLKSLKSVK 405
A G +E L K RVIIG RN + + +S Q + LDL SL SV+
Sbjct: 45 ATTGIGKETAVDLAKRGARVIIGARNLDRGNTAVRDIQSRSGSQQVFVEHLDLASLSSVR 104
Query: 406 EFADNVLHKYPKINLLVNNAGIMYGKYELTTDGFD 510
+FA+ + +K +I++L+NNAG+ + + T DGF+
Sbjct: 105 KFAEVMNNKEERIHILINNAGVGFIPFRRTEDGFE 139
>SB_52724| Best HMM Match : adh_short (HMM E-Value=5.1e-08)
Length = 316
Score = 54.4 bits (125), Expect = 6e-08
Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Frame = +1
Query: 235 AEEGHRQEVIKGLLKANMRVIIGIRNPELVHKLSESME---NGQNLEAYKLDLKSLKSVK 405
A G +E L K RVIIG RN + + ++ Q + LDL SL SV+
Sbjct: 45 ATTGIGKETAVDLAKRGARVIIGARNLDRGNAAVRDIQASSGSQQVFVEHLDLASLSSVR 104
Query: 406 EFADNVLHKYPKINLLVNNAGIMYGKYELTTDGFD 510
+FA+ + K ++++L+NNAG+ + ++ T DGF+
Sbjct: 105 KFAEVINKKEERVDILMNNAGVAWIPFKRTEDGFE 139
>SB_56681| Best HMM Match : adh_short (HMM E-Value=0.035)
Length = 437
Score = 48.0 bits (109), Expect = 5e-06
Identities = 22/45 (48%), Positives = 29/45 (64%)
Frame = +1
Query: 376 LDLKSLKSVKEFADNVLHKYPKINLLVNNAGIMYGKYELTTDGFD 510
LDL L SV+EF + ++N+LVNNAG+M Y LT DGF+
Sbjct: 32 LDLSDLSSVREFVKSFHQSENQLNVLVNNAGVMLTPYALTKDGFE 76
>SB_47084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 355
Score = 46.8 bits (106), Expect = 1e-05
Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Frame = +1
Query: 271 LLKANMRVIIGIRNPELVHKLSESMENG---QNLEAYKLDLKSLKSVKEFADNVLHKYPK 441
L + RVI+ R+ E K + + + LDL SL SV++FA++V+ + +
Sbjct: 88 LARRGARVIMACRDLESAEKAASEIRYKVPKAEVVCRFLDLNSLISVRKFAEDVMREEKR 147
Query: 442 INLLVNNAGIMYGKYELTTDGFD 510
+++LVNNAG+ + T DGF+
Sbjct: 148 LDILVNNAGVYQPANKKTVDGFE 170
>SB_6722| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 320
Score = 46.4 bits (105), Expect = 1e-05
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Frame = +1
Query: 235 AEEGHRQEVIKGLLKANMRVIIGIRNPELVHKLS-ESMENGQNL--EAYKLDLKSLKSVK 405
A G EV + L RVI+ R+ K + E +++ N+ E KLDL S S++
Sbjct: 80 ANSGIGMEVARDLAWRKARVIMACRDVHKGMKAAAEIVQSAGNMDVEVKKLDLASFASIR 139
Query: 406 EFADNVLHKYPKINLLVNNAGIMYGKYELTTDGFDH 513
EFA V + ++++L+NNAG + G + T D ++
Sbjct: 140 EFAKEVNEEESRVDVLINNAGYL-GSQKKTVDKLEY 174
>SB_28806| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 614
Score = 42.3 bits (95), Expect = 2e-04
Identities = 22/61 (36%), Positives = 35/61 (57%)
Frame = +1
Query: 292 VIIGIRNPELVHKLSESMENGQNLEAYKLDLKSLKSVKEFADNVLHKYPKINLLVNNAGI 471
+I+ R+ E S+ G +E +KLD+ S S+ E +V KY +++LVNNAGI
Sbjct: 51 IILTARSDEQGEAACRSLNVGGRVEYHKLDVTSNDSIHELTLHVQEKYGGLDILVNNAGI 110
Query: 472 M 474
+
Sbjct: 111 L 111
>SB_21622| Best HMM Match : adh_short (HMM E-Value=3.1e-05)
Length = 493
Score = 39.9 bits (89), Expect = 0.001
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Frame = +1
Query: 235 AEEGHRQEVIKGLLKANMRVIIGIRNPELVHKLSESM--ENG-QNLEAYKLDLKSLKSVK 405
A G +E + L K+ V + R+ + + + + E+G QN+ + LD+ +V
Sbjct: 51 ANSGIGKETARALAKSGATVHMVCRDEQRGEQARQELLQESGNQNIYLHVLDMSQPSNVC 110
Query: 406 EFADNVLHKYPKINLLVNNAGIMYGKYELTTDGFDHN 516
+FA + +++LVNNAG M +T DG + N
Sbjct: 111 KFARDFAASNRPLHVLVNNAGCMVNTRTITEDGLEMN 147
>SB_35940| Best HMM Match : adh_short (HMM E-Value=0.00021)
Length = 181
Score = 39.9 bits (89), Expect = 0.001
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Frame = +1
Query: 235 AEEGHRQEVIKGLLKANMRVIIGIRNPELVHKLSESM--ENG-QNLEAYKLDLKSLKSVK 405
A G +E + L K+ V + R+ + + + + E+G QN+ + LD+ +V
Sbjct: 51 ANSGIGKETARALAKSGATVHMVCRDEQRGEQARQELLQESGNQNIYLHVLDMSQPSNVC 110
Query: 406 EFADNVLHKYPKINLLVNNAGIMYGKYELTTDGFDHN 516
+FA + +++LVNNAG M +T DG + N
Sbjct: 111 KFARDFAASNRPLHVLVNNAGCMVNTRTITEDGLEMN 147
>SB_44870| Best HMM Match : adh_short (HMM E-Value=5.4e-11)
Length = 236
Score = 37.1 bits (82), Expect = 0.009
Identities = 18/66 (27%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Frame = +1
Query: 280 ANMRVIIGI-RNPELVHKLSESMENG-QNLEAYKLDLKSLKSVKEFADNVLHKYPKINLL 453
AN +IG R+ + + K++E +G + + Y +D+ + ++VK+++ V+ + +LL
Sbjct: 29 ANGHTVIGCARSHDKIEKINEEFASGKEKRQFYVVDISNDEAVKQWSQQVMLDFGAPSLL 88
Query: 454 VNNAGI 471
+NN+G+
Sbjct: 89 INNSGV 94
>SB_39237| Best HMM Match : adh_short (HMM E-Value=1.6e-11)
Length = 305
Score = 37.1 bits (82), Expect = 0.009
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +1
Query: 355 QNLEAYKLDLKSLKSVKEFADNVLHKYPKINLLVNNAGIMYGKYELTTD 501
Q YK D S + + AD V + ++ +LVNNAGI+ GK L T+
Sbjct: 102 QKAFGYKCDCSSREDIYRVADIVKREVGEVTILVNNAGIVSGKKFLDTE 150
>SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34)
Length = 527
Score = 35.5 bits (78), Expect = 0.028
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Frame = +1
Query: 289 RVIIGIRNPELVHKLSESMEN--GQNLEAYKLDLKSLKSVKEFADNVLHKYPKINLLVNN 462
RV +RN + L + +N G L +LD+ S SV+E + + + +I++LVNN
Sbjct: 32 RVYATMRNLDKKGSLESACQNALGDTLFIRELDVSSDDSVEEALNAIYEEEGRIDILVNN 91
Query: 463 AGIMY-GKYELTT 498
AGI + G E T
Sbjct: 92 AGISHIGMLETQT 104
>SB_11966| Best HMM Match : adh_short (HMM E-Value=4.1e-32)
Length = 728
Score = 33.5 bits (73), Expect = 0.11
Identities = 21/97 (21%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Frame = +1
Query: 196 RYQMRPEKLRSLPAEEGHRQEVIKGLLKANMRVIIGIRNPELVHKLSESMEN-GQNLEAY 372
R +R E + A G + L K ++++ N E + +++ +++ G +
Sbjct: 30 RKSLRGETVLITGAASGIGRLTALILAKKGCKLVLWDINLEALKAVAQEIQDLGAETHYF 89
Query: 373 KLDLKSLKSVKEFADNVLHKYPKINLLVNNAGIMYGK 483
+ D++ V++ A+ V + + +L+NNAG++ GK
Sbjct: 90 ECDVRKKDEVEKVANAVEDQAGNVTILINNAGVVTGK 126
>SB_9401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 33.1 bits (72), Expect = 0.15
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +1
Query: 319 LVHKLSESMENGQNLEAYKLDLKSLKSVKEFADNVLHKYPKINLLVNNAGI 471
L+ K S +E+ N++ +LD+ S +SVK ++ K +I++LVNNAGI
Sbjct: 77 LLEKCSGVVEDLLNIK--ELDVCSDESVKAVVAEIVEKEGRIDVLVNNAGI 125
>SB_8042| Best HMM Match : DUF803 (HMM E-Value=0)
Length = 603
Score = 31.9 bits (69), Expect = 0.34
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +1
Query: 235 AEEGHRQEVIKGLLKANMRVIIGIRNPELVHKL-SESMENGQNLEAYKLDLKSLKSVKEF 411
A G V K L +A ++V + R E + +L E + NG + K D+ + ++
Sbjct: 112 ASSGIGAAVAKALAEAGVKVALAARREERLTQLRDEIIANGDVAISVKTDVTIKEQMESL 171
Query: 412 ADNVLHKYPKINLLVNNAGIMY 477
+++LV+ AG+MY
Sbjct: 172 VKRTDSTLGPVDILVSCAGVMY 193
>SB_26063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 426
Score = 31.1 bits (67), Expect = 0.60
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +1
Query: 289 RVIIGIRNPELVHKLSESMEN--GQNLEAYKLDLKSLKSVKEFADNVLHKYPKINLLVNN 462
+V +RN E L E+ G L +LD+ S +SV E ++ +I++LVNN
Sbjct: 225 KVYATMRNLEKRGILEEAARRQLGDTLIVKQLDVTSDESVTEVLQSIYSAERRIDVLVNN 284
Query: 463 AGI 471
AG+
Sbjct: 285 AGV 287
>SB_44869| Best HMM Match : adh_short (HMM E-Value=5.4e-23)
Length = 228
Score = 30.3 bits (65), Expect = 1.0
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +1
Query: 352 GQNLEAYKLDLKSLKSVKEFADNVLHKYPKINLLVNNAGIMYGK---YELTTDGFD 510
G+ + Y +D+ VKE+A NV + + ++NNAG + +E+T + FD
Sbjct: 50 GKPNQFYVVDITDDSVVKEWATNVCKSFGPPDFVLNNAGFVNQNAPLWEITAEEFD 105
>SB_3252| Best HMM Match : adh_short (HMM E-Value=4.8e-10)
Length = 289
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +1
Query: 337 ESMENGQNLEAYKLDLKSLKSVKEFADNVLHKYPKINLLVNNAGIM 474
E + +G E +LDL +L + ++ + +I++LVNNAG M
Sbjct: 82 EVVSHGVRAEIVQLDLGNLPEGALALEKLIQRLGRIDVLVNNAGAM 127
>SB_34916| Best HMM Match : adh_short (HMM E-Value=4.8e-06)
Length = 251
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = +1
Query: 358 NLEAYKLDLKSLKSVKEFADNV--LHKYPKINLLVNNAGIMYGK 483
NL ++LD+ S +S++E + + + ++LL+NNAG+ K
Sbjct: 58 NLHVFQLDVTSPESIREATEKATSILQGSGLSLLINNAGLFVNK 101
>SB_24494| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 518
Score = 28.3 bits (60), Expect = 4.2
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = -2
Query: 473 IIPALLTSKFIFGYLCSTLSANSLTDFN 390
I+P LLT K LCS L NS D N
Sbjct: 141 ILPLLLTQKQTRDVLCSALPGNSSLDLN 168
>SB_37752| Best HMM Match : MFS_1 (HMM E-Value=0.11)
Length = 302
Score = 27.1 bits (57), Expect = 9.7
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -2
Query: 470 IPALLTSKFIFGYLCSTLSANSLTDFNDFKSSL 372
IPAL+ S + GYL +L + +L+D K SL
Sbjct: 53 IPALVQSMYFVGYLFGSLLSGTLSDAFGRKISL 85
>SB_24643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 436
Score = 27.1 bits (57), Expect = 9.7
Identities = 14/55 (25%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +1
Query: 316 ELVHKLSESMENGQNLEAYKLDLKSLKSVKEFADNV--LHKYPKINLLVNNAGIM 474
E +L + QNL +L++ ++++ A+ + + +++LVNNAGI+
Sbjct: 45 ESASELKKLAAENQNLHLLELEVTDFQAIQRCAEQTREIVQEKGLHILVNNAGIL 99
>SB_17844| Best HMM Match : Fibrinogen_C (HMM E-Value=0)
Length = 1431
Score = 27.1 bits (57), Expect = 9.7
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +1
Query: 142 LGRVALLTTGLTCRGTELRYQMRPEKLRSLPAEEGH 249
LGR+ LTT T ELR M E++ + A+ GH
Sbjct: 47 LGRIHRLTTATT---NELRVDMEAEEVETAHAQYGH 79
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,517,823
Number of Sequences: 59808
Number of extensions: 307007
Number of successful extensions: 840
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 840
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1215643300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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