Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10776
(625 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 189 1e-48
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 189 1e-48
SB_56| Best HMM Match : Actin (HMM E-Value=0) 189 1e-48
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 189 1e-48
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 189 1e-48
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 161 6e-40
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 4e-17
SB_54| Best HMM Match : Actin (HMM E-Value=0) 69 3e-12
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 65 4e-11
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 52 3e-07
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 49 3e-06
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 44 8e-05
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 44 1e-04
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 42 4e-04
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_18737| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_37084| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.33
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 32 0.43
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 31 0.57
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 31 0.76
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 31 0.76
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 31 1.0
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 31 1.0
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 30 1.3
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 30 1.3
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 30 1.3
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 30 1.3
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_20112| Best HMM Match : EGF (HMM E-Value=0) 29 3.1
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 29 3.1
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 29 3.1
SB_55743| Best HMM Match : Phage_Coat_Gp8 (HMM E-Value=1.1) 29 4.1
SB_21216| Best HMM Match : Pox_A32 (HMM E-Value=0.01) 29 4.1
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 28 5.4
SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_49817| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_40142| Best HMM Match : DUF827 (HMM E-Value=1.2) 27 9.4
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 189 bits (461), Expect = 1e-48
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +2
Query: 257 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 436
GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG
Sbjct: 16 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 75
Query: 437 IVTNWDDMEKIWHHTFYNELRVAP 508
IVTNWDDMEKIWHHTFYNELRVAP
Sbjct: 76 IVTNWDDMEKIWHHTFYNELRVAP 99
Score = 85.4 bits (202), Expect = 3e-17
Identities = 38/40 (95%), Positives = 40/40 (100%)
Frame = +1
Query: 505 PQEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 624
P+EHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 138
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 189 bits (461), Expect = 1e-48
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +2
Query: 257 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 436
GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG
Sbjct: 15 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 74
Query: 437 IVTNWDDMEKIWHHTFYNELRVAP 508
IVTNWDDMEKIWHHTFYNELRVAP
Sbjct: 75 IVTNWDDMEKIWHHTFYNELRVAP 98
Score = 85.4 bits (202), Expect = 3e-17
Identities = 38/40 (95%), Positives = 40/40 (100%)
Frame = +1
Query: 505 PQEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 624
P+EHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 98 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 137
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 189 bits (461), Expect = 1e-48
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +2
Query: 257 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 436
GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG
Sbjct: 15 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 74
Query: 437 IVTNWDDMEKIWHHTFYNELRVAP 508
IVTNWDDMEKIWHHTFYNELRVAP
Sbjct: 75 IVTNWDDMEKIWHHTFYNELRVAP 98
Score = 85.4 bits (202), Expect = 3e-17
Identities = 38/40 (95%), Positives = 40/40 (100%)
Frame = +1
Query: 505 PQEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 624
P+EHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 98 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 137
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 189 bits (461), Expect = 1e-48
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +2
Query: 257 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 436
GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG
Sbjct: 16 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 75
Query: 437 IVTNWDDMEKIWHHTFYNELRVAP 508
IVTNWDDMEKIWHHTFYNELRVAP
Sbjct: 76 IVTNWDDMEKIWHHTFYNELRVAP 99
Score = 85.4 bits (202), Expect = 3e-17
Identities = 38/40 (95%), Positives = 40/40 (100%)
Frame = +1
Query: 505 PQEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 624
P+EHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 138
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = +3
Query: 213 MCDEEVAALVVDNG 254
MCD++VAALVVDNG
Sbjct: 1 MCDDDVAALVVDNG 14
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 189 bits (461), Expect = 1e-48
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +2
Query: 257 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 436
GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG
Sbjct: 16 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 75
Query: 437 IVTNWDDMEKIWHHTFYNELRVAP 508
IVTNWDDMEKIWHHTFYNELRVAP
Sbjct: 76 IVTNWDDMEKIWHHTFYNELRVAP 99
Score = 85.4 bits (202), Expect = 3e-17
Identities = 38/40 (95%), Positives = 40/40 (100%)
Frame = +1
Query: 505 PQEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 624
P+EHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 138
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 161 bits (390), Expect = 6e-40
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = +2
Query: 257 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 436
GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG
Sbjct: 15 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 74
Query: 437 IVTNWDDMEKIWHHTF 484
IVTNWDDMEKI TF
Sbjct: 75 IVTNWDDMEKIMFETF 90
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = +1
Query: 556 NREKMTQIMFETFNTPAMYVAIQ 624
N + M +IMFETFN+PAMYVAIQ
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQ 100
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 85.0 bits (201), Expect = 4e-17
Identities = 40/91 (43%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Frame = +2
Query: 257 GMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 430
G K G+AG + P +FPS+VGRP R + + KD VGDEA R +L + YP++
Sbjct: 16 GFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRYMLEVNYPMD 75
Query: 431 HGIVTNWDDMEKIWHHTF-YNELRVAPRNTQ 520
+GIV NWDDM+ +W +TF +++ + PRNT+
Sbjct: 76 NGIVRNWDDMKHVWDYTFGESKMNIDPRNTK 106
Score = 51.6 bits (118), Expect = 5e-07
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = +1
Query: 505 PQEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 624
P+ VLLTE PLNP NREKM ++MFE + +Y+AIQ
Sbjct: 102 PRNTKVLLTEPPLNPMKNREKMIEVMFENYQFEGVYIAIQ 141
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 68.9 bits (161), Expect = 3e-12
Identities = 29/41 (70%), Positives = 35/41 (85%)
Frame = +1
Query: 502 RPQEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 624
R ++ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+Q
Sbjct: 2142 RGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQ 2182
Score = 47.6 bits (108), Expect = 8e-06
Identities = 18/27 (66%), Positives = 23/27 (85%)
Frame = +2
Query: 257 GMCKAGFAGDDAPRAVFPSIVGRPRHQ 337
G CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2104 GFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 65.3 bits (152), Expect = 4e-11
Identities = 26/43 (60%), Positives = 35/43 (81%)
Frame = +1
Query: 496 ACRPQEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 624
A R +HPVLLTEAPLNP+ NREK ++ FETFN PA+++++Q
Sbjct: 121 AVRQVQHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQ 163
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/34 (70%), Positives = 25/34 (73%)
Frame = +2
Query: 236 VGSRQWPGMCKAGFAGDDAPRAVFPSIVGRPRHQ 337
VGS W K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1363 VGSHMW----KVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 49.2 bits (112), Expect = 3e-06
Identities = 22/55 (40%), Positives = 30/55 (54%)
Frame = +2
Query: 350 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPRN 514
G+ D ++GDEA K T K+PI H IV +WD ME+ W + LR P +
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPED 331
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 44.4 bits (100), Expect = 8e-05
Identities = 16/34 (47%), Positives = 26/34 (76%)
Frame = +1
Query: 514 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYV 615
HP+L++EA N + REK+T++MFE +N PA ++
Sbjct: 34 HPLLMSEAAWNTRIKREKLTELMFEKYNVPAFFL 67
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Frame = +2
Query: 257 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYVGDEAQSKRGILTL 415
G+ K GFAGD PR + P++VG P+ +++G + KD GD A +K G++ L
Sbjct: 710 GISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKYGDAAVAKSGVMHL 765
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 41.9 bits (94), Expect = 4e-04
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Frame = +2
Query: 257 GMC--KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKY--P 424
G C K GFA + APR++ P+ + + + + ++ ++GD+ + + L Y P
Sbjct: 241 GACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKDYSALFYVLP 292
Query: 425 IEHGIVTNWDDMEKIWHHTFYNE 493
+ G + NWD ++IW +TF E
Sbjct: 293 FQKGFLVNWDVEKQIWDYTFGKE 315
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 37.5 bits (83), Expect = 0.009
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = -1
Query: 334 MAGPSHDRGEHGARSIISCETGLAHTGPL 248
MA + D GE+G+ SI+S ETGLAHTG +
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAI 29
>SB_18737| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 696
Score = 32.7 bits (71), Expect = 0.25
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -3
Query: 206 LVKLVRCRCDKMKIKRPAVTANREKQIPIAGRCPCSTQC 90
L++L C C+K + KR + + Q+P C C C
Sbjct: 620 LLELTTCSCEKSRCKRDDLCPCKSNQMPCTEACQCMNTC 658
>SB_37084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1361
Score = 32.3 bits (70), Expect = 0.33
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -3
Query: 218 AHLELVKLVRCRCDKMKIKRPAVTANREKQIPIAGRCPCSTQ 93
A L L+KL CRC K +R + + + IP C C+++
Sbjct: 1296 APLSLLKLTTCRCVKTACRRDDLCSCKANDIPCTEACLCTSE 1337
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 31.9 bits (69), Expect = 0.43
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +1
Query: 577 IMFETFNTPAMYVAIQ 624
IMFE FN+PA+YVAIQ
Sbjct: 1 IMFEAFNSPAVYVAIQ 16
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 31.5 bits (68), Expect = 0.57
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 457 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 281
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 193 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 251
Query: 280 CETGLAHT 257
CET L T
Sbjct: 252 CETQLVPT 259
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 31.1 bits (67), Expect = 0.76
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 457 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 281
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 251 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 309
Query: 280 CETGLAHT 257
CET L T
Sbjct: 310 CETQLVLT 317
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 31.1 bits (67), Expect = 0.76
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 457 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 281
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 71 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 129
Query: 280 CETGLAHT 257
CET L T
Sbjct: 130 CETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 31.1 bits (67), Expect = 0.76
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 457 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 281
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 105 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 163
Query: 280 CETGLAHT 257
CET L T
Sbjct: 164 CETQLVLT 171
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 30.7 bits (66), Expect = 1.0
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 457 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 281
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 388 VVPVFKKSGKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 446
Query: 280 CETGLAHT 257
CET L T
Sbjct: 447 CETQLVLT 454
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 30.7 bits (66), Expect = 1.0
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 457 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 281
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 229 VVPVFKKSGKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 287
Query: 280 CETGLAHT 257
CET L T
Sbjct: 288 CETQLVLT 295
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 30.7 bits (66), Expect = 1.0
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 457 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 281
V+PV S D + S +C ++LSH + H M D +HG RS S
Sbjct: 153 VVPVFKKSSKDNPENYRPISLTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFS 211
Query: 280 CETGLAHT 257
CET L T
Sbjct: 212 CETQLVLT 219
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 30.3 bits (65), Expect = 1.3
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -1
Query: 484 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 317
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 210 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 268
Query: 316 DRGEHGARSIISCETGLAHT 257
+HG R +SCET L T
Sbjct: 269 SIFQHGFRQALSCETQLVLT 288
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 30.3 bits (65), Expect = 1.3
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -1
Query: 484 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 317
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 71 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 129
Query: 316 DRGEHGARSIISCETGLAHT 257
+HG R +SCET L T
Sbjct: 130 SIFQHGFRQALSCETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 30.3 bits (65), Expect = 1.3
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -1
Query: 484 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 317
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 1609 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 1667
Query: 316 DRGEHGARSIISCETGLAHT 257
+HG R +SCET L T
Sbjct: 1668 SIFQHGFRQALSCETQLVLT 1687
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 30.3 bits (65), Expect = 1.3
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -1
Query: 484 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 317
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 637 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 695
Query: 316 DRGEHGARSIISCETGLAHT 257
+HG R +SCET L T
Sbjct: 696 SIFQHGFRQALSCETQLVLT 715
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 30.3 bits (65), Expect = 1.3
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -1
Query: 484 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 317
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 1047 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 1105
Query: 316 DRGEHGARSIISCETGLAHT 257
+HG R +SCET L T
Sbjct: 1106 SIFQHGFRQALSCETQLVLT 1125
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 30.3 bits (65), Expect = 1.3
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -1
Query: 484 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 317
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 71 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 129
Query: 316 DRGEHGARSIISCETGLAHT 257
+HG R +SCET L T
Sbjct: 130 SIFQHGFRQALSCETQLVLT 149
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -1
Query: 391 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 257
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 94 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_20112| Best HMM Match : EGF (HMM E-Value=0)
Length = 2112
Score = 29.1 bits (62), Expect = 3.1
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +2
Query: 230 CRVGSRQWPGMCKAGFAGDDAPRAVF 307
C+ G+ ++ +C GF+GDD R V+
Sbjct: 966 CKDGAGEYTCLCPHGFSGDDCERRVY 991
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 29.1 bits (62), Expect = 3.1
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 457 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 281
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 204 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 262
Query: 280 CETGLAHT 257
CET L T
Sbjct: 263 CETQLVLT 270
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 29.1 bits (62), Expect = 3.1
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 457 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 281
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 2 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 60
Query: 280 CETGLAHT 257
CET L T
Sbjct: 61 CETQLVLT 68
>SB_55743| Best HMM Match : Phage_Coat_Gp8 (HMM E-Value=1.1)
Length = 213
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -1
Query: 328 GPSHDRGEHGARSIISCETGLAHTGPLSTTNAATSSSHIL 209
GPS +G G R+ G+ HT P +N+A S+S ++
Sbjct: 93 GPSEPQGREGLRARADDAFGITHT-PAPESNSAWSASSVI 131
>SB_21216| Best HMM Match : Pox_A32 (HMM E-Value=0.01)
Length = 1062
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -1
Query: 328 GPSHDRGEHGARSIISCETGLAHTGPLSTTNAATSSSHIL 209
GPS +G G R+ G+ HT P +N+A S+S ++
Sbjct: 818 GPSEPQGREGLRARADDAFGITHT-PAPESNSAWSASSVI 856
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 28.3 bits (60), Expect = 5.4
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = -1
Query: 397 FALCLISYI--RVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 266
FA CL + V+LSH + H L A +HG R+ SCET L
Sbjct: 462 FATCLACKVMKHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQL 506
>SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1486
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 498 VSPPGTPSPAH*GSPQPQGQQREDDPD 578
+ PPG P P PQP ++ +D D
Sbjct: 1275 MQPPGPPGPPGPPGPQPSNKREHEDDD 1301
>SB_49817| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 563
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +2
Query: 176 CHTYILLISLIQDVRRRSCRVGSRQWPGMCKAGFAGDDAPRAVFPSIV 319
C T L ++L++D+ R V P + GF G PR + S++
Sbjct: 270 CATCSLPLNLVEDLVNRPSLVAKFPLPRITTFGFGGQFVPRKLIESLL 317
>SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3142
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -1
Query: 391 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 257
LC + ++LSH + H L +HG R +SCET L T
Sbjct: 857 LCCKTMEHIVLSHLNKH-LSRFNILSNAQHGFRQGLSCETQLVLT 900
>SB_40142| Best HMM Match : DUF827 (HMM E-Value=1.2)
Length = 334
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 477 IPSTMSCVSPPGTPSP-AH*GSPQPQGQQREDDPDHVRN 590
IP T + S P TPSP + P+PQ +R D + RN
Sbjct: 186 IPLTPATPSTPSTPSPTSETPRPRPQPPKRSDSFNIKRN 224
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,574,599
Number of Sequences: 59808
Number of extensions: 499144
Number of successful extensions: 1655
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1643
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1548368000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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