Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10776
(625 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 180 7e-46
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 180 7e-46
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 180 9e-46
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 180 9e-46
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 180 9e-46
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 180 9e-46
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 177 6e-45
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 177 6e-45
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 177 6e-45
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 167 5e-42
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 123 1e-28
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 99 2e-21
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 92 2e-19
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 64 5e-11
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 58 5e-09
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 54 6e-08
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 43 1e-04
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 39 0.003
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 38 0.004
At3g07870.1 68416.m00962 F-box family protein contains F-box dom... 29 3.3
At1g16690.2 68414.m01999 transcription factor-related similar to... 28 4.4
At1g16690.1 68414.m01998 transcription factor-related similar to... 28 4.4
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 28 5.8
At2g22330.1 68415.m02649 cytochrome P450, putative similar to cy... 28 5.8
At3g18810.1 68416.m02389 protein kinase family protein contains ... 27 7.7
At2g25680.1 68415.m03078 expressed protein ; expression supporte... 27 7.7
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 180 bits (438), Expect = 7e-46
Identities = 80/84 (95%), Positives = 82/84 (97%)
Frame = +2
Query: 257 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 436
GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHG
Sbjct: 17 GMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHG 76
Query: 437 IVTNWDDMEKIWHHTFYNELRVAP 508
IV+NWDDMEKIWHHTFYNELRVAP
Sbjct: 77 IVSNWDDMEKIWHHTFYNELRVAP 100
Score = 85.0 bits (201), Expect = 4e-17
Identities = 38/40 (95%), Positives = 39/40 (97%)
Frame = +1
Query: 505 PQEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 624
P+EHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQ
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQ 139
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 180 bits (438), Expect = 7e-46
Identities = 80/84 (95%), Positives = 82/84 (97%)
Frame = +2
Query: 257 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 436
GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHG
Sbjct: 17 GMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHG 76
Query: 437 IVTNWDDMEKIWHHTFYNELRVAP 508
IV+NWDDMEKIWHHTFYNELRVAP
Sbjct: 77 IVSNWDDMEKIWHHTFYNELRVAP 100
Score = 87.0 bits (206), Expect = 9e-18
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +1
Query: 505 PQEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 624
P+EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 139
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 180 bits (437), Expect = 9e-46
Identities = 80/84 (95%), Positives = 81/84 (96%)
Frame = +2
Query: 257 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 436
GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHG
Sbjct: 17 GMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHG 76
Query: 437 IVTNWDDMEKIWHHTFYNELRVAP 508
IV NWDDMEKIWHHTFYNELRVAP
Sbjct: 77 IVNNWDDMEKIWHHTFYNELRVAP 100
Score = 87.0 bits (206), Expect = 9e-18
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +1
Query: 505 PQEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 624
P+EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 139
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 180 bits (437), Expect = 9e-46
Identities = 80/84 (95%), Positives = 81/84 (96%)
Frame = +2
Query: 257 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 436
GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHG
Sbjct: 17 GMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHG 76
Query: 437 IVTNWDDMEKIWHHTFYNELRVAP 508
IV NWDDMEKIWHHTFYNELRVAP
Sbjct: 77 IVNNWDDMEKIWHHTFYNELRVAP 100
Score = 84.6 bits (200), Expect = 5e-17
Identities = 37/40 (92%), Positives = 39/40 (97%)
Frame = +1
Query: 505 PQEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 624
P+EHP+LLTEAPLNPKANREKMTQIMFETFN PAMYVAIQ
Sbjct: 100 PEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQ 139
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 180 bits (437), Expect = 9e-46
Identities = 80/84 (95%), Positives = 81/84 (96%)
Frame = +2
Query: 257 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 436
GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHG
Sbjct: 17 GMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHG 76
Query: 437 IVTNWDDMEKIWHHTFYNELRVAP 508
IV NWDDMEKIWHHTFYNELRVAP
Sbjct: 77 IVNNWDDMEKIWHHTFYNELRVAP 100
Score = 87.0 bits (206), Expect = 9e-18
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +1
Query: 505 PQEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 624
P+EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 139
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 180 bits (437), Expect = 9e-46
Identities = 80/84 (95%), Positives = 81/84 (96%)
Frame = +2
Query: 257 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 436
GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHG
Sbjct: 17 GMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHG 76
Query: 437 IVTNWDDMEKIWHHTFYNELRVAP 508
IV NWDDMEKIWHHTFYNELRVAP
Sbjct: 77 IVNNWDDMEKIWHHTFYNELRVAP 100
Score = 84.6 bits (200), Expect = 5e-17
Identities = 37/40 (92%), Positives = 39/40 (97%)
Frame = +1
Query: 505 PQEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 624
P+EHP+LLTEAPLNPKANREKMTQIMFETFN PAMYVAIQ
Sbjct: 100 PEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQ 139
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 177 bits (430), Expect = 6e-45
Identities = 76/84 (90%), Positives = 81/84 (96%)
Frame = +2
Query: 257 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 436
GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKRGILTLKYPIEHG
Sbjct: 17 GMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHG 76
Query: 437 IVTNWDDMEKIWHHTFYNELRVAP 508
+V+NWDDMEKIWHHTFYNELR+AP
Sbjct: 77 VVSNWDDMEKIWHHTFYNELRIAP 100
Score = 85.4 bits (202), Expect = 3e-17
Identities = 38/40 (95%), Positives = 40/40 (100%)
Frame = +1
Query: 505 PQEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 624
P+EHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 139
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 177 bits (430), Expect = 6e-45
Identities = 76/84 (90%), Positives = 81/84 (96%)
Frame = +2
Query: 257 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 436
GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKRGILTLKYPIEHG
Sbjct: 17 GMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHG 76
Query: 437 IVTNWDDMEKIWHHTFYNELRVAP 508
+V+NWDDMEKIWHHTFYNELR+AP
Sbjct: 77 VVSNWDDMEKIWHHTFYNELRIAP 100
Score = 85.4 bits (202), Expect = 3e-17
Identities = 38/40 (95%), Positives = 40/40 (100%)
Frame = +1
Query: 505 PQEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 624
P+EHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 139
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 177 bits (430), Expect = 6e-45
Identities = 76/84 (90%), Positives = 81/84 (96%)
Frame = +2
Query: 257 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 436
GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKRGILTLKYPIEHG
Sbjct: 17 GMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHG 76
Query: 437 IVTNWDDMEKIWHHTFYNELRVAP 508
+V+NWDDMEKIWHHTFYNELR+AP
Sbjct: 77 VVSNWDDMEKIWHHTFYNELRIAP 100
Score = 85.4 bits (202), Expect = 3e-17
Identities = 38/40 (95%), Positives = 40/40 (100%)
Frame = +1
Query: 505 PQEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 624
P+EHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 139
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 167 bits (406), Expect = 5e-42
Identities = 70/84 (83%), Positives = 81/84 (96%)
Frame = +2
Query: 257 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 436
GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ++RGIL+LKYPIEHG
Sbjct: 18 GMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARRGILSLKYPIEHG 77
Query: 437 IVTNWDDMEKIWHHTFYNELRVAP 508
+V+NWDDMEKIWHHTFYNELR+ P
Sbjct: 78 VVSNWDDMEKIWHHTFYNELRLEP 101
Score = 74.1 bits (174), Expect = 7e-14
Identities = 31/40 (77%), Positives = 36/40 (90%)
Frame = +1
Query: 505 PQEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 624
P+EHP+LLTEAPLNPK NREKMTQIMFE+F P+MY+ IQ
Sbjct: 101 PEEHPILLTEAPLNPKVNREKMTQIMFESFAFPSMYIGIQ 140
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 123 bits (296), Expect = 1e-28
Identities = 55/84 (65%), Positives = 65/84 (77%)
Frame = +2
Query: 257 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 436
GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E + R ILTLK P+EHG
Sbjct: 11 GMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDILTLKDPMEHG 65
Query: 437 IVTNWDDMEKIWHHTFYNELRVAP 508
IV NWDDMEKIWH+TFYNELRV P
Sbjct: 66 IVNNWDDMEKIWHYTFYNELRVDP 89
Score = 77.0 bits (181), Expect = 1e-14
Identities = 33/40 (82%), Positives = 38/40 (95%)
Frame = +1
Query: 505 PQEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 624
P+EHPVLLTEAP NPKANREKMTQIMFE+F+ PAMYV++Q
Sbjct: 89 PEEHPVLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQ 128
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 99.1 bits (236), Expect = 2e-21
Identities = 39/55 (70%), Positives = 50/55 (90%)
Frame = +2
Query: 344 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 508
MVGM + D +VGD+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAP
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAP 55
Score = 75.4 bits (177), Expect = 3e-14
Identities = 32/40 (80%), Positives = 37/40 (92%)
Frame = +1
Query: 505 PQEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 624
P+EHPVLLTEAPLNPKA+REKMTQIMFETF P+MY+ +Q
Sbjct: 55 PEEHPVLLTEAPLNPKADREKMTQIMFETFAVPSMYIGMQ 94
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 92.3 bits (219), Expect = 2e-19
Identities = 40/86 (46%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
Frame = +2
Query: 257 GMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 430
G K GFAG++ P +VFP +VGRP R++ ++ KD VG+ R L + YP+
Sbjct: 14 GYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELRHQLDINYPVH 73
Query: 431 HGIVTNWDDMEKIWHHTFYNELRVAP 508
+GIV NWDDME +W H FYNEL++ P
Sbjct: 74 NGIVQNWDDMEHVWDHAFYNELKINP 99
Score = 47.2 bits (107), Expect = 9e-06
Identities = 19/40 (47%), Positives = 27/40 (67%)
Frame = +1
Query: 505 PQEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 624
P + +LLT+ PLNP NREKM + MFE +N +++ IQ
Sbjct: 99 PSDCKILLTDPPLNPSKNREKMIETMFEKYNFAGVFIQIQ 138
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 64.5 bits (150), Expect = 5e-11
Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 16/98 (16%)
Frame = +2
Query: 263 CKAGFAGDDAPRAVFPSIVGRPRHQGVMVG---------------MGQKDSYVGDEAQS- 394
CKAG+AG+DAP+AVFPS+VG G+ + G++ Y G +A +
Sbjct: 19 CKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEKGKRKLYTGSQALNF 78
Query: 395 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 508
+R + + P + GIVT+WD ++ +W H F N L + P
Sbjct: 79 RRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDP 116
Score = 32.3 bits (70), Expect = 0.27
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1
Query: 505 PQEHPVLLTEAPLNPKANREK 567
P EHP+LL E PLN + REK
Sbjct: 116 PTEHPMLLAEPPLNSQQQREK 136
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 58.0 bits (134), Expect = 5e-09
Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 22/104 (21%)
Frame = +2
Query: 263 CKAGFAGDDAPRAVFPSIVGRPRHQGVM--------VGMGQKDS-------------YVG 379
CKAG+AG+DAP+AVFPS++G M +DS YVG
Sbjct: 19 CKAGYAGEDAPKAVFPSVIGAVDGVEAMDVDVDSTKTNSNSEDSKTESEKEKSKRKLYVG 78
Query: 380 DEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 508
+A S +R + + PI+ GIV++WD ++ IW H F + L + P
Sbjct: 79 SQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDP 122
Score = 49.2 bits (112), Expect = 2e-06
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = +1
Query: 505 PQEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVA 618
P EHP+LL E PLN + REK ++MFE + PA+++A
Sbjct: 122 PTEHPMLLAEPPLNTQQQREKAAELMFEKYKVPALFMA 159
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 54.4 bits (125), Expect = 6e-08
Identities = 21/41 (51%), Positives = 30/41 (73%)
Frame = +1
Query: 499 CRPQEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAI 621
C P++H LLTE+PL P +RE +I+FETFN P +Y+A+
Sbjct: 115 CDPEDHYFLLTESPLTPPESREYTGEILFETFNVPGLYIAV 155
Score = 52.0 bits (119), Expect = 3e-07
Identities = 26/53 (49%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Frame = +2
Query: 365 DSYVGDEAQSK-RGILT--LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPRN 514
D Y+GDEA +K R T L YPIEHG V +WD ME+ W +N LR P +
Sbjct: 67 DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPED 119
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 43.2 bits (97), Expect = 1e-04
Identities = 15/33 (45%), Positives = 24/33 (72%)
Frame = +1
Query: 511 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAM 609
+HP+L+TE NP +R KM +++FET+ PA+
Sbjct: 116 DHPILITECACNPVQSRSKMAELLFETYGVPAV 148
Score = 34.7 bits (76), Expect = 0.050
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Frame = +2
Query: 266 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL-----KYPIE 430
+ G+AG+ PR VF +IV RPRH+ G+ + VGD S + P +
Sbjct: 32 RIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGDLDPSMMKYFDCTRSGPRSPFD 87
Query: 431 HGIVTNWDDMEKIWHHTF 484
+V ++ ME I + F
Sbjct: 88 SNVVYQFEIMEYILDYAF 105
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 38.7 bits (86), Expect = 0.003
Identities = 23/87 (26%), Positives = 40/87 (45%)
Frame = +2
Query: 257 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 436
G+ KAG G+ P V P+ + +P + + + DE ++ PI+ G
Sbjct: 12 GLIKAGQGGERDPTTVIPNCLYKPLSSKKFIHPSPLTT-LSDEIDLTSA--AVRRPIDRG 68
Query: 437 IVTNWDDMEKIWHHTFYNELRVAPRNT 517
+ N D +IW H F + L +AP ++
Sbjct: 69 YLINSDLQREIWSHLFTSLLHIAPSSS 95
Score = 31.1 bits (67), Expect = 0.62
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +1
Query: 505 PQEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVA 618
P +LLTEAPL+ + + +++FE F ++Y+A
Sbjct: 92 PSSSSLLLTEAPLSIPSVQRTTDELVFEDFGFSSLYIA 129
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 38.3 bits (85), Expect = 0.004
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +1
Query: 511 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 624
E +L T+ PKA RE++ Q+MFETFN Y + Q
Sbjct: 88 EGNILFTDPLCTPKAIREQLVQLMFETFNVSGFYASEQ 125
Score = 28.7 bits (61), Expect = 3.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 422 PIEHGIVTNWDDMEKIWHHTFYNEL 496
PIE G++ +WD ME + + Y L
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGL 81
>At3g07870.1 68416.m00962 F-box family protein contains F-box domain
Pfam:PF00646
Length = 417
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -2
Query: 333 WRGLPTIEGNTARGASSPAKPALHIPGHCLLPTR 232
WR + T G + +SSP KP L + HC P R
Sbjct: 55 WRSVLTQHGRLSSSSSSPTKPCLLL--HCDSPIR 86
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +2
Query: 380 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 508
D A L++KY + H I + W + +IW L+ P
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +2
Query: 380 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 508
D A L++KY + H I + W + +IW L+ P
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -2
Query: 468 IFSMSSQLVTIPCSMGYLRVRIPLLLCASS 379
IFS SS+LVT P S+ +R R ++L SS
Sbjct: 10 IFSSSSRLVTTPSSVFPIRQRRRIILVTSS 39
>At2g22330.1 68415.m02649 cytochrome P450, putative similar to
cytochrome P450 79B2 (SP:O81346) [Arabidopsis thaliana]
Length = 543
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -1
Query: 460 HVIPVSDDSVFDGVFEGQDTSFALCLISYIRVLLSH 353
HVIPV+ + +F+ QD FA ++Y + +LS+
Sbjct: 104 HVIPVTCPKIAREIFKQQDALFASRPLTYAQKILSN 139
>At3g18810.1 68416.m02389 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 700
Score = 27.5 bits (58), Expect = 7.7
Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = +3
Query: 480 PSTMSCVSPPGTPSP--AH*GSPQPQGQQREDDP 575
PS S SPP P P + GSPQP + P
Sbjct: 32 PSDSSSPSPPAPPPPDDSSNGSPQPPSSDSQSPP 65
>At2g25680.1 68415.m03078 expressed protein ; expression supported
by MPSS
Length = 456
Score = 27.5 bits (58), Expect = 7.7
Identities = 21/67 (31%), Positives = 33/67 (49%)
Frame = -1
Query: 568 SSLCWPWG*GEPQ*AGLGVPGGDTQLIVEGMMPNLLHVIPVSDDSVFDGVFEGQDTSFAL 389
SS +G E AG+ G L + G+M + ++IP+S V G+ Q +FA+
Sbjct: 99 SSTAEDFGIPEIMAAGICTGGILFVLGISGLMQLVFNIIPLS---VVRGIQLSQGLAFAM 155
Query: 388 CLISYIR 368
+ YIR
Sbjct: 156 SAVKYIR 162
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,803,846
Number of Sequences: 28952
Number of extensions: 319045
Number of successful extensions: 1008
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1005
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1265787216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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