Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10772X
         (304 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   2.8  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       20   5.0  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    20   6.6  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    19   8.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    19   8.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    19   8.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    19   8.7  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 2.8
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -2

Query: 57  GDNHNLGHFVL 25
           GD HN+GH ++
Sbjct: 360 GDFHNMGHILI 370


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 20.2 bits (40), Expect = 5.0
 Identities = 5/11 (45%), Positives = 7/11 (63%)
 Frame = +3

Query: 30 QNVQDCDYRPC 62
          +N+ DC   PC
Sbjct: 67 ENINDCKVNPC 77


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 19.8 bits (39), Expect = 6.6
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -2

Query: 57  GDNHNLGH 34
           GD HN+GH
Sbjct: 360 GDLHNMGH 367


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = -2

Query: 63   SKGDNHNLG 37
            S+GD+H+LG
Sbjct: 1171 SRGDHHHLG 1179


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = -2

Query: 63   SKGDNHNLG 37
            S+GD+H+LG
Sbjct: 1171 SRGDHHHLG 1179


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = -2

Query: 63   SKGDNHNLG 37
            S+GD+H+LG
Sbjct: 1171 SRGDHHHLG 1179


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = -2

Query: 63   SKGDNHNLG 37
            S+GD+H+LG
Sbjct: 1171 SRGDHHHLG 1179


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,445
Number of Sequences: 336
Number of extensions: 233
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5412171
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)