Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10733
(364 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62913 Cluster: 60S ribosomal protein L11; n=156; Eukar... 153 1e-36
UniRef50_UPI000155375A Cluster: PREDICTED: similar to ribosomal ... 149 1e-35
UniRef50_P0C0W9 Cluster: 60S ribosomal protein L11-A; n=25; Euka... 134 6e-31
UniRef50_P42794 Cluster: 60S ribosomal protein L11-2; n=38; Euka... 129 2e-29
UniRef50_UPI00015BB1AB Cluster: LSU ribosomal protein L5P; n=1; ... 81 8e-15
UniRef50_A0DI11 Cluster: Chromosome undetermined scaffold_51, wh... 80 1e-14
UniRef50_O28367 Cluster: 50S ribosomal protein L5P; n=1; Archaeo... 79 2e-14
UniRef50_Q46GA8 Cluster: 50S ribosomal protein L5P; n=3; Methano... 78 4e-14
UniRef50_Q8PV37 Cluster: 50S ribosomal protein L5P; n=6; Methano... 77 7e-14
UniRef50_Q74N79 Cluster: 50S ribosomal protein L5P; n=1; Nanoarc... 75 5e-13
UniRef50_A5UL75 Cluster: Ribosomal protein L5p; n=1; Methanobrev... 74 7e-13
UniRef50_A0RVY6 Cluster: Ribosomal protein L5; n=1; Cenarchaeum ... 74 7e-13
UniRef50_A3H987 Cluster: Ribosomal protein L5; n=1; Caldivirga m... 74 9e-13
UniRef50_Q673R5 Cluster: Ribosomal protein L5/L11; n=2; environm... 72 3e-12
UniRef50_A7DSY1 Cluster: Ribosomal protein L5; n=1; Candidatus N... 69 2e-11
UniRef50_Q9YF87 Cluster: 50S ribosomal protein L5P; n=20; Archae... 69 2e-11
UniRef50_P14124 Cluster: 50S ribosomal protein L5P; n=5; Halobac... 69 3e-11
UniRef50_Q6LXE0 Cluster: 50S ribosomal protein L5P; n=7; Euryarc... 66 2e-10
UniRef50_Q6CKT5 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 60 2e-08
UniRef50_Q3LWF5 Cluster: Ribosomal protein L11; n=1; Bigelowiell... 56 1e-07
UniRef50_Q6L1B4 Cluster: 50S ribosomal protein L5P; n=4; Thermop... 48 4e-05
UniRef50_Q01C63 Cluster: Chromosome 03 contig 1, DNA sequence; n... 47 1e-04
UniRef50_Q7R5U0 Cluster: GLP_81_173473_174138; n=1; Giardia lamb... 42 0.003
UniRef50_Q9MAT2 Cluster: F13M7.17; n=1; Arabidopsis thaliana|Rep... 38 0.072
UniRef50_Q4FLN0 Cluster: 50S ribosomal protein L5; n=3; Bacteria... 36 0.22
UniRef50_Q9CMP7 Cluster: Uncharacterized protein PM0768 precurso... 33 1.2
UniRef50_A6D0I6 Cluster: Putative uncharacterized protein; n=1; ... 33 1.6
UniRef50_A0RPV7 Cluster: Wbgx protein; n=3; Campylobacter|Rep: W... 33 2.1
UniRef50_A7P1Q7 Cluster: Chromosome chr19 scaffold_4, whole geno... 32 2.7
UniRef50_Q30TV2 Cluster: 50S ribosomal protein L5; n=2; Epsilonp... 32 2.7
UniRef50_Q5L5G9 Cluster: Putative transmembrane protein; n=2; Ch... 32 3.6
UniRef50_A0UYZ7 Cluster: FolC bifunctional protein; n=1; Clostri... 32 3.6
UniRef50_Q9LQE5 Cluster: F15O4.40; n=2; Arabidopsis thaliana|Rep... 32 3.6
UniRef50_Q9SA01 Cluster: Putative F-box protein At1g31075; n=1; ... 32 3.6
UniRef50_O73804 Cluster: Putative uncharacterized protein; n=2; ... 31 4.8
UniRef50_Q74GJ5 Cluster: Putative uncharacterized protein; n=1; ... 31 4.8
UniRef50_A0X5X1 Cluster: Flp pilus assembly protein ATPase CpaE-... 31 4.8
UniRef50_Q42196 Cluster: 60S ribosomal protein L11; n=1; Arabido... 31 6.3
>UniRef50_P62913 Cluster: 60S ribosomal protein L11; n=156;
Eukaryota|Rep: 60S ribosomal protein L11 - Homo sapiens
(Human)
Length = 178
Score = 153 bits (370), Expect = 1e-36
Identities = 68/87 (78%), Positives = 81/87 (93%)
Frame = +1
Query: 1 VRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDHSIGIYGLDFYVV 180
VRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYD SIGIYGLDFYVV
Sbjct: 74 VRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVV 133
Query: 181 LGRPGFNVAHRRRKTGKVGFPHRLTRK 261
LGRPGF++A ++R+TG +G HR++++
Sbjct: 134 LGRPGFSIADKKRRTGCIGAKHRISKE 160
Score = 33.9 bits (74), Expect = 0.89
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = +3
Query: 255 KEDAMKWFQQKYDG 296
KE+AM+WFQQKYDG
Sbjct: 159 KEEAMRWFQQKYDG 172
>UniRef50_UPI000155375A Cluster: PREDICTED: similar to ribosomal
protein L11; n=1; Mus musculus|Rep: PREDICTED: similar
to ribosomal protein L11 - Mus musculus
Length = 279
Score = 149 bits (362), Expect = 1e-35
Identities = 67/87 (77%), Positives = 80/87 (91%)
Frame = +1
Query: 1 VRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDHSIGIYGLDFYVV 180
VRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYD SIGIYGLDFYVV
Sbjct: 128 VRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVV 187
Query: 181 LGRPGFNVAHRRRKTGKVGFPHRLTRK 261
LGR GF++A ++R+TG +G HR++++
Sbjct: 188 LGRSGFSIADKKRRTGCIGAKHRISKE 214
Score = 30.7 bits (66), Expect = 8.3
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3
Query: 255 KEDAMKWFQQKYDG 296
KE+AM+WFQQKY G
Sbjct: 213 KEEAMRWFQQKYAG 226
>UniRef50_P0C0W9 Cluster: 60S ribosomal protein L11-A; n=25;
Eukaryota|Rep: 60S ribosomal protein L11-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 174
Score = 134 bits (323), Expect = 6e-31
Identities = 62/87 (71%), Positives = 71/87 (81%)
Frame = +1
Query: 1 VRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDHSIGIYGLDFYVV 180
VRG KAEEILERGLKV+EY+LR NFSATGNFGFGI EHIDLGIKYD SIGI+G+DFYVV
Sbjct: 71 VRGPKAEEILERGLKVKEYQLRDRNFSATGNFGFGIDEHIDLGIKYDPSIGIFGMDFYVV 130
Query: 181 LGRPGFNVAHRRRKTGKVGFPHRLTRK 261
+ RPG V R+R G VG H+ T++
Sbjct: 131 MNRPGARVTRRKRCKGTVGNSHKTTKE 157
>UniRef50_P42794 Cluster: 60S ribosomal protein L11-2; n=38;
Eukaryota|Rep: 60S ribosomal protein L11-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 182
Score = 129 bits (311), Expect = 2e-29
Identities = 61/86 (70%), Positives = 69/86 (80%)
Frame = +1
Query: 1 VRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDHSIGIYGLDFYVV 180
VRG KA ++LE GLKV+EYEL R NFS TG FGFGIQEHIDLGIKYD S GIYG+DFYVV
Sbjct: 73 VRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVV 132
Query: 181 LGRPGFNVAHRRRKTGKVGFPHRLTR 258
L RPG+ VA RRR +VG HR+T+
Sbjct: 133 LERPGYRVARRRRCKTRVGIQHRVTK 158
Score = 31.9 bits (69), Expect = 3.6
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 234 GISPPPHKEDAMKWFQQKYDG 296
GI K+DAMKWFQ KY+G
Sbjct: 151 GIQHRVTKDDAMKWFQVKYEG 171
>UniRef50_UPI00015BB1AB Cluster: LSU ribosomal protein L5P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L5P - Ignicoccus hospitalis KIN4/I
Length = 198
Score = 80.6 bits (190), Expect = 8e-15
Identities = 35/88 (39%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Frame = +1
Query: 1 VRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDHSIGIYGLDFYV 177
+RG +A E L++ L+ ++++ +F GN GFGI+EHI + G +YD +GI+G+D +
Sbjct: 95 LRGQRAVEFLKKALEAVGWKIKASSFDEFGNVGFGIREHIQIPGTRYDPRVGIFGMDVIL 154
Query: 178 VLGRPGFNVAHRRRKTGKVGFPHRLTRK 261
+ RPG+ VA RRR K+ HR+T++
Sbjct: 155 TIERPGYRVARRRRARSKIPRRHRVTKE 182
>UniRef50_A0DI11 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_51,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 197
Score = 79.8 bits (188), Expect = 1e-14
Identities = 37/79 (46%), Positives = 52/79 (65%)
Frame = +1
Query: 1 VRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDHSIGIYGLDFYVV 180
+RG +A +IL RGL+V+E EL++ NFS +GNFGFGIQEHIDLG+KYD GI+
Sbjct: 101 IRGDQARDILVRGLRVKEMELKKRNFSESGNFGFGIQEHIDLGLKYDPYTGIFRYGLLCC 160
Query: 181 LGRPGFNVAHRRRKTGKVG 237
+ + ++ K K+G
Sbjct: 161 VVKTRIESCSKKIKKFKIG 179
>UniRef50_O28367 Cluster: 50S ribosomal protein L5P; n=1;
Archaeoglobus fulgidus|Rep: 50S ribosomal protein L5P -
Archaeoglobus fulgidus
Length = 178
Score = 79.0 bits (186), Expect = 2e-14
Identities = 41/88 (46%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Frame = +1
Query: 1 VRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDHSIGIYGLDFYV 177
+RG KA + L+ L V+E L R + G F FGI EHIDL G+ YD +GI+G+D V
Sbjct: 78 LRGEKALKFLKDALTVKENRLSRKSIGE-GYFAFGIAEHIDLPGVDYDPDVGIFGMDVCV 136
Query: 178 VLGRPGFNVAHRRRKTGKVGFPHRLTRK 261
L R G+ VA RRRK K+ HR+T++
Sbjct: 137 SLKRRGYRVARRRRKKAKIATSHRVTKE 164
>UniRef50_Q46GA8 Cluster: 50S ribosomal protein L5P; n=3;
Methanomicrobia|Rep: 50S ribosomal protein L5P -
Methanosarcina barkeri (strain Fusaro / DSM 804)
Length = 169
Score = 78.2 bits (184), Expect = 4e-14
Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 VRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDHSIGIYGLDFYV 177
+RG +A++ LE L + + L R F + GN FGI+EH D G+KYD +IG++G+D V
Sbjct: 67 LRGQRAQQFLETALGIVDKTLVRSQFDSLGNVSFGIEEHTDFPGMKYDPNIGVFGMDVTV 126
Query: 178 VLGRPGFNVAHRRRKTGKVGFPHRLT 255
V+ RPG + RR T K+ HR+T
Sbjct: 127 VIKRPGERICKRRIATRKIPTNHRVT 152
>UniRef50_Q8PV37 Cluster: 50S ribosomal protein L5P; n=6;
Methanomicrobia|Rep: 50S ribosomal protein L5P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 169
Score = 77.4 bits (182), Expect = 7e-14
Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 VRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDHSIGIYGLDFYV 177
+RG +A+E L ++ E L R F + GN FGI+EH D G++YD +IG++G+D V
Sbjct: 67 LRGQRAQEFLGTSFEIIEKTLSRAQFDSLGNVSFGIEEHTDFPGMRYDPNIGVFGMDVTV 126
Query: 178 VLGRPGFNVAHRRRKTGKVGFPHRLT 255
VL RPG + RR T K+ HR+T
Sbjct: 127 VLKRPGERICKRRIATRKIPTDHRVT 152
>UniRef50_Q74N79 Cluster: 50S ribosomal protein L5P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L5P -
Nanoarchaeum equitans
Length = 169
Score = 74.5 bits (175), Expect = 5e-13
Identities = 40/89 (44%), Positives = 59/89 (66%), Gaps = 2/89 (2%)
Frame = +1
Query: 1 VRGAKAEEIL-ERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDHSIGIYGLDFY 174
+RG KA +IL E+ L +++++ +F+ G FGFGI E+I + G+KYD +G+ GL+ Y
Sbjct: 67 LRGEKAYKILKEKLLPAVDFKIKASSFTDRG-FGFGIPEYIMIPGMKYDPELGLIGLEAY 125
Query: 175 VVLGRPGFNVAHRRRKTGKVGFPHRLTRK 261
V L RPG+ V RR K KVG HRL ++
Sbjct: 126 VTLERPGYRVERRRIKRSKVGSRHRLNKE 154
>UniRef50_A5UL75 Cluster: Ribosomal protein L5p; n=1;
Methanobrevibacter smithii ATCC 35061|Rep: Ribosomal
protein L5p - Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861)
Length = 170
Score = 74.1 bits (174), Expect = 7e-13
Identities = 37/103 (35%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Frame = +1
Query: 1 VRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDHSIGIYGLDFYV 177
+RG KA++ +E L+ ++ F A GN FGI+EHID+ G+KY+ IGI+G++ V
Sbjct: 66 LRGEKADKAIEMVLEGINKNIKPTQFDAQGNLSFGIKEHIDIPGMKYNPDIGIFGMNVSV 125
Query: 178 VLGRPGFNVAHRRRKTGKVGFPHRLTRKML*SGSNRNMMVSYL 306
+PG+ +A RR + KV HR++++ N V+Y+
Sbjct: 126 TFEKPGYRIAKRRIQQKKVPAKHRISKEETMKYMEDNFNVNYV 168
>UniRef50_A0RVY6 Cluster: Ribosomal protein L5; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L5 - Cenarchaeum
symbiosum
Length = 169
Score = 74.1 bits (174), Expect = 7e-13
Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 VRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDHSIGIYGLDFYV 177
+RG A + R + + +++ +F GNF FGI EHID+ GIKYD IGI GLD +
Sbjct: 67 IRGEDAGALARRLFEAKGGQVKGRSFDDFGNFSFGIGEHIDIPGIKYDPGIGILGLDVCM 126
Query: 178 VLGRPGFNVAHRRRKTGKVGFPHRLT 255
L RPG+ + R + +VG HR+T
Sbjct: 127 TLSRPGYGIRKRSKHKARVGRSHRIT 152
>UniRef50_A3H987 Cluster: Ribosomal protein L5; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L5 -
Caldivirga maquilingensis IC-167
Length = 197
Score = 73.7 bits (173), Expect = 9e-13
Identities = 39/88 (44%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Frame = +1
Query: 1 VRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDHSIGIYGLDFYV 177
+R +A L R L ++ LR ++F+A GN FGI+EHI + G +YD ++GI+G D V
Sbjct: 94 LRRNEAVWFLLRALAAVDFTLREESFNA-GNVSFGIREHILVPGSRYDPALGIFGFDVAV 152
Query: 178 VLGRPGFNVAHRRRKTGKVGFPHRLTRK 261
L RPGF V +RRR VG HR++R+
Sbjct: 153 TLARPGFRVQYRRRARADVGKDHRVSRE 180
>UniRef50_Q673R5 Cluster: Ribosomal protein L5/L11; n=2;
environmental samples|Rep: Ribosomal protein L5/L11 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 168
Score = 72.1 bits (169), Expect = 3e-12
Identities = 38/81 (46%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Frame = +1
Query: 13 KAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGI-KYDHSIGIYGLDFYVVLGR 189
K + L+ VRE L NF +GN FGI ++ D KYD IGIYG+D VVL R
Sbjct: 68 KVQSFLKDAFWVRENTLPSYNFDQSGNLSFGIADYTDFPAQKYDPDIGIYGMDVNVVLER 127
Query: 190 PGFNVAHRRRKTGKVGFPHRL 252
PG V+ RRR+ KVG HR+
Sbjct: 128 PGHRVSRRRRRGVKVGVEHRV 148
>UniRef50_A7DSY1 Cluster: Ribosomal protein L5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 173
Score = 69.3 bits (162), Expect = 2e-11
Identities = 35/86 (40%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 VRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDHSIGIYGLDFYV 177
+RG A+ +L+R L+ + + F GN+ FGI+EHID+ G+KY+ SIGI GL V
Sbjct: 71 IRGDDAKALLKRLLEAKGNTVNGRAFDNFGNYSFGIREHIDIPGVKYEPSIGILGLGISV 130
Query: 178 VLGRPGFNVAHRRRKTGKVGFPHRLT 255
L RPG+ + R + VG H +T
Sbjct: 131 TLTRPGYGIRTRSKHKASVGKSHIIT 156
>UniRef50_Q9YF87 Cluster: 50S ribosomal protein L5P; n=20;
Archaea|Rep: 50S ribosomal protein L5P - Aeropyrum
pernix
Length = 192
Score = 69.3 bits (162), Expect = 2e-11
Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Frame = +1
Query: 1 VRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDHSIGIYGLDFYV 177
+RG KA L+R L + ++ + GN FGI+EHI + G+KYD +GI G+D +
Sbjct: 89 LRGEKALNFLKRALDAVGHRIKTSSIDEHGNVSFGIEEHILIPGVKYDPRVGILGMDVAI 148
Query: 178 VLGRPGFNVAHRRR-KTGKVGFPHRLTRK 261
+ RPG + RRR + G + HR+TR+
Sbjct: 149 TIQRPGHRIVERRRQRRGHIPRRHRVTRE 177
>UniRef50_P14124 Cluster: 50S ribosomal protein L5P; n=5;
Halobacteriaceae|Rep: 50S ribosomal protein L5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 177
Score = 68.9 bits (161), Expect = 3e-11
Identities = 38/85 (44%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 VRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDHSIGIYGLDFYV 177
+R AEE L+ L + E L F TGNF FG++EH + +YD SIGIYGLD V
Sbjct: 76 LRDEMAEEFLQTALPLAE--LATSQFDDTGNFSFGVEEHTEFPSQEYDPSIGIYGLDVTV 133
Query: 178 VLGRPGFNVAHRRRKTGKVGFPHRL 252
L RPG+ VA R + + + HRL
Sbjct: 134 NLVRPGYRVAKRDKASRSIPTKHRL 158
>UniRef50_Q6LXE0 Cluster: 50S ribosomal protein L5P; n=7;
Euryarchaeota|Rep: 50S ribosomal protein L5P -
Methanococcus maripaludis
Length = 181
Score = 66.1 bits (154), Expect = 2e-10
Identities = 36/90 (40%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Frame = +1
Query: 1 VRGAKAEEILERGL---KVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDHSIGIYGLD 168
+RG KAEE L+ K L +F GNF FG+ EHID G KYD S+GIYG+D
Sbjct: 74 LRGKKAEEFLKNAFTAFKACGKTLFASSFDQVGNFSFGVPEHIDFPGQKYDPSVGIYGMD 133
Query: 169 FYVVLGRPGFNVAHRRRKTGKVGFPHRLTR 258
V + G+ V R+ K + H +T+
Sbjct: 134 ICVTFEKSGYRVKSRKVKRSHIPEKHLVTK 163
>UniRef50_Q6CKT5 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 191
Score = 59.7 bits (138), Expect = 2e-08
Identities = 25/59 (42%), Positives = 40/59 (67%)
Frame = -2
Query: 195 TWPAKYDVKVQSINSN*VIVLDTQVNVFLNTEAKITRGGEVVTPQFIFSDFQTPLKDFF 19
TW +V++ ++N++ +VLDTQ++VFL+TE ++T EV Q +F D QT +DFF
Sbjct: 44 TWSTHDNVEIHTVNTDTWVVLDTQIDVFLDTETEVTGSREVSVSQLVFLDLQTSFQDFF 102
>UniRef50_Q3LWF5 Cluster: Ribosomal protein L11; n=1; Bigelowiella
natans|Rep: Ribosomal protein L11 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 139
Score = 56.4 bits (130), Expect = 1e-07
Identities = 23/68 (33%), Positives = 40/68 (58%)
Frame = +1
Query: 28 LERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDHSIGIYGLDFYVVLGRPGFNVA 207
L + LK++ + + NFS T FG GI +H++LG +D IGI+G++ L R G+ +
Sbjct: 72 LYKMLKLKTFTINESNFSLTSTFGIGISDHLELGYNFDQKIGIHGINIIGDLSRRGYRIK 131
Query: 208 HRRRKTGK 231
++ + K
Sbjct: 132 LKKEQDPK 139
>UniRef50_Q6L1B4 Cluster: 50S ribosomal protein L5P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L5P -
Picrophilus torridus
Length = 176
Score = 48.4 bits (110), Expect = 4e-05
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Frame = +1
Query: 1 VRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDHSIGIYGLDFYV 177
+R A L+ ++Y++ +F GN FGI ++ D G+KYD IGI+G+D +
Sbjct: 71 LRKDDALSFLKEAFYAKDYKIPVYSFDKNGNAYFGISDYTDFKGMKYDPDIGIFGMDIAI 130
Query: 178 VL-GRPGFNVAHRRRKTGKVGFPHRL 252
V R G+ + RR K K+ P ++
Sbjct: 131 VFRRRGGYRIEKRRIK--KMHIPKKM 154
>UniRef50_Q01C63 Cluster: Chromosome 03 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 03 contig 1, DNA
sequence - Ostreococcus tauri
Length = 363
Score = 46.8 bits (106), Expect = 1e-04
Identities = 24/66 (36%), Positives = 41/66 (62%)
Frame = -2
Query: 222 LTPSVCYVETWPAKYDVKVQSINSN*VIVLDTQVNVFLNTEAKITRGGEVVTPQFIFSDF 43
LTP+V V ++DV++ +++ +VLD +VNVF +TE ++TRG EV +F F
Sbjct: 65 LTPAVDSVAR-ALQHDVEIHTVDPCGRVVLDAEVNVFADTETEVTRGAEVALEEFEFLHL 123
Query: 42 QTPLKD 25
+ L++
Sbjct: 124 EPALQN 129
>UniRef50_Q7R5U0 Cluster: GLP_81_173473_174138; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_81_173473_174138 - Giardia lamblia
ATCC 50803
Length = 221
Score = 41.9 bits (94), Expect = 0.003
Identities = 22/66 (33%), Positives = 37/66 (56%)
Frame = -2
Query: 222 LTPSVCYVETWPAKYDVKVQSINSN*VIVLDTQVNVFLNTEAKITRGGEVVTPQFIFSDF 43
L P++ E K V+V +I+++ +VLD ++NVF + E +++ GGE QF D
Sbjct: 63 LCPALIDAEPGARKDHVEVHTIDTHGRVVLDPEINVFRDAEPEVSSGGEARVGQFKVLDA 122
Query: 42 QTPLKD 25
+ L D
Sbjct: 123 EAALDD 128
>UniRef50_Q9MAT2 Cluster: F13M7.17; n=1; Arabidopsis thaliana|Rep:
F13M7.17 - Arabidopsis thaliana (Mouse-ear cress)
Length = 665
Score = 37.5 bits (83), Expect = 0.072
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Frame = +1
Query: 22 EILERGLKVREYELRR--DNFSATGNFGFGIQEH---IDLGIKYDHSIGIYGLDFYVVLG 186
E+LE+GLK EY + S +G G GI+ H +D GIK D +IG +D Y G
Sbjct: 283 EMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCG 342
>UniRef50_Q4FLN0 Cluster: 50S ribosomal protein L5; n=3;
Bacteria|Rep: 50S ribosomal protein L5 - Pelagibacter
ubique
Length = 184
Score = 35.9 bits (79), Expect = 0.22
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Frame = +1
Query: 1 VRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQEHIDL-GIKYDHSIGIY 159
+RG K E L+R + +++++ L F GN+ FGI+EHI + +D I
Sbjct: 92 LRGNKMYEFLDRLVNIALPRIKDFRGLSPKGFDKFGNYTFGIKEHIIFPEVNFDRIDKIR 151
Query: 160 GLDFYVVLGRPGFNVAHRRRKTGKVGFP 243
GLD VV+ N H K+ FP
Sbjct: 152 GLDIVVVIS--ALNKDHSFALLEKLNFP 177
>UniRef50_Q9CMP7 Cluster: Uncharacterized protein PM0768 precursor;
n=1; Pasteurella multocida|Rep: Uncharacterized protein
PM0768 precursor - Pasteurella multocida
Length = 203
Score = 33.5 bits (73), Expect = 1.2
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +1
Query: 43 KVREYELRRDNFSATGNFGFGIQ-EHI-DLGIKYDHSIGIYGLDFYVVLGR 189
K+ E R++ F FG+ HI D+G+ Y H +G D YV+ GR
Sbjct: 43 KIVENARIRNDLPCLSGFKFGLSLRHIEDMGVSYTHLSRNFGTDLYVIEGR 93
>UniRef50_A6D0I6 Cluster: Putative uncharacterized protein; n=1;
Vibrio shilonii AK1|Rep: Putative uncharacterized
protein - Vibrio shilonii AK1
Length = 353
Score = 33.1 bits (72), Expect = 1.6
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +1
Query: 58 ELRRDNFSATGNFGFGIQEHIDLGIKYDHSIG--IYGLDFYVVLGRPGFNVAHRRRKTGK 231
E ++D + T + F +++ D+ +YD IG ++G+ G PG +AH R +
Sbjct: 236 EFKKDFPNETLRYSFDAKDYRDIFSEYDLMIGYRVHGIGMCASQGTPGIMIAHDPRASTV 295
Query: 232 VGF 240
GF
Sbjct: 296 KGF 298
>UniRef50_A0RPV7 Cluster: Wbgx protein; n=3; Campylobacter|Rep: Wbgx
protein - Campylobacter fetus subsp. fetus (strain
82-40)
Length = 377
Score = 32.7 bits (71), Expect = 2.1
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +1
Query: 19 EEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYD 141
+E+ +R +R + + D+F GN G+ + + +D+G KYD
Sbjct: 199 DEMAKRARLIRNHAIVNDSFDKDGNLGY-VYDVVDIGQKYD 238
>UniRef50_A7P1Q7 Cluster: Chromosome chr19 scaffold_4, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr19 scaffold_4, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 188
Score = 32.3 bits (70), Expect = 2.7
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +1
Query: 1 VRGAKAEEILERGLKVREYEL 63
V+G KA +LE GLKV+EYEL
Sbjct: 124 VKGEKAMRLLESGLKVKEYEL 144
>UniRef50_Q30TV2 Cluster: 50S ribosomal protein L5; n=2;
Epsilonproteobacteria|Rep: 50S ribosomal protein L5 -
Thiomicrospira denitrificans (strain ATCC 33889 / DSM
1351)
Length = 181
Score = 32.3 bits (70), Expect = 2.7
Identities = 15/48 (31%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = +1
Query: 43 KVREYE-LRRDNFSATGNFGFGIQEHIDL-GIKYDHSIGIYGLDFYVV 180
+V+++ + R+ F GN+ FG+QE + + YD + I+G++ VV
Sbjct: 109 RVKDFRGVPRNGFDGRGNYNFGLQEQLIFPEVSYDSVMQIHGMNITVV 156
>UniRef50_Q5L5G9 Cluster: Putative transmembrane protein; n=2;
Chlamydophila|Rep: Putative transmembrane protein -
Chlamydophila abortus
Length = 560
Score = 31.9 bits (69), Expect = 3.6
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = -3
Query: 323 LLCFAIKYDTIIFLLEPLHSIFLVRRWGNPTFPVLR 216
L FA +IFL+ L ++ VRR+GNP FP+LR
Sbjct: 373 LRIFAHGLTPLIFLITVLDNLNCVRRYGNP-FPILR 407
>UniRef50_A0UYZ7 Cluster: FolC bifunctional protein; n=1;
Clostridium cellulolyticum H10|Rep: FolC bifunctional
protein - Clostridium cellulolyticum H10
Length = 424
Score = 31.9 bits (69), Expect = 3.6
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 13/93 (13%)
Frame = +1
Query: 13 KAEEILERGLKVREYELRRDNFSATGNFGFGIQE---------HIDLGIKYDHSI--GIY 159
+AEE++ER K + ++ + +FS + GF + E +I +G+ DH +
Sbjct: 203 EAEEVIERVSKEKNAQIHKVDFSTIYDKGFSLSEQIFDYKDYRNIKIGLLGDHQMRNAAV 262
Query: 160 GLDFYVVLGRPGFNVAHRRRKTG--KVGFPHRL 252
+D +L GF + HR G K +P RL
Sbjct: 263 AIDTCELLCNKGFALTHRNILDGLEKTRWPGRL 295
>UniRef50_Q9LQE5 Cluster: F15O4.40; n=2; Arabidopsis thaliana|Rep:
F15O4.40 - Arabidopsis thaliana (Mouse-ear cress)
Length = 1587
Score = 31.9 bits (69), Expect = 3.6
Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = -2
Query: 276 TTS*HLPCEAVGKSHF--SCLTPSVCYVETWPAKYDVKVQSINSN*VIVLDTQVNVFLNT 103
T + H+ + GK H +C+ E+W V + +++D V VF++
Sbjct: 1243 TEADHIRSRSRGKKHIRGNCVIVKWKSAESWFTLSSVAFALVTKKKKMIMDDDVQVFIDE 1302
Query: 102 EAKITRGGEV 73
EA+++ G E+
Sbjct: 1303 EAEVSSGAEM 1312
>UniRef50_Q9SA01 Cluster: Putative F-box protein At1g31075; n=1;
Arabidopsis thaliana|Rep: Putative F-box protein
At1g31075 - Arabidopsis thaliana (Mouse-ear cress)
Length = 193
Score = 31.9 bits (69), Expect = 3.6
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = -3
Query: 329 YILLCFAIKYDTIIFLLEPLHSIFLVRRWGNPTFPVLRLL 210
Y+++ F ++Y+ F+ + HS L+ GNP +P L ++
Sbjct: 147 YMIVSFDVRYEKFRFINKKCHSYELINYKGNPIWPCLYII 186
>UniRef50_O73804 Cluster: Putative uncharacterized protein; n=2;
Takifugu rubripes|Rep: Putative uncharacterized protein
- Fugu rubripes (Japanese pufferfish) (Takifugu
rubripes)
Length = 497
Score = 31.5 bits (68), Expect = 4.8
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +1
Query: 19 EEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDHSIGIYGLDFY 174
E L RG++VR+ L +FS G+ G +Q + L + +G Y F+
Sbjct: 342 EAALPRGMEVRDPHLGMASFSMFGSLGAAVQVLLILYLMVSSVVGFYSSPFF 393
>UniRef50_Q74GJ5 Cluster: Putative uncharacterized protein; n=1;
Geobacter sulfurreducens|Rep: Putative uncharacterized
protein - Geobacter sulfurreducens
Length = 101
Score = 31.5 bits (68), Expect = 4.8
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1
Query: 196 NLAGQVRRKSPVHKFQLSDRT*YPSQCVLEYRSQNYPWR 80
NL + R + +++LS PSQC + R Q Y WR
Sbjct: 30 NLVAETRVEEDCPEYRLSRDLESPSQCAIRGRRQGYTWR 68
>UniRef50_A0X5X1 Cluster: Flp pilus assembly protein ATPase
CpaE-like; n=1; Shewanella pealeana ATCC 700345|Rep: Flp
pilus assembly protein ATPase CpaE-like - Shewanella
pealeana ATCC 700345
Length = 408
Score = 31.5 bits (68), Expect = 4.8
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = +2
Query: 80 PPRVILASVFKNTLTWVSSTITQLEFMDWTFTSYLAGQVS 199
P + ++AS TLTW++ ++ Q E + W ++Y Q++
Sbjct: 25 PVQAVVASNGSRTLTWLTESLNQFENLKWQSSTYEDDQLA 64
>UniRef50_Q42196 Cluster: 60S ribosomal protein L11; n=1;
Arabidopsis thaliana|Rep: 60S ribosomal protein L11 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 64
Score = 31.1 bits (67), Expect = 6.3
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3
Query: 255 KEDAMKWFQQKYDG 296
K+DAMKWFQ KY+G
Sbjct: 33 KDDAMKWFQVKYEG 46
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 350,544,127
Number of Sequences: 1657284
Number of extensions: 6851941
Number of successful extensions: 17562
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 17270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17547
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 12794443530
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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