Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10732X
(497 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38156| Best HMM Match : Asparaginase_2 (HMM E-Value=1.5e-32) 71 4e-13
SB_13565| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 3e-09
SB_35229| Best HMM Match : Asparaginase_2 (HMM E-Value=3.2e-05) 55 3e-08
SB_47001| Best HMM Match : Asparaginase_2 (HMM E-Value=2.5e-40) 55 4e-08
SB_33572| Best HMM Match : Asparaginase_2 (HMM E-Value=0) 51 5e-07
SB_45081| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.019
SB_1777| Best HMM Match : Asparaginase_2 (HMM E-Value=1e-13) 34 0.075
SB_11873| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.099
SB_23967| Best HMM Match : SRCR (HMM E-Value=5.4e-11) 30 0.92
SB_38159| Best HMM Match : Peptidase_M28 (HMM E-Value=4.7e-09) 29 1.6
SB_42986| Best HMM Match : Glycos_transf_4 (HMM E-Value=1.5) 29 1.6
SB_19477| Best HMM Match : GST_C (HMM E-Value=0.64) 29 2.1
SB_47673| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.7
SB_20452| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.7
SB_31500| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_42068| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_17951| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_45810| Best HMM Match : Na_Ca_ex (HMM E-Value=0) 27 6.5
SB_27757| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5
SB_38258| Best HMM Match : Sec7 (HMM E-Value=5.1e-22) 27 8.6
SB_27566| Best HMM Match : 7tm_1 (HMM E-Value=0.00016) 27 8.6
SB_20844| Best HMM Match : Ion_trans (HMM E-Value=0) 27 8.6
SB_11824| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_1629| Best HMM Match : C2 (HMM E-Value=7.3e-17) 27 8.6
>SB_38156| Best HMM Match : Asparaginase_2 (HMM E-Value=1.5e-32)
Length = 373
Score = 71.3 bits (167), Expect = 4e-13
Identities = 29/46 (63%), Positives = 38/46 (82%)
Frame = +1
Query: 112 TNSTVKAWEVLNNGGTALDAVEQGASVCEDQQCDGTVGYGGSPDEN 249
T+ V W+V+++G +ALDAVE G SVCE +QCDGTVGYGGSP+E+
Sbjct: 71 TSGAVSTWKVISSGSSALDAVEVGCSVCEVEQCDGTVGYGGSPNED 116
Score = 64.5 bits (150), Expect = 5e-11
Identities = 29/46 (63%), Positives = 39/46 (84%)
Frame = +3
Query: 255 TTLDALIMNGRTMSIGAVGGLRRIKHAISVARHVLDHTKHSFLVGE 392
TTLDA+IM+G T +GAVG L+R+K+AI VAR V++H+K +FLVGE
Sbjct: 119 TTLDAMIMDGITHDVGAVGCLKRVKNAIGVARSVMEHSKETFLVGE 164
>SB_13565| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 597
Score = 58.4 bits (135), Expect = 3e-09
Identities = 26/63 (41%), Positives = 39/63 (61%)
Frame = +3
Query: 234 KSGRKWRTTLDALIMNGRTMSIGAVGGLRRIKHAISVARHVLDHTKHSFLVGELATQFAV 413
K + +DA+IM+GR +++G VGG+ + + ISVAR V+ + H L+GE A FA
Sbjct: 267 KLNNRGEVEMDAMIMDGRDLNVGGVGGISGVSNPISVARKVMTESNHCLLIGEGANMFAD 326
Query: 414 EMG 422
E G
Sbjct: 327 EQG 329
>SB_35229| Best HMM Match : Asparaginase_2 (HMM E-Value=3.2e-05)
Length = 477
Score = 55.2 bits (127), Expect = 3e-08
Identities = 26/73 (35%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Frame = +3
Query: 252 RTTLDALIMNGRTMSIGAVGGLRRIKHAISVARHVLDHTKHSFLVGELATQFAVEMG--- 422
R ++DA++M+GR++ G V GLR + + I+VA+ ++ +++H L GE FA EMG
Sbjct: 313 RVSMDAMMMDGRSIDYGGVCGLRNVANPITVAKKLMTNSRHCLLTGEGGDMFAQEMGVPF 372
Query: 423 FQEESITTSVSEK 461
+E++ T + K
Sbjct: 373 VSDENLITEMRRK 385
>SB_47001| Best HMM Match : Asparaginase_2 (HMM E-Value=2.5e-40)
Length = 423
Score = 54.8 bits (126), Expect = 4e-08
Identities = 26/73 (35%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Frame = +3
Query: 252 RTTLDALIMNGRTMSIGAVGGLRRIKHAISVARHVLDHTKHSFLVGELATQFAVEMG--- 422
R ++DA++M+GR++ G V GLR + + I+VA+ ++ +++H L GE FA EMG
Sbjct: 128 RVSMDAMMMDGRSIDYGGVCGLRNVANPITVAKKLMTNSRHCLLTGEGGDMFAREMGVPF 187
Query: 423 FQEESITTSVSEK 461
+E++ T + K
Sbjct: 188 VSDENLITEMRRK 200
>SB_33572| Best HMM Match : Asparaginase_2 (HMM E-Value=0)
Length = 427
Score = 51.2 bits (117), Expect = 5e-07
Identities = 23/54 (42%), Positives = 37/54 (68%)
Frame = +3
Query: 261 LDALIMNGRTMSIGAVGGLRRIKHAISVARHVLDHTKHSFLVGELATQFAVEMG 422
+DA+IM+G T+ GAV ++ + + +S+ARHV+ T H LV E A +FA ++G
Sbjct: 126 MDAMIMDGCTLDTGAVACVKGVVNPVSLARHVMTDTPHCMLVSEGAIKFAQDLG 179
>SB_45081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 126
Score = 35.9 bits (79), Expect = 0.019
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = +1
Query: 88 IVITTWSXTNSTVKAW-EVLNNGGTALDAVEQGASVCEDQQCDG--TVGYGGSPD 243
+V+ TW+ +N V+ + L G +LDA+E+G + ED G VG GG P+
Sbjct: 45 VVVGTWAFSNQAVRVIADELLKGRNSLDALEKGINDVEDDPLTGRYVVGRGGYPN 99
>SB_1777| Best HMM Match : Asparaginase_2 (HMM E-Value=1e-13)
Length = 250
Score = 33.9 bits (74), Expect = 0.075
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Frame = +3
Query: 303 AVGGLRRIKHAISVARHVLDHTKHSFLVGELATQFAVEMGF---QEESITTSVS 455
AV ++ + + +S+ARHV+ T H LV E A +FA ++ + +S+T+ S
Sbjct: 2 AVACVKGVVNPVSLARHVMTDTPHCMLVSEGAVKFAQDLDLPMVEPQSMTSEFS 55
>SB_11873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 33.5 bits (73), Expect = 0.099
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = +3
Query: 339 SVARHVLDHTKHSFLVGELATQFAVEMGFQ---EESITTSVSEKLWMK 473
SVAR VL+ + HS LVG A FA + G + EES+ T S+ + K
Sbjct: 7 SVARLVLERSPHSMLVGSGAHTFAEQNGVKIESEESLQTQESKDAYKK 54
>SB_23967| Best HMM Match : SRCR (HMM E-Value=5.4e-11)
Length = 3369
Score = 30.3 bits (65), Expect = 0.92
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +2
Query: 302 SCGWLEKDQTCHICC*TCIGPHKTFLFSW*A--CHPICSRNGLSRRIHHYLCIRK 460
+CGW + Q C T PH+ W C+ + S N SR+I H C RK
Sbjct: 2333 NCGWCDSAQQCMPGNQT--RPHQEPCPDWFYHNCYTVGSENHCSRKIQHVDCTRK 2385
>SB_38159| Best HMM Match : Peptidase_M28 (HMM E-Value=4.7e-09)
Length = 1049
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 5/39 (12%)
Frame = +1
Query: 133 WEVLNNGGTALDAVEQGASVCEDQQC-----DGTVGYGG 234
+E L GG+A+D + G + CE + C + VG+GG
Sbjct: 1010 FETLMKGGSAVDGIVSGITACELKPCANNPLNPNVGFGG 1048
>SB_42986| Best HMM Match : Glycos_transf_4 (HMM E-Value=1.5)
Length = 279
Score = 29.5 bits (63), Expect = 1.6
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -1
Query: 257 SSPFSSGLPPYPTVPSHCWSSQTDAPCSTASNAVPP 150
SS S LPP P++ S SS + P S++S ++PP
Sbjct: 88 SSSSSQSLPPPPSLSSQT-SSSSPPPSSSSSQSLPP 122
>SB_19477| Best HMM Match : GST_C (HMM E-Value=0.64)
Length = 1294
Score = 29.1 bits (62), Expect = 2.1
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = -2
Query: 295 LIVLPFIIRASNVVLHFRPDFHHILQYHHIVGL 197
+I++ FII V++H+ D HH++ + I+ L
Sbjct: 492 IIIIIFIIAIIIVIMHYHADHHHLVIHRVIIFL 524
>SB_47673| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1480
Score = 28.3 bits (60), Expect = 3.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -1
Query: 392 LTN*KGMFCVVQYMSSNRYGMFDPSQATHSSNTHS 288
+TN CV + +S N G+F + T SSN +S
Sbjct: 1164 ITNASDQVCVNEVLSPNEAGVFSDHELTMSSNENS 1198
>SB_20452| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 28.3 bits (60), Expect = 3.7
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +3
Query: 222 RIWWKSGRKWRTTLDALIMNGRTMSIGAVGGLRR 323
R W + +KWR ++D + + ++ S A+ L R
Sbjct: 912 RAWQRRSKKWRRSVDEIFTDSKSDSTSAISELGR 945
>SB_31500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1446
Score = 27.9 bits (59), Expect = 4.9
Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 6/58 (10%)
Frame = -1
Query: 320 SQATHSSNT------HSSPIHNKSI*CSSPFSSGLPPYPTVPSHCWSSQTDAPCSTAS 165
SQATH+ H S H+ S SSP + PY T + SSQ P S+ S
Sbjct: 1013 SQATHTPPPRAVDLPHPSSPHSSSALYSSPSRTSNLPYTTYTNTAISSQPSPPYSSTS 1070
>SB_42068| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3367
Score = 27.9 bits (59), Expect = 4.9
Identities = 19/50 (38%), Positives = 23/50 (46%)
Frame = -2
Query: 343 TDMACLILLKPPTAPILIVLPFIIRASNVVLHFRPDFHHILQYHHIVGLH 194
TDMA + KP P +IV + N VL RP H + H I LH
Sbjct: 870 TDMASMAAHKPGGDPEIIVSIHEVCIQNQVLFMRPPVEHARE-HLINELH 918
>SB_17951| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 27.9 bits (59), Expect = 4.9
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
Frame = -1
Query: 242 SGLPPYPTVPS----HCWSSQTDAPCSTASNAVPPLFRTS 135
S L P PTV + H W S+ P S A A+ LF++S
Sbjct: 145 SALEPQPTVVTPVSPHTWGSRRSWPPSLALRALQALFKSS 184
>SB_45810| Best HMM Match : Na_Ca_ex (HMM E-Value=0)
Length = 582
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 260 CSSPFSSGLPPYPTVPSHCWSS 195
C P S P YPT CWSS
Sbjct: 352 CLPPVSIETPEYPTEERTCWSS 373
>SB_27757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 344
Score = 27.5 bits (58), Expect = 6.5
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = +3
Query: 252 RTTLDALIMNGRTMSIGAV--GGLRRIKHAISVARHVLDHTKHSFLVGELATQFAVEMGF 425
RTT I+NGRT+S G GG+ R AI++ +H L T +G A V+ F
Sbjct: 230 RTTNHGTIINGRTISNGTKPHGGVCR--QAINM-KH-LSLTDFKIKIGRSARSGPVKKAF 285
Query: 426 QEESITTSVSEKLWMK 473
+ + + W +
Sbjct: 286 EAAQVQDKWEQTAWAR 301
>SB_38258| Best HMM Match : Sec7 (HMM E-Value=5.1e-22)
Length = 237
Score = 27.1 bits (57), Expect = 8.6
Identities = 17/72 (23%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = -2
Query: 379 KECFVWS-NTCLATDMACLILLKPPTAPILIVLPFIIRASNVVLHFRPDFHHILQYHHIV 203
++ + W C T + +I++ I+I++ II + H HH+L +HH
Sbjct: 126 RDTYEWKVMPCDYTIIIIIIIITIIIIIIIIIIIIIITIVIAIHHHHYYHHHLLHHHHHH 185
Query: 202 GLHRPMLPALRH 167
H ++ +RH
Sbjct: 186 WHHHHLI--IRH 195
>SB_27566| Best HMM Match : 7tm_1 (HMM E-Value=0.00016)
Length = 628
Score = 27.1 bits (57), Expect = 8.6
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = -2
Query: 349 LATDMACLILLKPPTAPILIVLPFIIRASNVVLHFRPDFHHILQYHHIVG 200
+ T CL +L I ++ P+++ V L P F + + Y+++VG
Sbjct: 401 MTTKKVCLTILGMWLVTIALITPWLLNLYKVNLGDAPTFIYRMIYYYMVG 450
>SB_20844| Best HMM Match : Ion_trans (HMM E-Value=0)
Length = 2675
Score = 27.1 bits (57), Expect = 8.6
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +2
Query: 305 CGWLEKDQTCHICC*TCIGPHKTFLFSW*ACHPICSRNGLSRRIH 439
C + K QT C + P + F+ W AC C + RR+H
Sbjct: 262 CDYKSKPQTRRQCNDSPCPP-RWFISGWSACSSTCGQGKQVRRVH 305
>SB_11824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 125
Score = 27.1 bits (57), Expect = 8.6
Identities = 18/68 (26%), Positives = 27/68 (39%)
Frame = -2
Query: 412 TANWVASSPTKKECFVWSNTCLATDMACLILLKPPTAPILIVLPFIIRASNVVLHFRPDF 233
+ NW PT C ++ N L LI P++ P I S +L+
Sbjct: 37 STNW---GPTVT-CVIFENRSLDVCYRVLIRALEQALPLVNRNPLSINISERILNVHQHH 92
Query: 232 HHILQYHH 209
HH ++HH
Sbjct: 93 HHRRRHHH 100
>SB_1629| Best HMM Match : C2 (HMM E-Value=7.3e-17)
Length = 327
Score = 27.1 bits (57), Expect = 8.6
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = -1
Query: 341 RYGMFDPSQATHSSNTHSSPIHNKSI*CSSPFSSGLPPYPTVPSHCWSSQTDAPCSTASN 162
R+ ++ +++T++SP+ +K FS G PY T P D S +
Sbjct: 70 RFVQHSSKNSSETTSTNTSPVDDKHF-----FSEGSDPYRTAPDDMNGPDRDRTGSIKAL 124
Query: 161 AVPPLFRTS 135
VP R+S
Sbjct: 125 QVPAPRRSS 133
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,605,337
Number of Sequences: 59808
Number of extensions: 320686
Number of successful extensions: 1039
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1029
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1075029208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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