Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10732X
(497 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50198-2|AAA91260.2| 363|Caenorhabditis elegans Hypothetical pr... 73 9e-14
Z92803-13|CAB07249.2| 331|Caenorhabditis elegans Hypothetical p... 30 0.81
AL021482-4|CAA16341.2| 331|Caenorhabditis elegans Hypothetical ... 30 0.81
AL031630-11|CAA21001.1| 334|Caenorhabditis elegans Hypothetical... 29 1.4
Z93779-1|CAB07849.2| 2103|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z78543-7|CAB01757.2| 2103|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z66566-5|CAA91487.2| 2103|Caenorhabditis elegans Hypothetical pr... 29 2.5
U23452-1|AAK31545.2| 284|Caenorhabditis elegans Hypothetical pr... 29 2.5
AL110484-28|CAB54395.2| 419|Caenorhabditis elegans Hypothetical... 29 2.5
Z99281-48|CAE18025.2| 661|Caenorhabditis elegans Hypothetical p... 28 3.3
U58754-8|AAK72082.1| 325|Caenorhabditis elegans Serpentine rece... 28 3.3
U39997-6|AAN60517.1| 942|Caenorhabditis elegans Clear protein 1... 28 3.3
U39997-5|AAN60515.1| 1409|Caenorhabditis elegans Clear protein 1... 28 3.3
U39997-4|AAN60516.1| 1444|Caenorhabditis elegans Clear protein 1... 28 3.3
AF047881-1|AAC27552.1| 942|Caenorhabditis elegans truncated CLR... 28 3.3
AF047880-1|AAC27551.1| 1409|Caenorhabditis elegans CLR-1 protein. 28 3.3
AC024809-9|AAO12399.1| 700|Caenorhabditis elegans Hypothetical ... 28 3.3
AC024809-8|AAF59546.2| 741|Caenorhabditis elegans Hypothetical ... 28 3.3
U80031-3|AAB37613.1| 524|Caenorhabditis elegans Hypothetical pr... 28 4.3
AF026205-1|ABD63216.1| 126|Caenorhabditis elegans Hypothetical ... 28 4.3
Z48809-2|CAA88747.1| 406|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z50875-2|CAA90777.1| 1322|Caenorhabditis elegans Hypothetical pr... 27 10.0
Z50874-13|CAA90775.1| 1322|Caenorhabditis elegans Hypothetical p... 27 10.0
AF040649-5|AAK72086.3| 327|Caenorhabditis elegans Serpentine re... 27 10.0
AF016664-3|AAB66069.2| 315|Caenorhabditis elegans Serpentine re... 27 10.0
>U50198-2|AAA91260.2| 363|Caenorhabditis elegans Hypothetical
protein R04B3.2 protein.
Length = 363
Score = 73.3 bits (172), Expect = 9e-14
Identities = 37/81 (45%), Positives = 52/81 (64%)
Frame = +3
Query: 255 TTLDALIMNGRTMSIGAVGGLRRIKHAISVARHVLDHTKHSFLVGELATQFAVEMGFQEE 434
T LD+L+++ M +GAV L RI+ A VA V++ TKH+ LVGE ATQFA +GF+EE
Sbjct: 83 TCLDSLVIDADGMRVGAVANLHRIRDAARVAWGVMNFTKHTLLVGESATQFAKTLGFKEE 142
Query: 435 SITTSVSEKLWMKWHNEHHCQ 497
++T ++ KW E CQ
Sbjct: 143 DLSTEETKSWISKWKTE-KCQ 162
Score = 56.4 bits (130), Expect = 1e-08
Identities = 34/82 (41%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Frame = +1
Query: 13 MNQIGIFLTYVLVYLTNVC*ETNIHIVITTWSXTN---STVKAWEVLNNGGTALDAVEQG 183
M + IFL ++ Y+ + ++ +VITTW +T A + GG VE G
Sbjct: 1 MRRFYIFLL-LIPYINGTINDDSLPMVITTWGSDGFKKATKNAVDATLLGGRMFGLVE-G 58
Query: 184 ASVCEDQQCDGTVGYGGSPDEN 249
S CE QCD TVGYGGSPDEN
Sbjct: 59 LSTCEALQCDTTVGYGGSPDEN 80
>Z92803-13|CAB07249.2| 331|Caenorhabditis elegans Hypothetical
protein K01G5.9 protein.
Length = 331
Score = 30.3 bits (65), Expect = 0.81
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 13/89 (14%)
Frame = +3
Query: 264 DALIMNGRTMSIGAVGGLRRIKHAISVARHVLDHTK--------HS-FLVGELATQFAVE 416
+A M+ + +S GAVG + + H VARH L H+ H LVG A ++AV+
Sbjct: 64 EASYMSSKNLSFGAVGAISNVFHPSRVARH-LAHSNWWKQRRLLHPLILVGRGAEKYAVK 122
Query: 417 MGF----QEESITTSVSEKLWMKWHNEHH 491
F EE ++ + E H H
Sbjct: 123 NDFPTCTPEELVSKAAKESFEKYLHRMLH 151
>AL021482-4|CAA16341.2| 331|Caenorhabditis elegans Hypothetical
protein K01G5.9 protein.
Length = 331
Score = 30.3 bits (65), Expect = 0.81
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 13/89 (14%)
Frame = +3
Query: 264 DALIMNGRTMSIGAVGGLRRIKHAISVARHVLDHTK--------HS-FLVGELATQFAVE 416
+A M+ + +S GAVG + + H VARH L H+ H LVG A ++AV+
Sbjct: 64 EASYMSSKNLSFGAVGAISNVFHPSRVARH-LAHSNWWKQRRLLHPLILVGRGAEKYAVK 122
Query: 417 MGF----QEESITTSVSEKLWMKWHNEHH 491
F EE ++ + E H H
Sbjct: 123 NDFPTCTPEELVSKAAKESFEKYLHRMLH 151
>AL031630-11|CAA21001.1| 334|Caenorhabditis elegans Hypothetical
protein Y38H6C.12 protein.
Length = 334
Score = 29.5 bits (63), Expect = 1.4
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +3
Query: 12 NEPNRNIFNLCISLFNECLLRNKYSHSDYYLVV 110
N P++N+ L I N C+ K +H D++L++
Sbjct: 158 NIPDQNLGKLMIMETNPCIPEEKINHPDFFLLI 190
>Z93779-1|CAB07849.2| 2103|Caenorhabditis elegans Hypothetical
protein T25C12.3 protein.
Length = 2103
Score = 28.7 bits (61), Expect = 2.5
Identities = 14/47 (29%), Positives = 20/47 (42%)
Frame = -1
Query: 248 FSSGLPPYPTVPSHCWSSQTDAPCSTASNAVPPLFRTSQALTVEFVN 108
F SG P P P+ C + P + A+ PP F ++ VN
Sbjct: 778 FCSGTPTTPYPPNSCQNGGVTDPTNNATCICPPGFYGQYCTNIQCVN 824
>Z78543-7|CAB01757.2| 2103|Caenorhabditis elegans Hypothetical
protein T25C12.3 protein.
Length = 2103
Score = 28.7 bits (61), Expect = 2.5
Identities = 14/47 (29%), Positives = 20/47 (42%)
Frame = -1
Query: 248 FSSGLPPYPTVPSHCWSSQTDAPCSTASNAVPPLFRTSQALTVEFVN 108
F SG P P P+ C + P + A+ PP F ++ VN
Sbjct: 778 FCSGTPTTPYPPNSCQNGGVTDPTNNATCICPPGFYGQYCTNIQCVN 824
>Z66566-5|CAA91487.2| 2103|Caenorhabditis elegans Hypothetical
protein T25C12.3 protein.
Length = 2103
Score = 28.7 bits (61), Expect = 2.5
Identities = 14/47 (29%), Positives = 20/47 (42%)
Frame = -1
Query: 248 FSSGLPPYPTVPSHCWSSQTDAPCSTASNAVPPLFRTSQALTVEFVN 108
F SG P P P+ C + P + A+ PP F ++ VN
Sbjct: 778 FCSGTPTTPYPPNSCQNGGVTDPTNNATCICPPGFYGQYCTNIQCVN 824
>U23452-1|AAK31545.2| 284|Caenorhabditis elegans Hypothetical
protein R07G3.5 protein.
Length = 284
Score = 28.7 bits (61), Expect = 2.5
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -1
Query: 317 QATHSSNTHSSPIHNKSI*CSSPFSSGLPPYPTVPSH 207
+AT ++N + + SSPF PPYP VP H
Sbjct: 146 RATETANIILKHLPDDLTRTSSPFIEEGPPYPPVPDH 182
>AL110484-28|CAB54395.2| 419|Caenorhabditis elegans Hypothetical
protein Y38E10A.4 protein.
Length = 419
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -1
Query: 233 PPYPTVPSHCWSSQTDAPCSTASNAVP 153
PP P +PS C SS AP + +S A P
Sbjct: 294 PPTPVIPSMCNSSMIMAPGTISSPAYP 320
>Z99281-48|CAE18025.2| 661|Caenorhabditis elegans Hypothetical
protein Y57G11C.42 protein.
Length = 661
Score = 28.3 bits (60), Expect = 3.3
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -1
Query: 323 PSQATHSSNTHSSPIHNKSI*CSSPFSSGLPPYPTVPSHCWSSQTDAPCS-TASNAVPPL 147
P AT +SN+ + I + ++P +G P S W++ T P + AS+AVP +
Sbjct: 103 PGAATWNSNSGDARIGAQKA-TTTPAPTGFPTLIPFSSEPWTTGTQTPLAPAASSAVPEI 161
>U58754-8|AAK72082.1| 325|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 13 protein.
Length = 325
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -2
Query: 367 VWSNTCLATDMACLILLKP-PTAPILIVLPFII 272
+WS L+ C IL KP PT P+L+++ F+I
Sbjct: 104 LWS-LLLSFSYRCYILYKPAPTRPVLVLIIFLI 135
>U39997-6|AAN60517.1| 942|Caenorhabditis elegans Clear protein 1,
isoform c protein.
Length = 942
Score = 28.3 bits (60), Expect = 3.3
Identities = 11/19 (57%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = +2
Query: 398 HPICSRNGLSRRIHH-YLC 451
HP RNGL+RR+H Y C
Sbjct: 219 HPFAPRNGLARRVHEKYSC 237
>U39997-5|AAN60515.1| 1409|Caenorhabditis elegans Clear protein 1,
isoform a protein.
Length = 1409
Score = 28.3 bits (60), Expect = 3.3
Identities = 11/19 (57%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = +2
Query: 398 HPICSRNGLSRRIHH-YLC 451
HP RNGL+RR+H Y C
Sbjct: 219 HPFAPRNGLARRVHEKYSC 237
>U39997-4|AAN60516.1| 1444|Caenorhabditis elegans Clear protein 1,
isoform b protein.
Length = 1444
Score = 28.3 bits (60), Expect = 3.3
Identities = 11/19 (57%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = +2
Query: 398 HPICSRNGLSRRIHH-YLC 451
HP RNGL+RR+H Y C
Sbjct: 219 HPFAPRNGLARRVHEKYSC 237
>AF047881-1|AAC27552.1| 942|Caenorhabditis elegans truncated CLR-1
protein.
Length = 942
Score = 28.3 bits (60), Expect = 3.3
Identities = 11/19 (57%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = +2
Query: 398 HPICSRNGLSRRIHH-YLC 451
HP RNGL+RR+H Y C
Sbjct: 219 HPFAPRNGLARRVHEKYSC 237
>AF047880-1|AAC27551.1| 1409|Caenorhabditis elegans CLR-1 protein.
Length = 1409
Score = 28.3 bits (60), Expect = 3.3
Identities = 11/19 (57%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = +2
Query: 398 HPICSRNGLSRRIHH-YLC 451
HP RNGL+RR+H Y C
Sbjct: 219 HPFAPRNGLARRVHEKYSC 237
>AC024809-9|AAO12399.1| 700|Caenorhabditis elegans Hypothetical
protein Y53G8AR.2b protein.
Length = 700
Score = 28.3 bits (60), Expect = 3.3
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +2
Query: 266 CSXXXXXXXXXXSCGWLEKDQTCHICC 346
CS +C W++ ++T H+CC
Sbjct: 353 CSVCDTRQGACVTCSWVDCEETYHVCC 379
>AC024809-8|AAF59546.2| 741|Caenorhabditis elegans Hypothetical
protein Y53G8AR.2a protein.
Length = 741
Score = 28.3 bits (60), Expect = 3.3
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +2
Query: 266 CSXXXXXXXXXXSCGWLEKDQTCHICC 346
CS +C W++ ++T H+CC
Sbjct: 394 CSVCDTRQGACVTCSWVDCEETYHVCC 420
>U80031-3|AAB37613.1| 524|Caenorhabditis elegans Hypothetical
protein B0554.4 protein.
Length = 524
Score = 27.9 bits (59), Expect = 4.3
Identities = 12/46 (26%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 297 IGAVGGLRRIKHAISVARHVLDHTKHSFLVGELAT-QFAVEMGFQE 431
+ VGG RR+ +++ A+ ++ VG+ T QF +++G+ +
Sbjct: 397 VSTVGGTRRVMDSVTCAQSTCSPKSLTYGVGDNQTPQFQIDVGYSD 442
>AF026205-1|ABD63216.1| 126|Caenorhabditis elegans Hypothetical
protein T23E7.5 protein.
Length = 126
Score = 27.9 bits (59), Expect = 4.3
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 28 IFLTYVLVYLTNVC*ETNIHIVITTWSXTNSTVKAW 135
IFL + ++YL N+ N+ V+ T S N K W
Sbjct: 82 IFLPFFMIYLINLFVRHNLFNVVRTKSTVNRHGKPW 117
>Z48809-2|CAA88747.1| 406|Caenorhabditis elegans Hypothetical
protein T01E8.4 protein.
Length = 406
Score = 27.1 bits (57), Expect = 7.6
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +1
Query: 76 TNIHIVITTWSXTNSTVKAWEVLNNGGTA-LDAVEQGASVCEDQQCDG 216
T+ + T+W +STVK+W + +NG L++V G S + C G
Sbjct: 169 TSTNFYTTSW---DSTVKSWHITDNGALQNLNSVNVG-SAAQCISCSG 212
>Z50875-2|CAA90777.1| 1322|Caenorhabditis elegans Hypothetical
protein T08A11.2 protein.
Length = 1322
Score = 26.6 bits (56), Expect = 10.0
Identities = 17/57 (29%), Positives = 23/57 (40%)
Frame = -1
Query: 323 PSQATHSSNTHSSPIHNKSI*CSSPFSSGLPPYPTVPSHCWSSQTDAPCSTASNAVP 153
PS + S +P ++ ++P SGL PSH SQT T A P
Sbjct: 313 PSASKRRSRWDLTPSQTPNVAAATPLHSGLQTPSFTPSH--PSQTPIGAMTPGGATP 367
>Z50874-13|CAA90775.1| 1322|Caenorhabditis elegans Hypothetical
protein T08A11.2 protein.
Length = 1322
Score = 26.6 bits (56), Expect = 10.0
Identities = 17/57 (29%), Positives = 23/57 (40%)
Frame = -1
Query: 323 PSQATHSSNTHSSPIHNKSI*CSSPFSSGLPPYPTVPSHCWSSQTDAPCSTASNAVP 153
PS + S +P ++ ++P SGL PSH SQT T A P
Sbjct: 313 PSASKRRSRWDLTPSQTPNVAAATPLHSGLQTPSFTPSH--PSQTPIGAMTPGGATP 367
>AF040649-5|AAK72086.3| 327|Caenorhabditis elegans Serpentine
receptor, class i protein39 protein.
Length = 327
Score = 26.6 bits (56), Expect = 10.0
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = -2
Query: 382 KKECFVWSNTCLATDMACLILLKP-PTAPIL--IVLPFIIRASNVVLHF 245
+K V+ TC TD+ L++P P PI+ + F+ R +V H+
Sbjct: 44 RKSLLVFQATCTVTDIHFTFLMQPLPLIPIMAGYCVGFLARCFDVWTHY 92
>AF016664-3|AAB66069.2| 315|Caenorhabditis elegans Serpentine
receptor, class i protein38 protein.
Length = 315
Score = 26.6 bits (56), Expect = 10.0
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = -2
Query: 382 KKECFVWSNTCLATDMACLILLKP-PTAPIL--IVLPFIIRASNVVLHF 245
+K V+ TC TD+ L++P P PI+ + F+ R +V H+
Sbjct: 44 RKSLLVFQATCTVTDIHFTFLMQPLPLIPIMAGYCVGFLARCFDVWTHY 92
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,744,324
Number of Sequences: 27780
Number of extensions: 247247
Number of successful extensions: 726
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 726
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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