Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10732X
(497 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 24 0.77
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 24 1.0
L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein. 23 1.8
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 3.1
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 3.1
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 21 5.4
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 21 5.4
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 7.1
DQ435338-1|ABD92653.1| 135|Apis mellifera OBP21 protein. 21 9.4
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 21 9.4
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 9.4
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 24.2 bits (50), Expect = 0.77
Identities = 10/32 (31%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = -1
Query: 260 CSSPFSSG--LPPYPTVPSHCWSSQTDAPCST 171
C +P+++ L P + + CW+ D CST
Sbjct: 139 CGNPWNTRYCLTPTERLEALCWTQDEDVICST 170
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 23.8 bits (49), Expect = 1.0
Identities = 10/32 (31%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = -1
Query: 260 CSSPFSSG--LPPYPTVPSHCWSSQTDAPCST 171
C +P+++ L P + + CW+ D CST
Sbjct: 192 CGNPWNTRYCLTPTERLEALCWTQDEDIICST 223
>L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein.
Length = 382
Score = 23.0 bits (47), Expect = 1.8
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -2
Query: 463 SFSDTEVVMDSS*KPISTANWVASSPTKK 377
SF V+ S +PI NW + P KK
Sbjct: 135 SFPGVGVIDFESWRPIFRQNWASLQPYKK 163
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.2 bits (45), Expect = 3.1
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +3
Query: 282 GRTMSIGAVGGLRRIKHAISVARHVLDHTKHSFLVGELA 398
G +G +GGL A + H + HSF+ E A
Sbjct: 1708 GSLAGLGGLGGLGGAAEASAAGLHPNNTLLHSFMYHEHA 1746
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.2 bits (45), Expect = 3.1
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +3
Query: 282 GRTMSIGAVGGLRRIKHAISVARHVLDHTKHSFLVGELA 398
G +G +GGL A + H + HSF+ E A
Sbjct: 1704 GSLAGLGGLGGLGGAAEASAAGLHPNNTLLHSFMYHEHA 1742
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 21.4 bits (43), Expect = 5.4
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = -2
Query: 91 LCEYLFLNKHSLNKLIHKL 35
+C Y F N L K H L
Sbjct: 165 MCPYFFFNSEVLQKANHAL 183
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 21.4 bits (43), Expect = 5.4
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = -2
Query: 91 LCEYLFLNKHSLNKLIHKL 35
+C Y F N L K H L
Sbjct: 165 MCPYFFFNSEVLQKANHAL 183
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.0 bits (42), Expect = 7.1
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -1
Query: 323 PSQATHSSNTHSSPIHNKSI 264
PSQ TH + ++S I ++I
Sbjct: 796 PSQTTHGYDIYASSIDKENI 815
Score = 20.6 bits (41), Expect = 9.4
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +3
Query: 51 LFNECLLRNKYSHSDYYLVVXKFN 122
L+N L ++ +HS YLV F+
Sbjct: 220 LYNHARLMSQDNHSKEYLVSIMFS 243
>DQ435338-1|ABD92653.1| 135|Apis mellifera OBP21 protein.
Length = 135
Score = 20.6 bits (41), Expect = 9.4
Identities = 7/23 (30%), Positives = 15/23 (65%)
Frame = +3
Query: 27 NIFNLCISLFNECLLRNKYSHSD 95
++ N + LF+ECL++ ++ D
Sbjct: 53 DVENEKVQLFSECLIKKFNAYDD 75
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 20.6 bits (41), Expect = 9.4
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -3
Query: 117 ICXRPSSNHYVNICFLTN 64
I RP SN N C L N
Sbjct: 472 ISTRPKSNTVENACVLKN 489
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 20.6 bits (41), Expect = 9.4
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 254 SPFSSGLPPYPTV 216
SPF +G P PT+
Sbjct: 1172 SPFMAGAPNVPTI 1184
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,690
Number of Sequences: 438
Number of extensions: 3298
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13618701
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -