Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10731
(545 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64; Eukary... 220 2e-56
UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|R... 214 1e-54
UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87; Eukary... 161 7e-39
UniRef50_Q7R487 Cluster: GLP_480_84573_84097; n=1; Giardia lambl... 118 9e-26
UniRef50_Q5AQG2 Cluster: Putative uncharacterized protein; n=1; ... 117 2e-25
UniRef50_Q4Q9A5 Cluster: 40S ribosomal protein S16, putative; n=... 115 8e-25
UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiell... 112 6e-24
UniRef50_Q8SSC2 Cluster: 40S RIBOSOMAL PROTEIN S16; n=1; Encepha... 106 4e-22
UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4; Archaea... 92 9e-18
UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1; ... 91 1e-17
UniRef50_Q9YB48 Cluster: 30S ribosomal protein S9P; n=10; Thermo... 85 8e-16
UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089, ... 80 4e-14
UniRef50_A0RXP4 Cluster: 30S ribosomal protein S9P; n=2; Thermop... 77 3e-13
UniRef50_Q1NYV6 Cluster: 30S ribosomal protein S9; n=1; Candidat... 53 5e-06
UniRef50_UPI0000DA28A7 Cluster: PREDICTED: similar to ribosomal ... 46 4e-04
UniRef50_A6DDR0 Cluster: 30S ribosomal protein S9; n=1; Caminiba... 46 8e-04
UniRef50_Q83AX9 Cluster: 30S ribosomal protein S9; n=101; Bacter... 45 0.001
UniRef50_A3CEI4 Cluster: Putative uncharacterized protein; n=1; ... 44 0.002
UniRef50_Q6F0X3 Cluster: 30S ribosomal protein S9; n=19; Bacteri... 43 0.004
UniRef50_O51313 Cluster: 30S ribosomal protein S9; n=87; cellula... 42 0.009
UniRef50_A6C0N9 Cluster: 30S ribosomal protein S9; n=1; Planctom... 40 0.028
UniRef50_A5WDK8 Cluster: Ribosomal protein S9; n=2; Proteobacter... 40 0.038
UniRef50_Q9X1G4 Cluster: 30S ribosomal protein S9; n=9; Bacteria... 40 0.038
UniRef50_O14006 Cluster: 40S ribosomal protein S9, mitochondrial... 39 0.066
UniRef50_Q8F0T3 Cluster: 30S ribosomal protein S9; n=8; Bacteria... 38 0.11
UniRef50_A6KZT0 Cluster: Putative outer membrane protein, probab... 36 0.46
UniRef50_Q8FS19 Cluster: 30S ribosomal protein S9; n=32; Bacteri... 36 0.46
UniRef50_Q9PKR2 Cluster: 30S ribosomal protein S9; n=3; Chlamydi... 36 0.46
UniRef50_A1SL17 Cluster: Glycosyl transferase, group 1; n=1; Noc... 34 1.9
UniRef50_Q8SXF0 Cluster: RH44312p; n=5; Diptera|Rep: RH44312p - ... 34 1.9
UniRef50_Q00VS8 Cluster: Chromosome 14 contig 1, DNA sequence; n... 33 3.3
UniRef50_A5K195 Cluster: 30S ribosomal protein S9, putative; n=5... 33 3.3
UniRef50_Q28VM5 Cluster: Negative transcriptional regulator; n=2... 33 4.3
UniRef50_A6LJZ1 Cluster: Nicotinate (Nicotinamide) nucleotide ad... 33 4.3
UniRef50_Q4TB52 Cluster: Chromosome 13 SCAF7203, whole genome sh... 33 5.7
UniRef50_P82933 Cluster: 28S ribosomal protein S9, mitochondrial... 33 5.7
UniRef50_P47656 Cluster: 30S ribosomal protein S9; n=5; Firmicut... 33 5.7
UniRef50_A2Y5Y5 Cluster: Putative uncharacterized protein; n=3; ... 32 7.5
UniRef50_Q86I67 Cluster: Putative uncharacterized protein; n=2; ... 32 7.5
UniRef50_A0DDZ1 Cluster: Chromosome undetermined scaffold_47, wh... 32 7.5
UniRef50_O94150 Cluster: 40S ribosomal protein S9, mitochondrial... 32 7.5
UniRef50_Q08PN8 Cluster: Polyketide synthase; n=1; Stigmatella a... 32 9.9
UniRef50_A0L8Q2 Cluster: (NiFe) hydrogenase maturation protein H... 32 9.9
UniRef50_A7PLL5 Cluster: Chromosome chr7 scaffold_20, whole geno... 32 9.9
>UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64;
Eukaryota|Rep: 40S ribosomal protein S16 - Homo sapiens
(Human)
Length = 146
Score = 220 bits (537), Expect = 2e-56
Identities = 102/141 (72%), Positives = 123/141 (87%)
Frame = +2
Query: 11 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEHRLLQYKLQEPILLLGKEKFSM 190
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++E R LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 191 VDIRVTSQGWWSCSTSLRYQTTISKALIAFYQKYVDEASKKEITDILVQYDRSLLVADPR 370
VDIRV +G + + +ISKAL+A+YQKYVDEASKKEI DIL+QYDR+LLVADPR
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPR 125
Query: 371 RCEPKKFGGPGARARYQKSYR 433
RCE KKFGGPGARARYQKSYR
Sbjct: 126 RCESKKFGGPGARARYQKSYR 146
>UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|Rep:
Ribosomal protein S16 - Ixodes scapularis (Black-legged
tick) (Deer tick)
Length = 148
Score = 214 bits (522), Expect = 1e-54
Identities = 101/143 (70%), Positives = 120/143 (83%)
Frame = +2
Query: 5 REPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEHRLLQYKLQEPILLLGKEKF 184
+E IQ+VQV GRKKTATAVAYCKRG+G+L+VNGRPL+ +E L+YKL EPILLLGKE+F
Sbjct: 6 KEAIQSVQVLGRKKTATAVAYCKRGNGLLKVNGRPLENIEPLTLRYKLLEPILLLGKERF 65
Query: 185 SMVDIRVTSQGWWSCSTSLRYQTTISKALIAFYQKYVDEASKKEITDILVQYDRSLLVAD 364
+ VDIR+ +G + + + ISKAL+A+YQKYVDE SKKEI D L+QYDR+LLVAD
Sbjct: 66 AGVDIRIRVKGGGNVAQIYAIRQAISKALVAYYQKYVDEQSKKEIKDTLIQYDRTLLVAD 125
Query: 365 PRRCEPKKFGGPGARARYQKSYR 433
PRRCEPKKFGGPGARARYQKSYR
Sbjct: 126 PRRCEPKKFGGPGARARYQKSYR 148
>UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87;
Eukaryota|Rep: 40S ribosomal protein S16 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 143
Score = 161 bits (392), Expect = 7e-39
Identities = 75/140 (53%), Positives = 102/140 (72%)
Frame = +2
Query: 14 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEHRLLQYKLQEPILLLGKEKFSMV 193
+ +VQ FG+KK+ATAVA+ K G G+++VNG P+ LVE +L++K+ EP+LL+G +KFS +
Sbjct: 4 VPSVQTFGKKKSATAVAHVKAGKGLIKVNGSPITLVEPEILRFKVYEPLLLVGLDKFSNI 63
Query: 194 DIRVTSQGWWSCSTSLRYQTTISKALIAFYQKYVDEASKKEITDILVQYDRSLLVADPRR 373
DIRV G S + I+K L+A++QKYVDE SK E+ YDR+LL+AD RR
Sbjct: 64 DIRVRVTGGGHVSQVYAIRQAIAKGLVAYHQKYVDEQSKNELKKAFTSYDRTLLIADSRR 123
Query: 374 CEPKKFGGPGARARYQKSYR 433
EPKKFGG GAR+R+QKSYR
Sbjct: 124 PEPKKFGGKGARSRFQKSYR 143
>UniRef50_Q7R487 Cluster: GLP_480_84573_84097; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_480_84573_84097 - Giardia lamblia
ATCC 50803
Length = 158
Score = 118 bits (284), Expect = 9e-26
Identities = 62/137 (45%), Positives = 85/137 (62%)
Frame = +2
Query: 23 VQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEHRLLQYKLQEPILLLGKEKFSMVDIR 202
V G+KK + AVA+ K G G + VN PL LV +L+ K+ EPI++LG+ F +D+
Sbjct: 25 VHTLGKKKNSVAVAFVKAGKGDILVNNVPLALVRPEILRTKVSEPIMILGESLFKGLDMN 84
Query: 203 VTSQGWWSCSTSLRYQTTISKALIAFYQKYVDEASKKEITDILVQYDRSLLVADPRRCEP 382
+ G S + IS+ ++A + DEA++ E+ LV YDR L+V+DPRRCE
Sbjct: 85 IKVAGGGHVSQIYAVRQAISRGVLASVK---DEAARSELRAKLVSYDRQLVVSDPRRCEA 141
Query: 383 KKFGGPGARARYQKSYR 433
KKFGG GARAR QKSYR
Sbjct: 142 KKFGGRGARARRQKSYR 158
>UniRef50_Q5AQG2 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 155
Score = 117 bits (281), Expect = 2e-25
Identities = 56/94 (59%), Positives = 69/94 (73%)
Frame = +2
Query: 152 EPILLLGKEKFSMVDIRVTSQGWWSCSTSLRYQTTISKALIAFYQKYVDEASKKEITDIL 331
EP+L++G +KF+ VDIRV G S + I+K+L+A+YQKYVDE SK ++
Sbjct: 62 EPVLIVGADKFAGVDIRVRVTGGGHTSQVYAIRQAIAKSLVAYYQKYVDEHSKNQLKQAF 121
Query: 332 VQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 433
VQYDR+LLVAD RR EPKKFGG GARARYQKSYR
Sbjct: 122 VQYDRTLLVADNRRAEPKKFGGRGARARYQKSYR 155
>UniRef50_Q4Q9A5 Cluster: 40S ribosomal protein S16, putative; n=7;
Trypanosomatidae|Rep: 40S ribosomal protein S16,
putative - Leishmania major
Length = 149
Score = 115 bits (276), Expect = 8e-25
Identities = 61/141 (43%), Positives = 85/141 (60%), Gaps = 1/141 (0%)
Frame = +2
Query: 14 IQAVQVFGRKKTATAVA-YCKRGHGMLRVNGRPLDLVEHRLLQYKLQEPILLLGKEKFSM 190
++ VQ FG+KKTA AVA K ++VNG PL + L+ K+ E I ++G + +S
Sbjct: 9 LKQVQTFGKKKTAIAVATVTKAAQCNIKVNGVPLQQILPDTLRAKIMEAITVVGSKYYSR 68
Query: 191 VDIRVTSQGWWSCSTSLRYQTTISKALIAFYQKYVDEASKKEITDILVQYDRSLLVADPR 370
+ I V G S + + I+K LIAF+QKY +E K + D + YD+ LL+ADPR
Sbjct: 69 LRIDVAVHGGGQVSQAYAARQAIAKGLIAFFQKYHNEVEKAALKDKFLAYDKFLLIADPR 128
Query: 371 RCEPKKFGGPGARARYQKSYR 433
RCEPKK+G AR R+ KSYR
Sbjct: 129 RCEPKKWGRHSARTRFTKSYR 149
>UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiella
natans|Rep: Ribosomal protein S16 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 139
Score = 112 bits (269), Expect = 6e-24
Identities = 56/138 (40%), Positives = 86/138 (62%), Gaps = 1/138 (0%)
Frame = +2
Query: 23 VQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEHRLLQYKLQEPILLLGKEKFSMVDIR 202
+Q FG+KK A A+ K+G G +++NG P++LV ++ K+ EP +LG + ++
Sbjct: 3 IQCFGKKKNAIAITTAKKGSGKIKINGVPINLVHPLDIKNKILEPFFILGSNERLNLNFD 62
Query: 203 VTSQGWWSCSTSLRYQTTISKALIAFYQKYVDEASKKEITDI-LVQYDRSLLVADPRRCE 379
+ S+G S + +ISK L+ +Y KY+ ASK + I + YD+ LL++D R E
Sbjct: 63 IFSKGGGKVSQIYAIRQSISKCLVFYYYKYIS-ASKSNLLKIKYLTYDKKLLISDVSRIE 121
Query: 380 PKKFGGPGARARYQKSYR 433
PKK+GG GARAR+QKSYR
Sbjct: 122 PKKYGGLGARARFQKSYR 139
>UniRef50_Q8SSC2 Cluster: 40S RIBOSOMAL PROTEIN S16; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S16
- Encephalitozoon cuniculi
Length = 145
Score = 106 bits (254), Expect = 4e-22
Identities = 57/141 (40%), Positives = 82/141 (58%), Gaps = 1/141 (0%)
Frame = +2
Query: 14 IQAVQVFGRKKTATAVAYCKR-GHGMLRVNGRPLDLVEHRLLQYKLQEPILLLGKEKFSM 190
+++V G+KK A A C + G +R+N P L+ + L+ KL+E I ++ +
Sbjct: 5 VKSVTTQGKKKRAVATCVCTQTGEFSIRINKVPFKLITNTLMIAKLKEIICIVEQANIKD 64
Query: 191 VDIRVTSQGWWSCSTSLRYQTTISKALIAFYQKYVDEASKKEITDILVQYDRSLLVADPR 370
+ +T + S + +KA++AFY Y DE K+EI L+ +DR LVAD R
Sbjct: 65 LSFDITCKIGGDVSRVYAVRMAFAKAILAFYGTYFDEWKKQEIQKRLLDFDRFSLVADSR 124
Query: 371 RCEPKKFGGPGARARYQKSYR 433
+ EPKKFGGPGARARYQKSYR
Sbjct: 125 KREPKKFGGPGARARYQKSYR 145
>UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4;
Archaea|Rep: 30S ribosomal protein S9P - Pyrococcus
horikoshii
Length = 135
Score = 91.9 bits (218), Expect = 9e-18
Identities = 50/142 (35%), Positives = 86/142 (60%), Gaps = 2/142 (1%)
Frame = +2
Query: 14 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEHRLLQYKLQEPILLLGKEKFSMV 193
++ +Q G++KTA A A + G G +R+NG+P++++E + ++ + EP++L G+E ++ V
Sbjct: 1 MRIIQTTGKRKTAIARAVIREGRGRVRINGKPVEIIEPEIARFTILEPLILAGEEIWNSV 60
Query: 194 DIRVTSQGWWSCSTSLRYQTTISKALIAFYQKYVDEASKKEITDILVQYDRSLLVADPRR 373
DI V QG + + I++AL+ ++ + + KE ++YDR++LV DPRR
Sbjct: 61 DIDVKVQGGGFMGQAEAARIAIARALV----EWTGDMNLKE---KFIKYDRTMLVGDPRR 113
Query: 374 CEPKK--FGGPGARARYQKSYR 433
EP K G RA+ QKSYR
Sbjct: 114 TEPHKPNRSTKGPRAKRQKSYR 135
>UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 199
Score = 91.5 bits (217), Expect = 1e-17
Identities = 45/83 (54%), Positives = 56/83 (67%)
Frame = +2
Query: 185 SMVDIRVTSQGWWSCSTSLRYQTTISKALIAFYQKYVDEASKKEITDILVQYDRSLLVAD 364
S VDIR+ G + S + I+K+L+A+Y KY D AS E+ + V YDR+LL+AD
Sbjct: 117 STVDIRLRVSGGGATSQIYAIRQAIAKSLVAYYAKYYDAASALELRQLFVAYDRTLLIAD 176
Query: 365 PRRCEPKKFGGPGARARYQKSYR 433
RR EPKKFGG GARAR QKSYR
Sbjct: 177 TRRSEPKKFGGHGARARRQKSYR 199
Score = 75.8 bits (178), Expect = 6e-13
Identities = 30/56 (53%), Positives = 48/56 (85%)
Frame = +2
Query: 20 AVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEHRLLQYKLQEPILLLGKEKFS 187
+V FG+KKTATAVA+CK G G++R+NG+P+ LV+ +L++K+ EP+L++G++KFS
Sbjct: 5 SVSCFGKKKTATAVAHCKEGKGLIRLNGQPISLVQPEILRWKVFEPVLVVGEDKFS 60
>UniRef50_Q9YB48 Cluster: 30S ribosomal protein S9P; n=10;
Thermoprotei|Rep: 30S ribosomal protein S9P - Aeropyrum
pernix
Length = 151
Score = 85.4 bits (202), Expect = 8e-16
Identities = 47/142 (33%), Positives = 83/142 (58%), Gaps = 9/142 (6%)
Frame = +2
Query: 35 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEHRLLQYKLQEPILLLGKEKFSMVDIRVTSQ 214
G++K A A A + G G + +NG PL++ + + K+ EP+L+ G+ S+VDIRV +
Sbjct: 11 GKRKRAIARAVIRPGRGRVWINGVPLEIYPIEMARIKMMEPLLIAGEGVRSLVDIRVRVE 70
Query: 215 GWWSCSTSLRYQTTISKALIAFYQ---------KYVDEASKKEITDILVQYDRSLLVADP 367
G + + I++ L+ F++ + +D+ S +++ +++DR++LV DP
Sbjct: 71 GGGVMGQADAVRMAIARGLVEFFRCEESDDELCRMMDKIS-RDLRTAFLEHDRTMLVGDP 129
Query: 368 RRCEPKKFGGPGARARYQKSYR 433
RR EP+K+ AR R+QKSYR
Sbjct: 130 RRTEPEKYMRYSARRRWQKSYR 151
>UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089,
moderately similar to 40S RIBOSOMAL PROTEIN S16; n=2;
Homo sapiens|Rep: CDNA FLJ40618 fis, clone THYMU2013089,
moderately similar to 40S RIBOSOMAL PROTEIN S16 - Homo
sapiens (Human)
Length = 178
Score = 79.8 bits (188), Expect = 4e-14
Identities = 47/108 (43%), Positives = 64/108 (59%)
Frame = +2
Query: 14 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEHRLLQYKLQEPILLLGKEKFSMV 193
+Q+VQ+F K+ A AV C+ G G +R+N PL+++ LQYKL E LLL KE+ + +
Sbjct: 18 LQSVQIFTYKEMAIAVVLCRCGSGFIRMNEGPLEMIRLLTLQYKLLELGLLLDKEQLAGM 77
Query: 194 DIRVTSQGWWSCSTSLRYQTTISKALIAFYQKYVDEASKKEITDILVQ 337
DI V +G ISKAL+ Y KYVDEAS +EI D L +
Sbjct: 78 DIHVRVKGSGHVVQIYAVLQYISKALVPCYPKYVDEAS-EEIKDTLTR 124
>UniRef50_A0RXP4 Cluster: 30S ribosomal protein S9P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S9P -
Cenarchaeum symbiosum
Length = 149
Score = 77.0 bits (181), Expect = 3e-13
Identities = 46/141 (32%), Positives = 75/141 (53%), Gaps = 7/141 (4%)
Frame = +2
Query: 32 FGRKKTATAVAYCKRGHGMLRVNGRPLDLVEHRLLQYKLQEPILLLGKEKFSMVDIRVTS 211
F +K A+A Y +G G +R+N P +++ H + + P+ + G + VDI V
Sbjct: 10 FATRKAASAHVYIIKGTGRVRINNVPAEMIVHESAREAILAPLDIAGDAR-KKVDISVRV 68
Query: 212 QGWWSCSTSLRYQTTISKALIAFYQKY-------VDEASKKEITDILVQYDRSLLVADPR 370
+G + T IS+ALI + + + + +++++ + +D+ L+ D R
Sbjct: 69 KGGGFMGQAGASATGISRALIGWTKSRREPRNHPLTKTAREDLRKRIGDFDKYLISGDAR 128
Query: 371 RCEPKKFGGPGARARYQKSYR 433
R EPKKFGGPGAR R QKSYR
Sbjct: 129 RKEPKKFGGPGARRRKQKSYR 149
>UniRef50_Q1NYV6 Cluster: 30S ribosomal protein S9; n=1; Candidatus
Sulcia muelleri str. Hc (Homalodisca coagulata)|Rep: 30S
ribosomal protein S9 - Candidatus Sulcia muelleri str.
Hc (Homalodisca coagulata)
Length = 132
Score = 52.8 bits (121), Expect = 5e-06
Identities = 44/139 (31%), Positives = 69/139 (49%), Gaps = 2/139 (1%)
Frame = +2
Query: 23 VQVFGRKKTATAVAYCKRGHGMLRVNGRPL-DLVEHRLLQYKLQEPILL-LGKEKFSMVD 196
+ GR+KTA A Y K G G+++VN P + + LL K+ +P+LL + KF
Sbjct: 8 IHTIGRRKTAVARMYMKIGSGLIKVNNIPYKNYFNNNLLFNKISKPLLLTYNQNKFDFY- 66
Query: 197 IRVTSQGWWSCSTSLRYQTTISKALIAFYQKYVDEASKKEITDILVQYDRSLLVADPRRC 376
I+V+ G S + ++ IS+AL F +I + +++LL DPR
Sbjct: 67 IKVSGGGINSQAEAI--SLAISRALCKF-----------DINHKPILKEQNLLTRDPRMV 113
Query: 377 EPKKFGGPGARARYQKSYR 433
E KK+G +R +Q S R
Sbjct: 114 ERKKYGKKKSRKNFQFSKR 132
>UniRef50_UPI0000DA28A7 Cluster: PREDICTED: similar to ribosomal
protein S16; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S16 - Rattus norvegicus
Length = 102
Score = 46.4 bits (105), Expect = 4e-04
Identities = 29/70 (41%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Frame = +2
Query: 11 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNG-RPLDLVEHRLLQYKLQEPILLLGKEKFS 187
P+Q+ QVFG KK A +A +G +++V L++ E QY+L +PIL LGKE+F+
Sbjct: 25 PLQSKQVFGCKKKA--IAMHAKGKWLIKVTDVHLLEMTEPVKQQYQLLDPILPLGKERFA 82
Query: 188 MVDIRVTSQG 217
V I V G
Sbjct: 83 RVGIWVRVNG 92
>UniRef50_A6DDR0 Cluster: 30S ribosomal protein S9; n=1;
Caminibacter mediatlanticus TB-2|Rep: 30S ribosomal
protein S9 - Caminibacter mediatlanticus TB-2
Length = 144
Score = 45.6 bits (103), Expect = 8e-04
Identities = 25/88 (28%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Frame = +2
Query: 35 GRKKTATAVAYCKRGHGMLRVNGRPLD--LVEHRLLQYKLQEPILLLGKEKFSMVDIRVT 208
G++K A A + K G G + VNG+PLD L L+ +++ P++L+ +E ++++V
Sbjct: 11 GKRKEAVAKVWLKNGSGNITVNGKPLDEFLGGREALKLRVRWPLMLVKQEGNFDIEVKVL 70
Query: 209 SQGWWSCSTSLRYQTTISKALIAFYQKY 292
G+ + + ++++ ISKAL+ + ++
Sbjct: 71 GGGFAAQADAIKH--GISKALVEYAPEF 96
>UniRef50_Q83AX9 Cluster: 30S ribosomal protein S9; n=101;
Bacteria|Rep: 30S ribosomal protein S9 - Coxiella
burnetii
Length = 139
Score = 45.2 bits (102), Expect = 0.001
Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 1/134 (0%)
Frame = +2
Query: 35 GRKKTATAVAYCKRGHGMLRVNGRPLD-LVEHRLLQYKLQEPILLLGKEKFSMVDIRVTS 211
GR+KT++A + + G G + +NG PLD + +++P++ L + S D+ T
Sbjct: 13 GRRKTSSARVFLRSGTGQIIINGLPLDEYFGRETARMVVRQPLVKLDVQ--SRFDVYATV 70
Query: 212 QGWWSCSTSLRYQTTISKALIAFYQKYVDEASKKEITDILVQYDRSLLVADPRRCEPKKF 391
QG + + I++ALI + DE + T + DPR E KK
Sbjct: 71 QGGGDSGQAGAIRHGITRALIQY-----DEEGGEGGTWRSTLRKAGFVTRDPRMVERKKV 125
Query: 392 GGPGARARYQKSYR 433
G GAR Q S R
Sbjct: 126 GLHGARRGTQFSKR 139
>UniRef50_A3CEI4 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 61
Score = 44.4 bits (100), Expect = 0.002
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +2
Query: 5 REPIQAVQVFGRKKTATAVAYCKRGHGMLRV 97
R P VQ FGRKKTA AV+YCK G G+++V
Sbjct: 7 RPPPGTVQCFGRKKTAVAVSYCKPGRGLIKV 37
>UniRef50_Q6F0X3 Cluster: 30S ribosomal protein S9; n=19;
Bacteria|Rep: 30S ribosomal protein S9 - Mesoplasma
florum (Acholeplasma florum)
Length = 131
Score = 43.2 bits (97), Expect = 0.004
Identities = 42/134 (31%), Positives = 62/134 (46%), Gaps = 1/134 (0%)
Frame = +2
Query: 35 GRKKTATAVAYCKRGHGMLRVNGRP-LDLVEHRLLQYKLQEPILLLGKEKFSMVDIRVTS 211
GR+KT+ A G G + VNG P L+ + L L++P++ G EK DI VT
Sbjct: 11 GRRKTSVAQVILTPGKGNIIVNGVPALEFFPYPTLVQDLEQPLVATGTEK--DFDITVTV 68
Query: 212 QGWWSCSTSLRYQTTISKALIAFYQKYVDEASKKEITDILVQYDRSLLVADPRRCEPKKF 391
+G + + I++AL+ + Y +K + + LL D R E KK+
Sbjct: 69 KGGGFTGQAGATRLGIARALLVASEDY-----RKGLRAV------GLLTRDARIKERKKY 117
Query: 392 GGPGARARYQKSYR 433
G GAR Q S R
Sbjct: 118 GLRGARRAPQYSKR 131
>UniRef50_O51313 Cluster: 30S ribosomal protein S9; n=87; cellular
organisms|Rep: 30S ribosomal protein S9 - Borrelia
burgdorferi (Lyme disease spirochete)
Length = 136
Score = 41.9 bits (94), Expect = 0.009
Identities = 37/134 (27%), Positives = 59/134 (44%), Gaps = 1/134 (0%)
Frame = +2
Query: 35 GRKKTATAVAYCKRGHGMLRVNGRPLD-LVEHRLLQYKLQEPILLLGKEKFSMVDIRVTS 211
GR+K++ A Y + G G ++VN R D ++ L+ P++L D+ +
Sbjct: 16 GRRKSSVARVYIREGSGNIKVNNRDFDSYIQLENLRTMALSPLVL--TNTLGKYDLYINV 73
Query: 212 QGWWSCSTSLRYQTTISKALIAFYQKYVDEASKKEITDILVQYDRSLLVADPRRCEPKKF 391
G S + IS+AL +DE++K ++ L D R+ E KKF
Sbjct: 74 YGGGISGQSGAIRHGISRALFK-----LDESNK------MILRSNGFLTRDSRKVERKKF 122
Query: 392 GGPGARARYQKSYR 433
G AR +Q S R
Sbjct: 123 GQKKARKSFQFSKR 136
>UniRef50_A6C0N9 Cluster: 30S ribosomal protein S9; n=1;
Planctomyces maris DSM 8797|Rep: 30S ribosomal protein
S9 - Planctomyces maris DSM 8797
Length = 201
Score = 40.3 bits (90), Expect = 0.028
Identities = 40/134 (29%), Positives = 57/134 (42%), Gaps = 1/134 (0%)
Frame = +2
Query: 35 GRKKTATAVAYCKRGHGMLRVNGRPL-DLVEHRLLQYKLQEPILLLGKEKFSMVDIRVTS 211
GR+KTA A K G G L +NG+ L D + + ++ P L E F VD+ V
Sbjct: 81 GRRKTAVARVRIKAGSGSLTINGQSLNDYLRVERDRQMVEAP--LKATETFGKVDVWVRV 138
Query: 212 QGWWSCSTSLRYQTTISKALIAFYQKYVDEASKKEITDILVQYDRSLLVADPRRCEPKKF 391
G + + I++AL A+ ++ + S L D R E KKF
Sbjct: 139 TGGGTTGQTGAIVLGIARALEAYNNQFHETLSAGR-----------FLTRDSRMVERKKF 187
Query: 392 GGPGARARYQKSYR 433
G AR +Q S R
Sbjct: 188 GFKKARKSFQFSKR 201
>UniRef50_A5WDK8 Cluster: Ribosomal protein S9; n=2;
Proteobacteria|Rep: Ribosomal protein S9 - Psychrobacter
sp. PRwf-1
Length = 128
Score = 39.9 bits (89), Expect = 0.038
Identities = 40/134 (29%), Positives = 61/134 (45%), Gaps = 1/134 (0%)
Frame = +2
Query: 35 GRKKTATAVAYCKRGHGMLRVNGRPLD-LVEHRLLQYKLQEPILLLGKEKFSMVDIRVTS 211
GR+KT+TA + +G G + VNG+PLD + +++P+ LL + DI T
Sbjct: 8 GRRKTSTARVFLSKGTGNIVVNGKPLDEYFGRETSRMVVRQPLELL--DSAETYDIYATV 65
Query: 212 QGWWSCSTSLRYQTTISKALIAFYQKYVDEASKKEITDILVQYDRSLLVADPRRCEPKKF 391
+G + + I++ALI DE K + + + D R+ E KK
Sbjct: 66 KGGGINGQAGAIRHGITRALIE-----SDETLKPALK------EAGFVTRDSRQVERKKL 114
Query: 392 GGPGARARYQKSYR 433
G AR R Q S R
Sbjct: 115 GLRKARKRPQFSKR 128
>UniRef50_Q9X1G4 Cluster: 30S ribosomal protein S9; n=9;
Bacteria|Rep: 30S ribosomal protein S9 - Thermotoga
maritima
Length = 134
Score = 39.9 bits (89), Expect = 0.038
Identities = 43/138 (31%), Positives = 64/138 (46%), Gaps = 5/138 (3%)
Frame = +2
Query: 35 GRKKTATAVAYCKRGHGMLRVNGRPL----DLVEHRLLQYKLQEPILLLGK-EKFSMVDI 199
GR+KTA A Y + G G ++VNG+ D ++ EP+ + KF +V I
Sbjct: 11 GRRKTAVARVYLRPGEGKVKVNGKEYESLNDYFKNPAWTKHAIEPLEVTNTLGKFDLV-I 69
Query: 200 RVTSQGWWSCSTSLRYQTTISKALIAFYQKYVDEASKKEITDILVQYDRSLLVADPRRCE 379
RV G S ++R I++AL+ + Q + +L +Y +L DPR E
Sbjct: 70 RVNGGGLSGQSGAVR--LGIARALLQYDQ---------NLRPVLKKY--KMLTRDPREVE 116
Query: 380 PKKFGGPGARARYQKSYR 433
KK+G AR Q S R
Sbjct: 117 RKKYGLKKARRAPQFSKR 134
>UniRef50_O14006 Cluster: 40S ribosomal protein S9, mitochondrial
precursor; n=1; Schizosaccharomyces pombe|Rep: 40S
ribosomal protein S9, mitochondrial precursor -
Schizosaccharomyces pombe (Fission yeast)
Length = 132
Score = 39.1 bits (87), Expect = 0.066
Identities = 35/128 (27%), Positives = 54/128 (42%)
Frame = +2
Query: 35 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEHRLLQYKLQEPILLLGKEKFSMVDIRVTSQ 214
G++K++ A G G VNG P D+ R++ K L + + ++ T
Sbjct: 12 GKRKSSKATVKMLPGTGKFYVNGSPFDVYFQRMVHRK-HAVYPLAACNRLTNYNVWATVH 70
Query: 215 GWWSCSTSLRYQTTISKALIAFYQKYVDEASKKEITDILVQYDRSLLVADPRRCEPKKFG 394
G S ISK+LI + E S K++ D ++ D R+ E KK G
Sbjct: 71 GGGPTGQSGAVHAAISKSLI------LQEPSLKQVIK-----DTHCVLNDKRKVERKKTG 119
Query: 395 GPGARARY 418
P AR +Y
Sbjct: 120 QPKARKKY 127
>UniRef50_Q8F0T3 Cluster: 30S ribosomal protein S9; n=8;
Bacteria|Rep: 30S ribosomal protein S9 - Leptospira
interrogans
Length = 139
Score = 38.3 bits (85), Expect = 0.11
Identities = 39/144 (27%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
Frame = +2
Query: 11 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPL-DLVEHR--LLQYKLQEPILLLGKEK 181
P + + GR+KT+ A A K G G + VN + + D +++R +++ ++ LL ++K
Sbjct: 10 PAKEIWAVGRRKTSVARAKIKEGSGKITVNHKDIKDYLQNRKAIIEEAIRPLSLLNVQDK 69
Query: 182 FSMVDIRVTSQGWWSCSTSLRYQTTISKALIAFYQKYVDEASKKEITDILVQYDRSLLVA 361
+ + ++ VT G ++R+ +++A+ ++ A KKE L
Sbjct: 70 YDL-NLNVTGGGTTGQVGAIRH--ALARAICRIKPEF-RPAVKKE----------GFLTR 115
Query: 362 DPRRCEPKKFGGPGARARYQKSYR 433
DPR E KK+G AR Q S R
Sbjct: 116 DPRMVERKKYGLHKARRGTQFSKR 139
>UniRef50_A6KZT0 Cluster: Putative outer membrane protein, probably
involved in nutrient binding; n=1; Bacteroides vulgatus
ATCC 8482|Rep: Putative outer membrane protein, probably
involved in nutrient binding - Bacteroides vulgatus
(strain ATCC 8482 / DSM 1447 / NCTC 11154)
Length = 493
Score = 36.3 bits (80), Expect = 0.46
Identities = 22/78 (28%), Positives = 35/78 (44%)
Frame = +2
Query: 128 RLLQYKLQEPILLLGKEKFSMVDIRVTSQGWWSCSTSLRYQTTISKALIAFYQKYVDEAS 307
R Q EP++LLG + ++ +GW + Y++ + KA FYQKY +
Sbjct: 326 RYYQTPTNEPMVLLGYVEQQLILAEAVVRGWIQGDDKIYYESAV-KASFEFYQKYAVSVA 384
Query: 308 KKEITDILVQYDRSLLVA 361
D +Y R+ VA
Sbjct: 385 DYLTQDAAAEYLRNDKVA 402
>UniRef50_Q8FS19 Cluster: 30S ribosomal protein S9; n=32;
Bacteria|Rep: 30S ribosomal protein S9 - Corynebacterium
efficiens
Length = 182
Score = 36.3 bits (80), Expect = 0.46
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = +2
Query: 35 GRKKTATAVAYCKRGHGMLRVNGRPL-DLVEHRLLQYKLQEPILLLGKEKFSMVDIRVTS 211
GR+K A G G + NGR L D ++L Q ++ P++LLG+E DI
Sbjct: 62 GRRKRAIVRVRMVAGSGEITCNGRTLEDYFPNKLHQQLIKAPLVLLGRE--GQFDIHANL 119
Query: 212 QGWWSCSTSLRYQTTISKALIAF 280
G + ++ I++AL A+
Sbjct: 120 GGGGPTGQAGAFRLAIARALNAY 142
>UniRef50_Q9PKR2 Cluster: 30S ribosomal protein S9; n=3;
Chlamydia|Rep: 30S ribosomal protein S9 - Chlamydia
muridarum
Length = 133
Score = 36.3 bits (80), Expect = 0.46
Identities = 37/144 (25%), Positives = 63/144 (43%), Gaps = 1/144 (0%)
Frame = +2
Query: 5 REPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLD-LVEHRLLQYKLQEPILLLGKEK 181
+ IQ GR+K A + + G+G + VNG+ L+ + + + P+ +LG
Sbjct: 3 KNTIQESVATGRRKQAVSSVRLRSGNGKIDVNGKTLEQYFPLEVQRATILAPLKMLGDVN 62
Query: 182 FSMVDIRVTSQGWWSCSTSLRYQTTISKALIAFYQKYVDEASKKEITDILVQYDRSLLVA 361
+ IRV+ G ++ Q ++ +A E K+E+ + L
Sbjct: 63 SFDLIIRVSGGG-------VQGQVIATRLGLARAVLQEKEDMKQELKS------QGFLTR 109
Query: 362 DPRRCEPKKFGGPGARARYQKSYR 433
DPR+ E KK+G AR +Q S R
Sbjct: 110 DPRKKERKKYGRKKARKSFQFSKR 133
>UniRef50_A1SL17 Cluster: Glycosyl transferase, group 1; n=1;
Nocardioides sp. JS614|Rep: Glycosyl transferase, group
1 - Nocardioides sp. (strain BAA-499 / JS614)
Length = 384
Score = 34.3 bits (75), Expect = 1.9
Identities = 27/99 (27%), Positives = 46/99 (46%)
Frame = +2
Query: 71 KRGHGMLRVNGRPLDLVEHRLLQYKLQEPILLLGKEKFSMVDIRVTSQGWWSCSTSLRYQ 250
K H + V GR LV H+ +++ + L+ E+F + +RV GWW
Sbjct: 193 KSAHPSICVVGR---LVPHKQVEHAIDAVATLV--EEFPDLRLRVVGSGWWEGELRAYAA 247
Query: 251 TTISKALIAFYQKYVDEASKKEITDILVQYDRSLLVADP 367
+++ + F + +V E K+EI Y+ S L+A P
Sbjct: 248 EQVARGSVVF-EGHVSEVRKQEI------YEESWLMALP 279
>UniRef50_Q8SXF0 Cluster: RH44312p; n=5; Diptera|Rep: RH44312p -
Drosophila melanogaster (Fruit fly)
Length = 395
Score = 34.3 bits (75), Expect = 1.9
Identities = 34/127 (26%), Positives = 54/127 (42%), Gaps = 1/127 (0%)
Frame = +2
Query: 41 KKTATA-VAYCKRGHGMLRVNGRPLDLVEHRLLQYKLQEPILLLGKEKFSMVDIRVTSQG 217
+KTA A V G G + +NG+ + E + +L P+ E VD+ +G
Sbjct: 276 RKTARADVTVRLPGTGKISINGKDISYFEDENCREQLLFPLQF--SELLGKVDVEANVEG 333
Query: 218 WWSCSTSLRYQTTISKALIAFYQKYVDEASKKEITDILVQYDRSLLVADPRRCEPKKFGG 397
+ + I+ +L +F + + E+ + LL D RR E KKFG
Sbjct: 334 GGPSGQAGAIRWGIAMSLRSFVDQEMIESMRLA----------GLLTRDYRRRERKKFGQ 383
Query: 398 PGARARY 418
GAR +Y
Sbjct: 384 EGARRKY 390
>UniRef50_Q00VS8 Cluster: Chromosome 14 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 14 contig 1, DNA
sequence - Ostreococcus tauri
Length = 531
Score = 33.5 bits (73), Expect = 3.3
Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 5/46 (10%)
Frame = -1
Query: 155 VPEVCTAAVCAQPSP---MDARLHAAFHD--HACNTQLRWRFSYVR 33
VPE C AVCA + DA LH A H +A RW + Y R
Sbjct: 403 VPETCLIAVCASENASEVQDALLHEAMHGLWYAREDHARWCYDYYR 448
>UniRef50_A5K195 Cluster: 30S ribosomal protein S9, putative; n=5;
Plasmodium|Rep: 30S ribosomal protein S9, putative -
Plasmodium vivax
Length = 604
Score = 33.5 bits (73), Expect = 3.3
Identities = 37/135 (27%), Positives = 59/135 (43%), Gaps = 2/135 (1%)
Frame = +2
Query: 35 GRKKTATAVAYCKRGHGMLRVNGRP-LDLVEHRLLQY-KLQEPILLLGKEKFSMVDIRVT 208
G+KK A A+ + +RG+ L +N R +++++ K+ P+L L + V RV
Sbjct: 482 GKKKRAVAMVFLQRGNNNLIINNRDGYQYLQYQIFNINKIFSPLLHLCMHRHFNVVARVV 541
Query: 209 SQGWWSCSTSLRYQTTISKALIAFYQKYVDEASKKEITDILVQYDRSLLVADPRRCEPKK 388
G S + I AL+ KY+ +I + + D R+ E KK
Sbjct: 542 GGGLSGQSVA------IFHALV----KYIVYNLSLKIKPYFRSF--KFMTVDSRKVERKK 589
Query: 389 FGGPGARARYQKSYR 433
+G AR R Q S R
Sbjct: 590 YGLKKARKRKQYSKR 604
>UniRef50_Q28VM5 Cluster: Negative transcriptional regulator; n=2;
Rhodobacteraceae|Rep: Negative transcriptional regulator
- Jannaschia sp. (strain CCS1)
Length = 217
Score = 33.1 bits (72), Expect = 4.3
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +2
Query: 32 FGRKKTATAVAYC-KRGHGMLRVNGRPLDLVEH 127
F ++ T VA C KRG GML VNG P ++ H
Sbjct: 7 FRQEPVFTNVAMCQKRGFGMLSVNGDPAPMISH 39
>UniRef50_A6LJZ1 Cluster: Nicotinate (Nicotinamide) nucleotide
adenylyltransferase; n=1; Thermosipho melanesiensis
BI429|Rep: Nicotinate (Nicotinamide) nucleotide
adenylyltransferase - Thermosipho melanesiensis BI429
Length = 197
Score = 33.1 bits (72), Expect = 4.3
Identities = 20/89 (22%), Positives = 39/89 (43%)
Frame = +2
Query: 92 RVNGRPLDLVEHRLLQYKLQEPILLLGKEKFSMVDIRVTSQGWWSCSTSLRYQTTISKAL 271
+V G + +EHRL + ++K+S + V +S RY+ + KA
Sbjct: 67 KVEGITVSDIEHRLGGVSYAINTIEYYEKKYSHIFFLVGEDALYSIEKWYRYEDILKKAH 126
Query: 272 IAFYQKYVDEASKKEITDILVQYDRSLLV 358
+ Y ++ DE K++ +L S+ +
Sbjct: 127 MLVYPRFKDELVYKKVERVLESLSNSIYI 155
>UniRef50_Q4TB52 Cluster: Chromosome 13 SCAF7203, whole genome shotgun
sequence; n=1; Tetraodon nigroviridis|Rep: Chromosome 13
SCAF7203, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1946
Score = 32.7 bits (71), Expect = 5.7
Identities = 21/80 (26%), Positives = 36/80 (45%)
Frame = +2
Query: 119 VEHRLLQYKLQEPILLLGKEKFSMVDIRVTSQGWWSCSTSLRYQTTISKALIAFYQKYVD 298
V+ LL +QE K ++ ++ RV W C L+ +A F+Q V+
Sbjct: 1197 VQQLLLSQLVQEADAQRSKRQWGRLETRVAF--WKRCHQRLKGDGADPEAAFGFFQAQVE 1254
Query: 299 EASKKEITDILVQYDRSLLV 358
+ E ++L +RSLL+
Sbjct: 1255 PGGRSEAEELLDVQERSLLL 1274
>UniRef50_P82933 Cluster: 28S ribosomal protein S9, mitochondrial
precursor; n=29; Euteleostomi|Rep: 28S ribosomal protein
S9, mitochondrial precursor - Homo sapiens (Human)
Length = 396
Score = 32.7 bits (71), Expect = 5.7
Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 3/131 (2%)
Frame = +2
Query: 35 GRKKTATAVAYC-KRGHGMLRVNGRPLDLVEHRLLQYKLQEPILLLGKEKFSMVDIRVTS 211
G++KTA A A K G G ++VNG L + Q + Q ++ D+ T
Sbjct: 274 GKRKTAKAEAIVYKHGSGRIKVNGIDYQLY-FPITQDREQLMFPFHFVDRLGKHDVTCTV 332
Query: 212 QGWWSCSTSLRYQTTISKALIAFYQKYVDEASKKEITDILVQYDRS--LLVADPRRCEPK 385
G + + + ++KAL +F +T+ V++ R LL DPR E K
Sbjct: 333 SGGGRSAQAGAIRLAMAKALCSF------------VTEDEVEWMRQAGLLTTDPRVRERK 380
Query: 386 KFGGPGARARY 418
K G GAR ++
Sbjct: 381 KPGQEGARRKF 391
>UniRef50_P47656 Cluster: 30S ribosomal protein S9; n=5;
Firmicutes|Rep: 30S ribosomal protein S9 - Mycoplasma
genitalium
Length = 132
Score = 32.7 bits (71), Expect = 5.7
Identities = 39/137 (28%), Positives = 60/137 (43%), Gaps = 4/137 (2%)
Frame = +2
Query: 35 GRKKTATAVAYC--KRGHGMLRVNGR-PLDLVEHRLLQYKLQEPILLLG-KEKFSMVDIR 202
GR+K++TA Y + G + +N R P D ++L+ +++P+ L K+ F DI
Sbjct: 10 GRRKSSTAKVYLYQSKDKGKITINHRNPSDYFPNKLVIQDMEQPLELTKLKDNF---DIN 66
Query: 203 VTSQGWWSCSTSLRYQTTISKALIAFYQKYVDEASKKEITDILVQYDRSLLVADPRRCEP 382
V +G + + I +ALI F K++T D R E
Sbjct: 67 VVVKGGGFTGQAGAIRLGIVRALIKFNPDLKKLLKTKKLT-----------TRDKRAKER 115
Query: 383 KKFGGPGARARYQKSYR 433
KKFG GAR Q + R
Sbjct: 116 KKFGLYGARRAPQFTKR 132
>UniRef50_A2Y5Y5 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 524
Score = 32.3 bits (70), Expect = 7.5
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +2
Query: 368 RRCEPKKFGGPGARARYQKSYR*AFNETIGWYRRGGLLSLRY 493
R C P+ G R R ++ A+N + W+ R GLL L++
Sbjct: 46 RSCFPRPISTLGRRRRIRRDEGKAYNREMSWFSRFGLLRLKH 87
>UniRef50_Q86I67 Cluster: Putative uncharacterized protein; n=2;
Dictyostelium discoideum|Rep: Putative uncharacterized
protein - Dictyostelium discoideum (Slime mold)
Length = 2868
Score = 32.3 bits (70), Expect = 7.5
Identities = 19/45 (42%), Positives = 25/45 (55%)
Frame = +2
Query: 221 WSCSTSLRYQTTISKALIAFYQKYVDEASKKEITDILVQYDRSLL 355
WS S L + TISK L AF Q+ EASK++ +I + S L
Sbjct: 1227 WSESEELIREETISKKLTAFLQQEEKEASKRKEAEIRIYEHASQL 1271
>UniRef50_A0DDZ1 Cluster: Chromosome undetermined scaffold_47, whole
genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_47, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 1154
Score = 32.3 bits (70), Expect = 7.5
Identities = 15/63 (23%), Positives = 35/63 (55%)
Frame = -2
Query: 214 LTGHSDVDHREFFLAEQKDRFLKFVLQQSVLNQVQWTPVYTQHSMTTLAIRNCGGGFLTS 35
L G++ + RE +E D +K +++ + + ++WT YT+ +++ + + G F+ +
Sbjct: 856 LHGNNSITCREILFSEGIDTHIKGLIR--IFSDLEWTSKYTEENISFMRPKKIGLAFIPN 913
Query: 34 EYL 26
E L
Sbjct: 914 ESL 916
>UniRef50_O94150 Cluster: 40S ribosomal protein S9, mitochondrial
precursor; n=5; Saccharomycetales|Rep: 40S ribosomal
protein S9, mitochondrial precursor - Candida albicans
(Yeast)
Length = 336
Score = 32.3 bits (70), Expect = 7.5
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +2
Query: 38 RKKTATAVAYCKRGHGMLRVNGRPL-DLVEHRLLQYKLQEPILLLGKEKFSMVDIRVTSQ 214
++K++ A Y +G G + VNG+ L + + + L P ++ +E V +VT
Sbjct: 217 KRKSSIAKIYLVKGEGEVLVNGKSLIEFFPNIYARKNLLYPFQVVEQEGKYNVFAQVTGG 276
Query: 215 GWWSCSTSLRYQTTISKALIAF 280
G+ S ++ Y I+KAL+ F
Sbjct: 277 GYTGQSEAIMY--AIAKALVVF 296
>UniRef50_Q08PN8 Cluster: Polyketide synthase; n=1; Stigmatella
aurantiaca DW4/3-1|Rep: Polyketide synthase -
Stigmatella aurantiaca DW4/3-1
Length = 535
Score = 31.9 bits (69), Expect = 9.9
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +2
Query: 344 RSLLVADPRRCEPKKFGGPGARARY 418
RSLL P EP+ + GPGAR RY
Sbjct: 229 RSLLTEAPAPAEPEPWTGPGARVRY 253
>UniRef50_A0L8Q2 Cluster: (NiFe) hydrogenase maturation protein
HypF; n=3; Proteobacteria|Rep: (NiFe) hydrogenase
maturation protein HypF - Magnetococcus sp. (strain
MC-1)
Length = 758
Score = 31.9 bits (69), Expect = 9.9
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -1
Query: 146 VCTAAVCAQPSPMDARLHAA-FHDHACNTQLRWRFSYVRILG 24
+C A + +P+D R HA AC QL W++ +I+G
Sbjct: 156 LCKACLAEYQNPLDRRFHAQPLACPACGPQLTWQYGSEKIIG 197
>UniRef50_A7PLL5 Cluster: Chromosome chr7 scaffold_20, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr7 scaffold_20, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 651
Score = 31.9 bits (69), Expect = 9.9
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = +3
Query: 108 HWTWLSTDC--CSTNFRNLSFCSARKNSLWSTS 200
H T L DC C N LS C R +LW+TS
Sbjct: 182 HLTSLQKDCFACMPNLMRLSMCETRVANLWTTS 214
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 548,765,934
Number of Sequences: 1657284
Number of extensions: 10537757
Number of successful extensions: 27269
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 26593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27241
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35405708495
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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